Protein–RNA interactions for Protein: Q8WV48

CCDC107, Coiled-coil domain-containing protein 107, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC107Q8WV48 MAP3K12-205ENST00000547488 2807 ntAPPRIS ALT2 TSL 2 BASIC13.13□□□□□ -0.31
CCDC107Q8WV48 AP001062.1-201ENST00000448927 4354 ntTSL 2 BASIC13.13□□□□□ -0.31
CCDC107Q8WV48 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC13.13□□□□□ -0.31
CCDC107Q8WV48 FP325330.2-201ENST00000624219 5630 ntBASIC13.13□□□□□ -0.31
CCDC107Q8WV48 SRGAP3-201ENST00000360413 8415 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
CCDC107Q8WV48 TBC1D22A-201ENST00000337137 3787 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CCDC107Q8WV48 TCAF1P1-201ENST00000414990 2232 ntBASIC13.13□□□□□ -0.31
CCDC107Q8WV48 EPB41L1-202ENST00000338074 6266 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
CCDC107Q8WV48 ABCG1-205ENST00000398449 2998 ntAPPRIS ALT1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CCDC107Q8WV48 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC13.13□□□□□ -0.31
CCDC107Q8WV48 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC13.13□□□□□ -0.31
CCDC107Q8WV48 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC13.13□□□□□ -0.31
CCDC107Q8WV48 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
CCDC107Q8WV48 GRN-214ENST00000589265 1632 ntTSL 5 BASIC13.13□□□□□ -0.31
CCDC107Q8WV48 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
CCDC107Q8WV48 MTRF1L-202ENST00000367231 3539 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
CCDC107Q8WV48 EIF5-202ENST00000392715 3417 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CCDC107Q8WV48 CICP17-201ENST00000418553 2377 ntBASIC13.13□□□□□ -0.31
CCDC107Q8WV48 ASAP1-201ENST00000357668 6344 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
CCDC107Q8WV48 AC011474.4-201ENST00000623523 2076 ntBASIC13.12□□□□□ -0.31
CCDC107Q8WV48 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
CCDC107Q8WV48 GCC1-201ENST00000321407 4149 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CCDC107Q8WV48 MBD1-201ENST00000269468 3259 ntAPPRIS P3 TSL 5 BASIC13.12□□□□□ -0.31
CCDC107Q8WV48 SYT1-204ENST00000457153 4592 ntAPPRIS ALT1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CCDC107Q8WV48 AGL-203ENST00000361915 7368 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CCDC107Q8WV48 SFXN3-202ENST00000393459 3098 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
CCDC107Q8WV48 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
CCDC107Q8WV48 RNF183-206ENST00000478815 2312 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
CCDC107Q8WV48 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
CCDC107Q8WV48 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
CCDC107Q8WV48 PRDM16-201ENST00000270722 8690 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
CCDC107Q8WV48 SH3BP5L-201ENST00000366472 3861 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CCDC107Q8WV48 AC087521.1-201ENST00000501541 2045 ntTSL 2 BASIC13.12□□□□□ -0.31
CCDC107Q8WV48 WDR77-201ENST00000235090 2576 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CCDC107Q8WV48 NFATC4-207ENST00000553469 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
CCDC107Q8WV48 UBA1-201ENST00000335972 3559 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CCDC107Q8WV48 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
CCDC107Q8WV48 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
CCDC107Q8WV48 SON-203ENST00000381679 7860 ntTSL 5 BASIC13.12□□□□□ -0.31
CCDC107Q8WV48 AC097359.2-201ENST00000604992 2389 ntBASIC13.12□□□□□ -0.31
CCDC107Q8WV48 APBB3-201ENST00000354402 1810 ntTSL 5 BASIC13.12□□□□□ -0.31
CCDC107Q8WV48 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
CCDC107Q8WV48 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
CCDC107Q8WV48 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC13.12□□□□□ -0.31
CCDC107Q8WV48 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CCDC107Q8WV48 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC13.12□□□□□ -0.31
CCDC107Q8WV48 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC13.12□□□□□ -0.31
CCDC107Q8WV48 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC13.12□□□□□ -0.31
CCDC107Q8WV48 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
