Protein–RNA interactions for Protein: Q8NBW4

SLC38A9, Sodium-coupled neutral amino acid transporter 9, humanhuman

Predictions only

Length 561 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC38A9Q8NBW4 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
SLC38A9Q8NBW4 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
SLC38A9Q8NBW4 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
SLC38A9Q8NBW4 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SLC38A9Q8NBW4 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC14.13□□□□□ -0.15
SLC38A9Q8NBW4 AC003102.2-201ENST00000589195 1469 ntBASIC14.13□□□□□ -0.15
SLC38A9Q8NBW4 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SLC38A9Q8NBW4 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SLC38A9Q8NBW4 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
SLC38A9Q8NBW4 AC010547.4-201ENST00000561754 1378 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
SLC38A9Q8NBW4 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SLC38A9Q8NBW4 RDH5-201ENST00000257895 1269 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SLC38A9Q8NBW4 GSTT2B-201ENST00000290765 1099 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SLC38A9Q8NBW4 C1orf159-201ENST00000379319 1097 ntAPPRIS P3 TSL 5 BASIC14.13□□□□□ -0.15
SLC38A9Q8NBW4 SUMO1-204ENST00000409181 784 ntTSL 3 BASIC14.13□□□□□ -0.15
SLC38A9Q8NBW4 SUMO1-207ENST00000409498 779 ntTSL 3 BASIC14.13□□□□□ -0.15
SLC38A9Q8NBW4 IP6K2-205ENST00000413298 792 ntTSL 3 BASIC14.13□□□□□ -0.15
SLC38A9Q8NBW4 SLC25A24P2-201ENST00000415059 510 ntBASIC14.13□□□□□ -0.15
SLC38A9Q8NBW4 ANO1-AS1-201ENST00000524987 646 ntTSL 3 BASIC14.13□□□□□ -0.15
SLC38A9Q8NBW4 ORAOV1-211ENST00000542341 775 ntTSL 2 BASIC14.13□□□□□ -0.15
SLC38A9Q8NBW4 RDH5-204ENST00000548082 1259 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SLC38A9Q8NBW4 ZNF385A-213ENST00000551771 1111 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
SLC38A9Q8NBW4 AC138123.2-203ENST00000552451 653 ntTSL 3 BASIC14.13□□□□□ -0.15
SLC38A9Q8NBW4 C15orf40-211ENST00000565712 559 ntTSL 3 BASIC14.13□□□□□ -0.15
SLC38A9Q8NBW4 AC093525.1-201ENST00000569317 596 ntAPPRIS P1 TSL 3 BASIC14.13□□□□□ -0.15
SLC38A9Q8NBW4 AC009955.4-201ENST00000597192 544 ntBASIC14.13□□□□□ -0.15
SLC38A9Q8NBW4 AC084346.2-201ENST00000607097 949 ntBASIC14.13□□□□□ -0.15
SLC38A9Q8NBW4 AC068790.8-201ENST00000618862 504 ntAPPRIS P1 TSL 3 BASIC14.13□□□□□ -0.15
SLC38A9Q8NBW4 AL137026.1-201ENST00000624407 503 ntTSL 4 BASIC14.13□□□□□ -0.15
SLC38A9Q8NBW4 LINC00854-216ENST00000636331 718 ntAPPRIS P5 TSL 5 BASIC14.13□□□□□ -0.15
SLC38A9Q8NBW4 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
SLC38A9Q8NBW4 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
SLC38A9Q8NBW4 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC14.13□□□□□ -0.15
SLC38A9Q8NBW4 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
SLC38A9Q8NBW4 ACSF2-202ENST00000427954 2251 ntTSL 2 BASIC14.13□□□□□ -0.15
SLC38A9Q8NBW4 AC138035.3-201ENST00000622706 2791 ntBASIC14.13□□□□□ -0.15
SLC38A9Q8NBW4 MYB-242ENST00000618728 3545 ntTSL 5 BASIC14.13□□□□□ -0.15
SLC38A9Q8NBW4 PTOV1-214ENST00000600603 1443 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
SLC38A9Q8NBW4 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
SLC38A9Q8NBW4 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SLC38A9Q8NBW4 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
SLC38A9Q8NBW4 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC14.13□□□□□ -0.15
SLC38A9Q8NBW4 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
SLC38A9Q8NBW4 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SLC38A9Q8NBW4 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
SLC38A9Q8NBW4 SHC1P1-201ENST00000425230 1745 ntBASIC14.12□□□□□ -0.15
SLC38A9Q8NBW4 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
SLC38A9Q8NBW4 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
SLC38A9Q8NBW4 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
