Protein–RNA interactions for Protein: Q29RF7

PDS5A, Sister chromatid cohesion protein PDS5 homolog A, humanhuman

Known RBP Predictions only

Length 1,337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDS5AQ29RF7 KRTAP19-5-201ENST00000334151 461 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
PDS5AQ29RF7 AL138767.1-201ENST00000354527 744 ntTSL 3 BASIC17.84■□□□□ 0.45
PDS5AQ29RF7 RN7SKP214-201ENST00000364208 315 ntBASIC17.84■□□□□ 0.45
PDS5AQ29RF7 CSNK2B-201ENST00000375865 908 ntAPPRIS P1 TSL 3 BASIC17.84■□□□□ 0.45
PDS5AQ29RF7 SERPINE3-201ENST00000400389 1218 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PDS5AQ29RF7 BANF1-202ENST00000445560 946 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PDS5AQ29RF7 LAMA4-209ENST00000453937 645 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
PDS5AQ29RF7 RCAN1-212ENST00000492600 935 ntTSL 2 BASIC17.84■□□□□ 0.45
PDS5AQ29RF7 RCC2P8-201ENST00000502779 1035 ntBASIC17.84■□□□□ 0.45
PDS5AQ29RF7 LINC01848-201ENST00000523446 518 ntTSL 3 BASIC17.84■□□□□ 0.45
PDS5AQ29RF7 CCNC-217ENST00000523985 958 ntTSL 2 BASIC17.84■□□□□ 0.45
PDS5AQ29RF7 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
PDS5AQ29RF7 ERH-203ENST00000557016 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PDS5AQ29RF7 GFER-204ENST00000567719 483 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
PDS5AQ29RF7 TBC1D16-205ENST00000572862 1141 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
PDS5AQ29RF7 AC133540.1-201ENST00000620845 1019 ntBASIC17.84■□□□□ 0.45
PDS5AQ29RF7 AC079325.2-202ENST00000641031 462 ntAPPRIS ALT2 BASIC17.84■□□□□ 0.45
PDS5AQ29RF7 RGS6-217ENST00000555571 1764 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
PDS5AQ29RF7 AC011270.2-201ENST00000624293 2550 ntBASIC17.84■□□□□ 0.45
PDS5AQ29RF7 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
PDS5AQ29RF7 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PDS5AQ29RF7 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC17.84■□□□□ 0.45
PDS5AQ29RF7 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PDS5AQ29RF7 AC139712.1-201ENST00000378256 1875 ntBASIC17.84■□□□□ 0.45
PDS5AQ29RF7 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
PDS5AQ29RF7 AC008132.1-202ENST00000342005 1389 ntBASIC17.84■□□□□ 0.45
PDS5AQ29RF7 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PDS5AQ29RF7 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
PDS5AQ29RF7 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC17.84■□□□□ 0.45
PDS5AQ29RF7 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
PDS5AQ29RF7 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
PDS5AQ29RF7 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC17.83■□□□□ 0.45
PDS5AQ29RF7 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
PDS5AQ29RF7 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
PDS5AQ29RF7 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
PDS5AQ29RF7 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC17.83■□□□□ 0.45
PDS5AQ29RF7 ZEB1-AS1-208ENST00000607166 2503 ntBASIC17.83■□□□□ 0.45
PDS5AQ29RF7 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
PDS5AQ29RF7 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC17.83■□□□□ 0.45
PDS5AQ29RF7 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
PDS5AQ29RF7 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
PDS5AQ29RF7 UBXN11-202ENST00000357089 1555 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
PDS5AQ29RF7 KCNAB2-207ENST00000378111 822 ntTSL 3 BASIC17.83■□□□□ 0.44
PDS5AQ29RF7 IGHV3-13-201ENST00000390602 430 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
PDS5AQ29RF7 ATP6V1E1-202ENST00000399796 1208 ntTSL 2 BASIC17.83■□□□□ 0.44
PDS5AQ29RF7 ACTG1P2-201ENST00000415776 1125 ntBASIC17.83■□□□□ 0.44
PDS5AQ29RF7 ZSCAN32-204ENST00000422427 1267 ntTSL 2 BASIC17.83■□□□□ 0.44
PDS5AQ29RF7 ACTG1P11-201ENST00000425411 1125 ntBASIC17.83■□□□□ 0.44
PDS5AQ29RF7 LINC01352-201ENST00000431347 962 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