CCDC107Q8WV48 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
CCDC107Q8WV48 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC13.12□□□□□ -0.31
CCDC107Q8WV48 AC023141.5-201ENST00000458585 616 ntBASIC13.12□□□□□ -0.31
CCDC107Q8WV48 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
CCDC107Q8WV48 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC13.12□□□□□ -0.31
CCDC107Q8WV48 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC13.12□□□□□ -0.31
CCDC107Q8WV48 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
CCDC107Q8WV48 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CCDC107Q8WV48 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
CCDC107Q8WV48 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC13.12□□□□□ -0.31
CCDC107Q8WV48 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CCDC107Q8WV48 HECTD1-203ENST00000553700 9080 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
CCDC107Q8WV48 MROH2A-208ENST00000610772 5324 ntAPPRIS P2 TSL 5 BASIC13.12□□□□□ -0.31
CCDC107Q8WV48 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC13.12□□□□□ -0.31
CCDC107Q8WV48 ATXN7L1-207ENST00000477775 2426 ntTSL 2 BASIC13.12□□□□□ -0.31
CCDC107Q8WV48 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
CCDC107Q8WV48 RAB18-208ENST00000611151 4931 ntTSL 5 BASIC13.12□□□□□ -0.31
CCDC107Q8WV48 HNRNPH3-201ENST00000265866 2339 ntAPPRIS P4 TSL 1 (best) BASIC13.12□□□□□ -0.31
CCDC107Q8WV48 SMTN-202ENST00000347557 3130 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
CCDC107Q8WV48 VCP-201ENST00000358901 4370 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CCDC107Q8WV48 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC13.12□□□□□ -0.31
CCDC107Q8WV48 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC13.12□□□□□ -0.31
CCDC107Q8WV48 RPS6KC1-206ENST00000543354 4082 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
CCDC107Q8WV48 INHBA-205ENST00000638023 2002 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
CCDC107Q8WV48 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CCDC107Q8WV48 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CCDC107Q8WV48 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC13.11□□□□□ -0.31
CCDC107Q8WV48 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
CCDC107Q8WV48 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
CCDC107Q8WV48 ADAM15-202ENST00000355956 2877 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
CCDC107Q8WV48 MYD88-203ENST00000417037 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
CCDC107Q8WV48 ZNF655-201ENST00000252713 2535 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
CCDC107Q8WV48 ALDH3A2-226ENST00000631291 3822 ntTSL 5 BASIC13.11□□□□□ -0.31
CCDC107Q8WV48 MYO16-203ENST00000357550 6779 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
CCDC107Q8WV48 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CCDC107Q8WV48 CHRFAM7A-201ENST00000299847 6220 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CCDC107Q8WV48 CEP135-202ENST00000422247 2092 ntTSL 2 BASIC13.11□□□□□ -0.31
CCDC107Q8WV48 RSPO3-201ENST00000356698 2697 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CCDC107Q8WV48 KCNH6-202ENST00000456941 2928 ntTSL 5 BASIC13.11□□□□□ -0.31
CCDC107Q8WV48 CEP131-202ENST00000374782 3505 ntAPPRIS P3 TSL 5 BASIC13.11□□□□□ -0.31
CCDC107Q8WV48 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC13.11□□□□□ -0.31
CCDC107Q8WV48 GFRA1-201ENST00000355422 2583 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
CCDC107Q8WV48 KLHL25-201ENST00000337975 3758 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CCDC107Q8WV48 PLA2G4F-202ENST00000397272 5587 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CCDC107Q8WV48 FBXL4-201ENST00000229971 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CCDC107Q8WV48 UBTF-205ENST00000526094 2459 ntTSL 5 BASIC13.11□□□□□ -0.31
CCDC107Q8WV48 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CCDC107Q8WV48 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC13.11□□□□□ -0.31
CCDC107Q8WV48 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC13.11□□□□□ -0.31
CCDC107Q8WV48 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
CCDC107Q8WV48 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC13.11□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms