Protein–RNA interactions for Protein: Q86UE6

LRRTM1, Leucine-rich repeat transmembrane neuronal protein 1, humanhuman

Predictions only

Length 522 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM1Q86UE6 SLC4A7-213ENST00000454389 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
LRRTM1Q86UE6 ZNF664-202ENST00000392404 4262 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
LRRTM1Q86UE6 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC13.13□□□□□ -0.31
LRRTM1Q86UE6 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
LRRTM1Q86UE6 ILDR1-205ENST00000462014 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
LRRTM1Q86UE6 OPN5-202ENST00000371211 1801 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
LRRTM1Q86UE6 DNAAF5-202ENST00000403952 1907 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
LRRTM1Q86UE6 ZNF239-203ENST00000426961 2027 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
LRRTM1Q86UE6 ADCY7-208ENST00000566433 2535 ntTSL 5 BASIC13.13□□□□□ -0.31
LRRTM1Q86UE6 PXDNL-201ENST00000356297 4805 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
LRRTM1Q86UE6 ZBTB7C-213ENST00000588982 4949 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
LRRTM1Q86UE6 PTPRU-205ENST00000460170 5337 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
LRRTM1Q86UE6 FBXO3-203ENST00000526785 5798 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
LRRTM1Q86UE6 KIAA0895L-201ENST00000290881 3550 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
LRRTM1Q86UE6 PELP1-212ENST00000574876 3465 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
LRRTM1Q86UE6 ELN-203ENST00000320492 2991 ntAPPRIS ALT2 TSL 2 BASIC13.13□□□□□ -0.31
LRRTM1Q86UE6 HDAC11-213ENST00000437379 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
LRRTM1Q86UE6 COL6A4P2-202ENST00000504443 2753 ntBASIC13.13□□□□□ -0.31
LRRTM1Q86UE6 PSEN2-201ENST00000366782 2465 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
LRRTM1Q86UE6 AC007603.1-201ENST00000563124 2085 ntTSL 2 BASIC13.13□□□□□ -0.31
LRRTM1Q86UE6 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC13.13□□□□□ -0.31
LRRTM1Q86UE6 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
LRRTM1Q86UE6 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
LRRTM1Q86UE6 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
LRRTM1Q86UE6 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
LRRTM1Q86UE6 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC13.13□□□□□ -0.31
LRRTM1Q86UE6 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
LRRTM1Q86UE6 MIR940-201ENST00000401276 94 ntBASIC13.13□□□□□ -0.31
LRRTM1Q86UE6 RPL37AP1-201ENST00000412502 279 ntBASIC13.13□□□□□ -0.31
LRRTM1Q86UE6 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC13.13□□□□□ -0.31
LRRTM1Q86UE6 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC13.13□□□□□ -0.31
LRRTM1Q86UE6 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
LRRTM1Q86UE6 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC13.13□□□□□ -0.31
LRRTM1Q86UE6 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC13.13□□□□□ -0.31
LRRTM1Q86UE6 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
LRRTM1Q86UE6 AC004066.1-201ENST00000502488 802 ntBASIC13.13□□□□□ -0.31
LRRTM1Q86UE6 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC13.13□□□□□ -0.31
LRRTM1Q86UE6 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC13.13□□□□□ -0.31
LRRTM1Q86UE6 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC13.13□□□□□ -0.31
LRRTM1Q86UE6 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
LRRTM1Q86UE6 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC13.13□□□□□ -0.31
LRRTM1Q86UE6 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC13.13□□□□□ -0.31
LRRTM1Q86UE6 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC13.13□□□□□ -0.31
LRRTM1Q86UE6 MTDHP5-201ENST00000598980 586 ntBASIC13.13□□□□□ -0.31
LRRTM1Q86UE6 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC13.13□□□□□ -0.31
LRRTM1Q86UE6 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC13.13□□□□□ -0.31
LRRTM1Q86UE6 NFKB2-204ENST00000428099 3416 ntAPPRIS ALT1 TSL 1 (best) BASIC13.13□□□□□ -0.31
LRRTM1Q86UE6 TET2-207ENST00000513237 10166 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