PDS5AQ29RF7 AL157373.2-201ENST00000437559 784 ntTSL 3 BASIC17.83■□□□□ 0.44
PDS5AQ29RF7 FOXP4-AS1-203ENST00000439386 404 ntTSL 3 BASIC17.83■□□□□ 0.44
PDS5AQ29RF7 SHANK2-210ENST00000449116 939 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
PDS5AQ29RF7 PCOLCE2-208ENST00000485766 1088 ntTSL 5 BASIC17.83■□□□□ 0.44
PDS5AQ29RF7 YIF1A-210ENST00000496746 667 ntTSL 2 BASIC17.83■□□□□ 0.44
PDS5AQ29RF7 PRSS30P-205ENST00000506153 699 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
PDS5AQ29RF7 MSC-AS1-204ENST00000518916 864 ntTSL 3 BASIC17.83■□□□□ 0.44
PDS5AQ29RF7 RHOQP1-201ENST00000555758 579 ntBASIC17.83■□□□□ 0.44
PDS5AQ29RF7 CMTM3-215ENST00000568477 687 ntTSL 3 BASIC17.83■□□□□ 0.44
PDS5AQ29RF7 ARL16-210ENST00000574938 751 ntTSL 2 BASIC17.83■□□□□ 0.44
PDS5AQ29RF7 AC127024.2-201ENST00000581019 789 ntTSL 5 BASIC17.83■□□□□ 0.44
PDS5AQ29RF7 CYP4F23P-201ENST00000593402 1579 ntBASIC17.83■□□□□ 0.44
PDS5AQ29RF7 L34079.1-201ENST00000594374 393 ntAPPRIS P1 TSL 3 BASIC17.83■□□□□ 0.44
PDS5AQ29RF7 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC17.83■□□□□ 0.44
PDS5AQ29RF7 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
PDS5AQ29RF7 C12orf76-209ENST00000615315 1580 ntTSL 5 BASIC17.83■□□□□ 0.44
PDS5AQ29RF7 LINC01668-201ENST00000635001 513 ntTSL 4 BASIC17.83■□□□□ 0.44
PDS5AQ29RF7 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
PDS5AQ29RF7 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
PDS5AQ29RF7 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC17.83■□□□□ 0.44
PDS5AQ29RF7 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
PDS5AQ29RF7 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
PDS5AQ29RF7 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
PDS5AQ29RF7 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
PDS5AQ29RF7 TMBIM1-201ENST00000258412 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
PDS5AQ29RF7 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
PDS5AQ29RF7 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
PDS5AQ29RF7 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
PDS5AQ29RF7 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC17.83■□□□□ 0.44
PDS5AQ29RF7 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PDS5AQ29RF7 LINC02076-201ENST00000577684 1871 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
PDS5AQ29RF7 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC17.82■□□□□ 0.44
PDS5AQ29RF7 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
PDS5AQ29RF7 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PDS5AQ29RF7 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
PDS5AQ29RF7 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC17.82■□□□□ 0.44
PDS5AQ29RF7 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
PDS5AQ29RF7 GSTT2B-201ENST00000290765 1099 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PDS5AQ29RF7 NRM-202ENST00000376420 1228 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
PDS5AQ29RF7 RPL13A-201ENST00000391857 1181 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PDS5AQ29RF7 HNRNPA1P27-201ENST00000412087 955 ntBASIC17.82■□□□□ 0.44
PDS5AQ29RF7 DNAJC27-AS1-207ENST00000451291 488 ntTSL 3 BASIC17.82■□□□□ 0.44
PDS5AQ29RF7 AC011773.1-201ENST00000520129 468 ntTSL 5 BASIC17.82■□□□□ 0.44
PDS5AQ29RF7 AL355310.3-201ENST00000526411 582 ntTSL 3 BASIC17.82■□□□□ 0.44
PDS5AQ29RF7 ANO1-AS2-202ENST00000533327 498 ntTSL 3 BASIC17.82■□□□□ 0.44
PDS5AQ29RF7 AC117500.3-201ENST00000537032 666 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
PDS5AQ29RF7 SEC23A-204ENST00000548032 907 ntTSL 2 BASIC17.82■□□□□ 0.44
PDS5AQ29RF7 AC105129.2-201ENST00000559536 390 ntBASIC17.82■□□□□ 0.44
PDS5AQ29RF7 JMJD8-203ENST00000562824 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
PDS5AQ29RF7 NFIC-204ENST00000586919 1221 ntTSL 5 BASIC17.82■□□□□ 0.44
PDS5AQ29RF7 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC17.82■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms