Protein–RNA interactions for Protein: Q09470

KCNA1, Potassium voltage-gated channel subfamily A member 1, humanhuman

Predictions only

Length 495 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNA1Q09470 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
KCNA1Q09470 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
KCNA1Q09470 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
KCNA1Q09470 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
KCNA1Q09470 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
KCNA1Q09470 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
KCNA1Q09470 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
KCNA1Q09470 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
KCNA1Q09470 AC020910.5-201ENST00000623668 1865 ntBASIC16.53■□□□□ 0.24
KCNA1Q09470 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC16.53■□□□□ 0.24
KCNA1Q09470 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
KCNA1Q09470 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
KCNA1Q09470 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC16.53■□□□□ 0.24
KCNA1Q09470 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC16.53■□□□□ 0.24
KCNA1Q09470 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC16.53■□□□□ 0.24
KCNA1Q09470 FAM197Y7-201ENST00000432892 766 ntBASIC16.53■□□□□ 0.24
KCNA1Q09470 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC16.53■□□□□ 0.24
KCNA1Q09470 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC16.53■□□□□ 0.24
KCNA1Q09470 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
KCNA1Q09470 VASH1-AS1-201ENST00000554058 871 ntTSL 3 BASIC16.53■□□□□ 0.24
KCNA1Q09470 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC16.53■□□□□ 0.24
KCNA1Q09470 ORC6-206ENST00000568364 888 ntTSL 5 BASIC16.53■□□□□ 0.24
KCNA1Q09470 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC16.53■□□□□ 0.24
KCNA1Q09470 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC16.53■□□□□ 0.24
KCNA1Q09470 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC16.53■□□□□ 0.24
KCNA1Q09470 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
KCNA1Q09470 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
KCNA1Q09470 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC16.53■□□□□ 0.24
KCNA1Q09470 ENPP7P14-201ENST00000621765 1040 ntBASIC16.53■□□□□ 0.24
KCNA1Q09470 AL603764.1-201ENST00000636452 321 ntBASIC16.53■□□□□ 0.24
KCNA1Q09470 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC16.53■□□□□ 0.24
KCNA1Q09470 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC16.53■□□□□ 0.24
KCNA1Q09470 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
KCNA1Q09470 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
KCNA1Q09470 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC16.53■□□□□ 0.24
KCNA1Q09470 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
KCNA1Q09470 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC16.53■□□□□ 0.24
KCNA1Q09470 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC16.53■□□□□ 0.24
KCNA1Q09470 MX1-218ENST00000619682 1980 ntTSL 5 BASIC16.53■□□□□ 0.24
KCNA1Q09470 TOX3-201ENST00000219746 3233 ntAPPRIS P4 TSL 2 BASIC16.53■□□□□ 0.24
KCNA1Q09470 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC16.53■□□□□ 0.24
KCNA1Q09470 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
KCNA1Q09470 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
KCNA1Q09470 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
KCNA1Q09470 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
KCNA1Q09470 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
KCNA1Q09470 AC063926.2-201ENST00000623766 1308 ntBASIC16.52■□□□□ 0.24
KCNA1Q09470 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
KCNA1Q09470 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
KCNA1Q09470 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
KCNA1Q09470 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
KCNA1Q09470 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
KCNA1Q09470 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC16.52■□□□□ 0.24
KCNA1Q09470 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
KCNA1Q09470 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC16.52■□□□□ 0.24
KCNA1Q09470 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
KCNA1Q09470 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC16.52■□□□□ 0.24
KCNA1Q09470 AC245100.3-201ENST00000441281 285 ntBASIC16.52■□□□□ 0.24
KCNA1Q09470 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC16.52■□□□□ 0.24
KCNA1Q09470 AC007551.1-201ENST00000457394 519 ntBASIC16.52■□□□□ 0.24
KCNA1Q09470 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC16.52■□□□□ 0.24
KCNA1Q09470 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
KCNA1Q09470 IL32-218ENST00000530890 774 ntAPPRIS ALT2 TSL 2 BASIC16.52■□□□□ 0.24
KCNA1Q09470 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
KCNA1Q09470 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC16.52■□□□□ 0.24
KCNA1Q09470 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC16.52■□□□□ 0.24
KCNA1Q09470 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
KCNA1Q09470 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC16.52■□□□□ 0.24
KCNA1Q09470 AC068587.6-202ENST00000641839 5619 ntBASIC16.52■□□□□ 0.24
KCNA1Q09470 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
KCNA1Q09470 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
KCNA1Q09470 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
KCNA1Q09470 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC16.52■□□□□ 0.23
KCNA1Q09470 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC16.52■□□□□ 0.23
KCNA1Q09470 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC16.52■□□□□ 0.23
KCNA1Q09470 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC16.52■□□□□ 0.23
KCNA1Q09470 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC16.52■□□□□ 0.23
KCNA1Q09470 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
KCNA1Q09470 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC16.51■□□□□ 0.23
KCNA1Q09470 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC16.51■□□□□ 0.23
KCNA1Q09470 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC16.51■□□□□ 0.23
KCNA1Q09470 AC023908.3-201ENST00000564211 3047 ntBASIC16.51■□□□□ 0.23
KCNA1Q09470 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
KCNA1Q09470 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
KCNA1Q09470 AC126755.1-201ENST00000525846 6405 ntBASIC16.51■□□□□ 0.23
KCNA1Q09470 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
KCNA1Q09470 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC16.51■□□□□ 0.23
KCNA1Q09470 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC16.51■□□□□ 0.23
KCNA1Q09470 INTS4P1-203ENST00000641008 3683 ntBASIC16.51■□□□□ 0.23
KCNA1Q09470 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC16.51■□□□□ 0.23
KCNA1Q09470 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
KCNA1Q09470 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
KCNA1Q09470 AC003102.2-201ENST00000589195 1469 ntBASIC16.51■□□□□ 0.23
KCNA1Q09470 ANKRD19P-201ENST00000338192 862 ntBASIC16.51■□□□□ 0.23
KCNA1Q09470 RN7SKP230-201ENST00000365642 335 ntBASIC16.51■□□□□ 0.23
KCNA1Q09470 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
KCNA1Q09470 DBI-203ENST00000393103 599 ntAPPRIS P4 TSL 1 (best) BASIC16.51■□□□□ 0.23
KCNA1Q09470 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC16.51■□□□□ 0.23
KCNA1Q09470 HIST1H2BPS3-201ENST00000419683 341 ntBASIC16.51■□□□□ 0.23
KCNA1Q09470 AC016694.1-201ENST00000434179 700 ntBASIC16.51■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 43.9 ms