Protein–RNA interactions for Protein: Q96FT9

IFT43, Intraflagellar transport protein 43 homolog, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT43Q96FT9 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
IFT43Q96FT9 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
IFT43Q96FT9 AC091951.1-201ENST00000512854 2465 ntBASIC15.6■□□□□ 0.09
IFT43Q96FT9 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC15.6■□□□□ 0.09
IFT43Q96FT9 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
IFT43Q96FT9 SYMPK-213ENST00000599460 5449 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
IFT43Q96FT9 PARN-202ENST00000420015 2360 ntTSL 2 BASIC15.6■□□□□ 0.09
IFT43Q96FT9 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
IFT43Q96FT9 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC15.6■□□□□ 0.09
IFT43Q96FT9 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC15.6■□□□□ 0.09
IFT43Q96FT9 AL162726.2-201ENST00000438986 1017 ntBASIC15.6■□□□□ 0.09
IFT43Q96FT9 GALT-202ENST00000450095 1280 ntTSL 2 BASIC15.6■□□□□ 0.09
IFT43Q96FT9 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
IFT43Q96FT9 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC15.6■□□□□ 0.09
IFT43Q96FT9 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC15.6■□□□□ 0.09
IFT43Q96FT9 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC15.6■□□□□ 0.09
IFT43Q96FT9 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC15.6■□□□□ 0.09
IFT43Q96FT9 PIGL-212ENST00000581006 554 ntTSL 4 BASIC15.6■□□□□ 0.09
IFT43Q96FT9 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC15.6■□□□□ 0.09
IFT43Q96FT9 INO80C-210ENST00000590757 595 ntTSL 2 BASIC15.6■□□□□ 0.09
IFT43Q96FT9 AC133539.2-201ENST00000604757 467 ntBASIC15.6■□□□□ 0.09
IFT43Q96FT9 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
IFT43Q96FT9 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC15.6■□□□□ 0.09
IFT43Q96FT9 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC15.6■□□□□ 0.09
IFT43Q96FT9 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
IFT43Q96FT9 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC15.6■□□□□ 0.09
IFT43Q96FT9 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
IFT43Q96FT9 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
IFT43Q96FT9 DSE-202ENST00000359564 4037 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
IFT43Q96FT9 KDM2B-201ENST00000377069 5224 ntAPPRIS ALT2 TSL 2 BASIC15.6■□□□□ 0.09
IFT43Q96FT9 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
IFT43Q96FT9 CAMKK2-209ENST00000446440 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
IFT43Q96FT9 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
IFT43Q96FT9 WASH3P-207ENST00000560956 1394 ntBASIC15.6■□□□□ 0.09
IFT43Q96FT9 NOP14-203ENST00000416614 3538 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
IFT43Q96FT9 IL21R-AS1-201ENST00000563191 2615 ntTSL 2 BASIC15.6■□□□□ 0.09
IFT43Q96FT9 AC104836.1-202ENST00000636805 6041 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
IFT43Q96FT9 TCAF1-205ENST00000479870 5733 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
IFT43Q96FT9 MSI1-201ENST00000257552 2975 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
IFT43Q96FT9 WSCD1-201ENST00000317744 5819 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
IFT43Q96FT9 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
IFT43Q96FT9 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
IFT43Q96FT9 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
IFT43Q96FT9 AC005899.8-201ENST00000625127 3153 ntTSL 5 BASIC15.59■□□□□ 0.09
IFT43Q96FT9 PPP1R26P4-201ENST00000619065 3527 ntBASIC15.59■□□□□ 0.09
IFT43Q96FT9 ZEB1-AS1-208ENST00000607166 2503 ntBASIC15.59■□□□□ 0.09
IFT43Q96FT9 TMEM200C-202ENST00000581347 10638 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
IFT43Q96FT9 ADAMTS14-201ENST00000373207 5260 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
IFT43Q96FT9 RAD51D-203ENST00000394589 2287 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
IFT43Q96FT9 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC15.59■□□□□ 0.09
IFT43Q96FT9 OS9-207ENST00000439210 1946 ntTSL 2 BASIC15.59■□□□□ 0.09
IFT43Q96FT9 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC15.59■□□□□ 0.09
IFT43Q96FT9 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
IFT43Q96FT9 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
IFT43Q96FT9 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC15.59■□□□□ 0.09
IFT43Q96FT9 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC15.59■□□□□ 0.09
IFT43Q96FT9 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC15.59■□□□□ 0.09
IFT43Q96FT9 AC022210.1-201ENST00000449856 793 ntBASIC15.59■□□□□ 0.09
IFT43Q96FT9 VDAC1P7-201ENST00000462417 847 ntBASIC15.59■□□□□ 0.09
IFT43Q96FT9 ASF1B-202ENST00000474890 765 ntTSL 2 BASIC15.59■□□□□ 0.09
IFT43Q96FT9 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC15.59■□□□□ 0.09
IFT43Q96FT9 AC004066.1-201ENST00000502488 802 ntBASIC15.59■□□□□ 0.09
IFT43Q96FT9 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC15.59■□□□□ 0.09
IFT43Q96FT9 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC15.59■□□□□ 0.09
IFT43Q96FT9 AP005482.1-201ENST00000563722 1273 ntBASIC15.59■□□□□ 0.09
IFT43Q96FT9 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC15.59■□□□□ 0.09
IFT43Q96FT9 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC15.59■□□□□ 0.09
IFT43Q96FT9 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC15.59■□□□□ 0.09
IFT43Q96FT9 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC15.59■□□□□ 0.09
IFT43Q96FT9 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC15.59■□□□□ 0.09
IFT43Q96FT9 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC15.59■□□□□ 0.09
IFT43Q96FT9 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
IFT43Q96FT9 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC15.59■□□□□ 0.09
IFT43Q96FT9 SERF2-217ENST00000630046 862 ntTSL 5 BASIC15.59■□□□□ 0.09
IFT43Q96FT9 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC15.59■□□□□ 0.09
IFT43Q96FT9 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
IFT43Q96FT9 ARHGEF26-203ENST00000465817 2353 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
IFT43Q96FT9 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC15.59■□□□□ 0.09
IFT43Q96FT9 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC15.59■□□□□ 0.09
IFT43Q96FT9 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
IFT43Q96FT9 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC15.59■□□□□ 0.09
IFT43Q96FT9 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
IFT43Q96FT9 CICP20-201ENST00000443330 2801 ntBASIC15.59■□□□□ 0.09
IFT43Q96FT9 NOX5-203ENST00000448182 2498 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
IFT43Q96FT9 ZFY-201ENST00000155093 5239 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
IFT43Q96FT9 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
IFT43Q96FT9 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC15.59■□□□□ 0.09
IFT43Q96FT9 ABR-205ENST00000544583 5595 ntTSL 2 BASIC15.59■□□□□ 0.09
IFT43Q96FT9 ZBTB45P1-201ENST00000452761 1456 ntBASIC15.59■□□□□ 0.09
IFT43Q96FT9 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
IFT43Q96FT9 PIGS-203ENST00000395346 2815 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
IFT43Q96FT9 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.09
IFT43Q96FT9 UBR2-201ENST00000372899 7857 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.09
IFT43Q96FT9 UBR2-202ENST00000372901 7857 ntAPPRIS ALT1 TSL 5 BASIC15.58■□□□□ 0.09
IFT43Q96FT9 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC15.58■□□□□ 0.09
IFT43Q96FT9 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.09
IFT43Q96FT9 NUDT16-202ENST00000521288 6108 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
IFT43Q96FT9 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.09
IFT43Q96FT9 TACR2-201ENST00000373306 2083 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
IFT43Q96FT9 ITSN1-210ENST00000399353 3913 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 46.3 ms