Protein–RNA interactions for Protein: Q96FN4

CPNE2, Copine-2, humanhuman

Predicted RBP Predictions only

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE2Q96FN4 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CPNE2Q96FN4 OCRL-202ENST00000371113 5162 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CPNE2Q96FN4 FAM167A-201ENST00000284486 4094 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CPNE2Q96FN4 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CPNE2Q96FN4 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC13.2□□□□□ -0.3
CPNE2Q96FN4 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC13.2□□□□□ -0.3
CPNE2Q96FN4 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CPNE2Q96FN4 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
CPNE2Q96FN4 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
CPNE2Q96FN4 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC13.2□□□□□ -0.3
CPNE2Q96FN4 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
CPNE2Q96FN4 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
CPNE2Q96FN4 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC13.2□□□□□ -0.3
CPNE2Q96FN4 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC13.2□□□□□ -0.3
CPNE2Q96FN4 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC13.2□□□□□ -0.3
CPNE2Q96FN4 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC13.2□□□□□ -0.3
CPNE2Q96FN4 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC13.2□□□□□ -0.3
CPNE2Q96FN4 TIMM17BP1-201ENST00000545713 516 ntBASIC13.2□□□□□ -0.3
CPNE2Q96FN4 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
CPNE2Q96FN4 SNHG9-202ENST00000564014 471 ntBASIC13.2□□□□□ -0.3
CPNE2Q96FN4 AC010327.4-202ENST00000591484 748 ntBASIC13.2□□□□□ -0.3
CPNE2Q96FN4 COQ4-205ENST00000609948 956 ntTSL 2 BASIC13.2□□□□□ -0.3
CPNE2Q96FN4 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC13.2□□□□□ -0.3
CPNE2Q96FN4 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
CPNE2Q96FN4 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC13.2□□□□□ -0.3
CPNE2Q96FN4 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
CPNE2Q96FN4 PRSS30P-201ENST00000390681 2881 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
CPNE2Q96FN4 RIC8B-202ENST00000392837 5135 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
CPNE2Q96FN4 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC13.2□□□□□ -0.3
CPNE2Q96FN4 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC13.2□□□□□ -0.3
CPNE2Q96FN4 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CPNE2Q96FN4 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CPNE2Q96FN4 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
CPNE2Q96FN4 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC13.2□□□□□ -0.3
CPNE2Q96FN4 MTMR3-204ENST00000401950 6018 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
CPNE2Q96FN4 CRLS1-201ENST00000378863 3958 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CPNE2Q96FN4 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CPNE2Q96FN4 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
CPNE2Q96FN4 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
CPNE2Q96FN4 THBS2-201ENST00000366787 5811 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CPNE2Q96FN4 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CPNE2Q96FN4 FUT8-203ENST00000360689 5166 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CPNE2Q96FN4 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC13.19□□□□□ -0.3
CPNE2Q96FN4 CERKL-206ENST00000410087 3208 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
CPNE2Q96FN4 TMEM132C-201ENST00000435159 4947 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
CPNE2Q96FN4 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC13.19□□□□□ -0.3
CPNE2Q96FN4 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CPNE2Q96FN4 MAP3K11-208ENST00000530153 2830 ntTSL 2 BASIC13.19□□□□□ -0.3
CPNE2Q96FN4 GPAT3-201ENST00000264409 2625 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CPNE2Q96FN4 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC13.19□□□□□ -0.3
CPNE2Q96FN4 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CPNE2Q96FN4 XPR1-201ENST00000367589 4126 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
CPNE2Q96FN4 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC13.19□□□□□ -0.3
CPNE2Q96FN4 SPECC1-202ENST00000395522 2982 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
CPNE2Q96FN4 SLC20A2-208ENST00000520262 2992 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
CPNE2Q96FN4 KSR1-204ENST00000398988 7237 ntAPPRIS P2 TSL 5 BASIC13.19□□□□□ -0.3
CPNE2Q96FN4 PIK3R3-203ENST00000420542 5174 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CPNE2Q96FN4 TRIM46-202ENST00000368382 3127 ntTSL 2 BASIC13.19□□□□□ -0.3
CPNE2Q96FN4 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CPNE2Q96FN4 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CPNE2Q96FN4 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CPNE2Q96FN4 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
CPNE2Q96FN4 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC13.19□□□□□ -0.3
CPNE2Q96FN4 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
CPNE2Q96FN4 CNN2P11-201ENST00000429351 262 ntBASIC13.19□□□□□ -0.3
CPNE2Q96FN4 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC13.19□□□□□ -0.3
CPNE2Q96FN4 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC13.19□□□□□ -0.3
CPNE2Q96FN4 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC13.19□□□□□ -0.3
CPNE2Q96FN4 AC004066.1-201ENST00000502488 802 ntBASIC13.19□□□□□ -0.3
CPNE2Q96FN4 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC13.19□□□□□ -0.3
CPNE2Q96FN4 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
CPNE2Q96FN4 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC13.19□□□□□ -0.3
CPNE2Q96FN4 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
CPNE2Q96FN4 INO80C-210ENST00000590757 595 ntTSL 2 BASIC13.19□□□□□ -0.3
CPNE2Q96FN4 AC004461.2-201ENST00000629517 803 ntBASIC13.19□□□□□ -0.3
CPNE2Q96FN4 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC13.19□□□□□ -0.3
CPNE2Q96FN4 CXorf36-201ENST00000377934 2513 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
CPNE2Q96FN4 TRIM56-201ENST00000306085 10952 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
CPNE2Q96FN4 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
CPNE2Q96FN4 FAM219A-203ENST00000379080 3591 ntTSL 2 BASIC13.19□□□□□ -0.3
CPNE2Q96FN4 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
CPNE2Q96FN4 FAM9C-205ENST00000542843 5858 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
CPNE2Q96FN4 BAK1-201ENST00000360661 2132 ntTSL 5 BASIC13.19□□□□□ -0.3
CPNE2Q96FN4 AGBL3-202ENST00000435976 2495 ntTSL 5 BASIC13.19□□□□□ -0.3
CPNE2Q96FN4 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CPNE2Q96FN4 CEP68-202ENST00000377990 5847 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
CPNE2Q96FN4 EDEM3-201ENST00000318130 6898 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
CPNE2Q96FN4 ARHGAP27-203ENST00000428638 4242 ntAPPRIS P2 TSL 5 BASIC13.19□□□□□ -0.3
CPNE2Q96FN4 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
CPNE2Q96FN4 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
CPNE2Q96FN4 SDR42E2-201ENST00000602312 2630 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
CPNE2Q96FN4 ADAMTS10-201ENST00000270328 4194 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
CPNE2Q96FN4 KDM2B-205ENST00000536437 2762 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
CPNE2Q96FN4 PHTF1-204ENST00000369604 3273 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
CPNE2Q96FN4 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC13.19□□□□□ -0.3
CPNE2Q96FN4 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
CPNE2Q96FN4 RBM6-201ENST00000266022 3750 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CPNE2Q96FN4 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CPNE2Q96FN4 AMMECR1-203ENST00000372059 3052 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
CPNE2Q96FN4 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 83.7 ms