Protein–RNA interactions for Protein: Q8NHS4

CLHC1, Clathrin heavy chain linker domain-containing protein 1, humanhuman

Predictions only

Length 586 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLHC1Q8NHS4 FOXD4L5-201ENST00000377420 3109 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
CLHC1Q8NHS4 FGFR1-201ENST00000326324 3816 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
CLHC1Q8NHS4 FBXO42-201ENST00000375592 6202 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CLHC1Q8NHS4 CDH23-201ENST00000224721 11139 ntAPPRIS P5 TSL 5 BASIC14.53□□□□□ -0.08
CLHC1Q8NHS4 CDH23-214ENST00000622827 11122 ntAPPRIS ALT1 TSL 5 BASIC14.53□□□□□ -0.08
CLHC1Q8NHS4 COL7A1-201ENST00000328333 9276 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CLHC1Q8NHS4 KIAA0319-203ENST00000535378 6896 ntAPPRIS ALT2 TSL 2 BASIC14.53□□□□□ -0.08
CLHC1Q8NHS4 ABCA7-203ENST00000435683 6211 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
CLHC1Q8NHS4 DMTN-201ENST00000265800 2554 ntTSL 5 BASIC14.53□□□□□ -0.08
CLHC1Q8NHS4 DMTN-207ENST00000517305 2551 ntTSL 5 BASIC14.53□□□□□ -0.08
CLHC1Q8NHS4 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CLHC1Q8NHS4 SSTR2-201ENST00000357585 7683 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CLHC1Q8NHS4 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CLHC1Q8NHS4 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CLHC1Q8NHS4 AL137783.1-201ENST00000623494 1896 ntBASIC14.53□□□□□ -0.08
CLHC1Q8NHS4 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
CLHC1Q8NHS4 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
CLHC1Q8NHS4 IRF4-201ENST00000380956 5331 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CLHC1Q8NHS4 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CLHC1Q8NHS4 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
CLHC1Q8NHS4 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CLHC1Q8NHS4 AC022144.1-201ENST00000602255 1580 ntBASIC14.53□□□□□ -0.08
CLHC1Q8NHS4 RTEL1-203ENST00000360203 4623 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
CLHC1Q8NHS4 ZFP90-209ENST00000570495 4636 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CLHC1Q8NHS4 BTBD7P1-201ENST00000447253 1453 ntBASIC14.53□□□□□ -0.08
CLHC1Q8NHS4 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC14.53□□□□□ -0.08
CLHC1Q8NHS4 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CLHC1Q8NHS4 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CLHC1Q8NHS4 CLEC12A-AS1-201ENST00000420905 3956 ntTSL 2 BASIC14.53□□□□□ -0.08
CLHC1Q8NHS4 WNT7B-201ENST00000339464 3919 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
CLHC1Q8NHS4 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CLHC1Q8NHS4 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CLHC1Q8NHS4 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
CLHC1Q8NHS4 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
CLHC1Q8NHS4 AC055876.3-201ENST00000431496 288 ntBASIC14.53□□□□□ -0.08
CLHC1Q8NHS4 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC14.53□□□□□ -0.08
CLHC1Q8NHS4 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC14.53□□□□□ -0.08
CLHC1Q8NHS4 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC14.53□□□□□ -0.08
CLHC1Q8NHS4 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC14.53□□□□□ -0.08
CLHC1Q8NHS4 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC14.53□□□□□ -0.08
CLHC1Q8NHS4 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CLHC1Q8NHS4 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC14.53□□□□□ -0.08
CLHC1Q8NHS4 PRR29-204ENST00000577953 565 ntTSL 4 BASIC14.53□□□□□ -0.08
CLHC1Q8NHS4 AC107373.2-201ENST00000607735 490 ntBASIC14.53□□□□□ -0.08
CLHC1Q8NHS4 AC138649.4-201ENST00000612222 287 ntBASIC14.53□□□□□ -0.08
CLHC1Q8NHS4 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC14.53□□□□□ -0.08
CLHC1Q8NHS4 TRIM65-201ENST00000269383 3439 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CLHC1Q8NHS4 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CLHC1Q8NHS4 VPS36-207ENST00000611132 4607 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CLHC1Q8NHS4 ZSCAN32-215ENST00000618425 2788 ntTSL 2 BASIC14.53□□□□□ -0.08