SLC38A9Q8NBW4 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC14.12□□□□□ -0.15
SLC38A9Q8NBW4 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC14.12□□□□□ -0.15
SLC38A9Q8NBW4 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC14.12□□□□□ -0.15
SLC38A9Q8NBW4 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SLC38A9Q8NBW4 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC14.12□□□□□ -0.15
SLC38A9Q8NBW4 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC14.12□□□□□ -0.15
SLC38A9Q8NBW4 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SLC38A9Q8NBW4 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SLC38A9Q8NBW4 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SLC38A9Q8NBW4 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC14.12□□□□□ -0.15
SLC38A9Q8NBW4 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
SLC38A9Q8NBW4 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
SLC38A9Q8NBW4 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SLC38A9Q8NBW4 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
SLC38A9Q8NBW4 MBD3L5-201ENST00000329753 778 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SLC38A9Q8NBW4 DPM3-202ENST00000368399 517 ntBASIC14.12□□□□□ -0.15
SLC38A9Q8NBW4 FGF14-202ENST00000376143 744 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SLC38A9Q8NBW4 CD8B-204ENST00000393759 1096 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
SLC38A9Q8NBW4 AC010141.1-201ENST00000411585 623 ntBASIC14.12□□□□□ -0.15
SLC38A9Q8NBW4 AP000320.1-201ENST00000440403 471 ntTSL 3 BASIC14.12□□□□□ -0.15
SLC38A9Q8NBW4 RCAN1-212ENST00000492600 935 ntTSL 2 BASIC14.12□□□□□ -0.15
SLC38A9Q8NBW4 NME2-204ENST00000503064 749 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SLC38A9Q8NBW4 CDC23-208ENST00000505120 455 ntTSL 3 BASIC14.12□□□□□ -0.15
SLC38A9Q8NBW4 CYB561A3-219ENST00000544118 1136 ntTSL 5 BASIC14.12□□□□□ -0.15
SLC38A9Q8NBW4 CD63-214ENST00000552692 949 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SLC38A9Q8NBW4 LINC02332-201ENST00000557232 386 ntTSL 3 BASIC14.12□□□□□ -0.15
SLC38A9Q8NBW4 BNIP3P13-201ENST00000599968 566 ntBASIC14.12□□□□□ -0.15
SLC38A9Q8NBW4 MEF2C-227ENST00000626391 1182 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
SLC38A9Q8NBW4 MEF2C-231ENST00000628656 1254 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
SLC38A9Q8NBW4 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
SLC38A9Q8NBW4 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SLC38A9Q8NBW4 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SLC38A9Q8NBW4 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
SLC38A9Q8NBW4 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SLC38A9Q8NBW4 AL596257.1-201ENST00000641463 2694 ntBASIC14.12□□□□□ -0.15
SLC38A9Q8NBW4 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC14.12□□□□□ -0.15
SLC38A9Q8NBW4 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SLC38A9Q8NBW4 MAGEA4-205ENST00000393920 1721 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
SLC38A9Q8NBW4 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SLC38A9Q8NBW4 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC14.12□□□□□ -0.15
SLC38A9Q8NBW4 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
SLC38A9Q8NBW4 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SLC38A9Q8NBW4 AC091951.1-201ENST00000512854 2465 ntBASIC14.12□□□□□ -0.15
SLC38A9Q8NBW4 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SLC38A9Q8NBW4 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
SLC38A9Q8NBW4 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
SLC38A9Q8NBW4 ZEB1-AS1-208ENST00000607166 2503 ntBASIC14.11□□□□□ -0.15
SLC38A9Q8NBW4 OSCP1-204ENST00000433045 1381 ntTSL 5 BASIC14.11□□□□□ -0.15
SLC38A9Q8NBW4 WASH3P-207ENST00000560956 1394 ntBASIC14.11□□□□□ -0.15
SLC38A9Q8NBW4 RBFOX2-201ENST00000262829 1538 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
SLC38A9Q8NBW4 NFIX-208ENST00000587260 1537 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 43.3 ms