LRRTM1Q86UE6 TET2-209ENST00000540549 10166 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
LRRTM1Q86UE6 NPRL3-212ENST00000620134 3203 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
LRRTM1Q86UE6 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
LRRTM1Q86UE6 FAM90A1-203ENST00000538603 2513 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
LRRTM1Q86UE6 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
LRRTM1Q86UE6 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
LRRTM1Q86UE6 EXO5-201ENST00000296380 2217 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
LRRTM1Q86UE6 SPOCK3-226ENST00000541354 2797 ntTSL 2 BASIC13.13□□□□□ -0.31
LRRTM1Q86UE6 OTOF-202ENST00000338581 4954 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
LRRTM1Q86UE6 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC13.13□□□□□ -0.31
LRRTM1Q86UE6 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC13.13□□□□□ -0.31
LRRTM1Q86UE6 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
LRRTM1Q86UE6 SMG9-211ENST00000601170 2387 ntTSL 2 BASIC13.13□□□□□ -0.31
LRRTM1Q86UE6 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
LRRTM1Q86UE6 ADAMTS14-201ENST00000373207 5260 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
LRRTM1Q86UE6 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
LRRTM1Q86UE6 PCNX4-203ENST00000406854 4666 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
LRRTM1Q86UE6 ATP2B3-204ENST00000370186 6742 ntTSL 5 BASIC13.12□□□□□ -0.31
LRRTM1Q86UE6 MEF2D-201ENST00000348159 5965 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
LRRTM1Q86UE6 RTF1-201ENST00000389629 5021 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
LRRTM1Q86UE6 TMEM184B-202ENST00000361906 3611 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
LRRTM1Q86UE6 RAPGEF1-202ENST00000372190 6045 ntAPPRIS P4 TSL 1 (best) BASIC13.12□□□□□ -0.31
LRRTM1Q86UE6 ALDH3B1-201ENST00000342456 2786 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
LRRTM1Q86UE6 OR2V1-202ENST00000641318 2665 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
LRRTM1Q86UE6 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
LRRTM1Q86UE6 LDHA-203ENST00000379412 1922 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
LRRTM1Q86UE6 GOLGA6L17P-202ENST00000614358 1398 ntBASIC13.12□□□□□ -0.31
LRRTM1Q86UE6 KCNH6-202ENST00000456941 2928 ntTSL 5 BASIC13.12□□□□□ -0.31
LRRTM1Q86UE6 ZKSCAN4-201ENST00000377294 2375 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
LRRTM1Q86UE6 AC090505.1-201ENST00000430515 1834 ntBASIC13.12□□□□□ -0.31
LRRTM1Q86UE6 NEAT1-201ENST00000499732 1811 ntTSL 2 BASIC13.12□□□□□ -0.31
LRRTM1Q86UE6 CARHSP1-220ENST00000619881 2849 ntAPPRIS P1 TSL 3 BASIC13.12□□□□□ -0.31
LRRTM1Q86UE6 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
LRRTM1Q86UE6 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
LRRTM1Q86UE6 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
LRRTM1Q86UE6 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC13.12□□□□□ -0.31
LRRTM1Q86UE6 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC13.12□□□□□ -0.31
LRRTM1Q86UE6 SATB1-217ENST00000493952 626 ntTSL 3 BASIC13.12□□□□□ -0.31
LRRTM1Q86UE6 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC13.12□□□□□ -0.31
LRRTM1Q86UE6 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC13.12□□□□□ -0.31
LRRTM1Q86UE6 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
LRRTM1Q86UE6 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC13.12□□□□□ -0.31
LRRTM1Q86UE6 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC13.12□□□□□ -0.31
LRRTM1Q86UE6 KLK8-205ENST00000593490 267 ntTSL 3 BASIC13.12□□□□□ -0.31
LRRTM1Q86UE6 MIR6080-201ENST00000617359 66 ntBASIC13.12□□□□□ -0.31
LRRTM1Q86UE6 ALDH3A2-226ENST00000631291 3822 ntTSL 5 BASIC13.12□□□□□ -0.31
LRRTM1Q86UE6 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC13.12□□□□□ -0.31
LRRTM1Q86UE6 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
LRRTM1Q86UE6 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
LRRTM1Q86UE6 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
LRRTM1Q86UE6 CDK20-202ENST00000336654 2176 ntTSL 2 BASIC13.12□□□□□ -0.31
LRRTM1Q86UE6 TNIK-204ENST00000436636 6970 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 62.8 ms