CLHC1Q8NHS4 PLAU-202ENST00000446342 2658 ntAPPRIS ALT2 TSL 2 BASIC14.53□□□□□ -0.08
CLHC1Q8NHS4 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
CLHC1Q8NHS4 RAPGEF1-202ENST00000372190 6045 ntAPPRIS P4 TSL 1 (best) BASIC14.53□□□□□ -0.08
CLHC1Q8NHS4 CLK4-201ENST00000316308 2568 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CLHC1Q8NHS4 CCNF-202ENST00000397066 4283 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CLHC1Q8NHS4 SORCS1-201ENST00000263054 7272 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CLHC1Q8NHS4 HNRNPLL-205ENST00000409636 3980 ntTSL 2 BASIC14.53□□□□□ -0.08
CLHC1Q8NHS4 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CLHC1Q8NHS4 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
CLHC1Q8NHS4 FAM219B-201ENST00000357635 3550 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CLHC1Q8NHS4 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
CLHC1Q8NHS4 KIAA0319-201ENST00000378214 6802 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
CLHC1Q8NHS4 COL9A2-202ENST00000372748 2862 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
CLHC1Q8NHS4 MROH1-209ENST00000534366 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
CLHC1Q8NHS4 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC14.52□□□□□ -0.08
CLHC1Q8NHS4 PRKY-203ENST00000528056 7218 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
CLHC1Q8NHS4 PLA2G4B-202ENST00000458483 2734 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.08
CLHC1Q8NHS4 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
CLHC1Q8NHS4 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
CLHC1Q8NHS4 AL158070.2-201ENST00000623713 1621 ntBASIC14.52□□□□□ -0.08
CLHC1Q8NHS4 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC14.52□□□□□ -0.08
CLHC1Q8NHS4 CERS6-202ENST00000392687 6851 ntAPPRIS ALT1 TSL 1 (best) BASIC14.52□□□□□ -0.08
CLHC1Q8NHS4 OSBPL3-201ENST00000313367 6760 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
CLHC1Q8NHS4 NDUFC2-201ENST00000281031 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
CLHC1Q8NHS4 PAPOLA-201ENST00000216277 4519 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
CLHC1Q8NHS4 EGFR-206ENST00000454757 5464 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
CLHC1Q8NHS4 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
CLHC1Q8NHS4 AC027601.5-201ENST00000624065 2482 ntBASIC14.52□□□□□ -0.08
CLHC1Q8NHS4 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
CLHC1Q8NHS4 PRDM4-201ENST00000228437 4210 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.08
CLHC1Q8NHS4 TMPRSS2-202ENST00000398585 3240 ntTSL 2 BASIC14.52□□□□□ -0.08
CLHC1Q8NHS4 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC14.52□□□□□ -0.08
CLHC1Q8NHS4 AP000550.1-201ENST00000420508 4833 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
CLHC1Q8NHS4 DDX17-202ENST00000396821 4791 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
CLHC1Q8NHS4 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
CLHC1Q8NHS4 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC14.52□□□□□ -0.09
CLHC1Q8NHS4 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC14.52□□□□□ -0.09
CLHC1Q8NHS4 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC14.52□□□□□ -0.09
CLHC1Q8NHS4 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC14.52□□□□□ -0.09
CLHC1Q8NHS4 PON3-203ENST00000427422 894 ntTSL 3 BASIC14.52□□□□□ -0.09
CLHC1Q8NHS4 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC14.52□□□□□ -0.09
CLHC1Q8NHS4 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC14.52□□□□□ -0.09
CLHC1Q8NHS4 FAM86LP-201ENST00000478302 853 ntBASIC14.52□□□□□ -0.09
CLHC1Q8NHS4 AC004890.2-204ENST00000481968 304 ntBASIC14.52□□□□□ -0.09
CLHC1Q8NHS4 GAPDHP40-201ENST00000505218 1006 ntBASIC14.52□□□□□ -0.09
CLHC1Q8NHS4 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC14.52□□□□□ -0.09
CLHC1Q8NHS4 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CLHC1Q8NHS4 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC14.52□□□□□ -0.09
CLHC1Q8NHS4 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC14.52□□□□□ -0.09
CLHC1Q8NHS4 AC036164.1-201ENST00000570544 333 ntBASIC14.52□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 114.2 ms