Protein–RNA interactions for Protein: Q05655

PRKCD, Protein kinase C delta type, humanhuman

Predictions only

Length 676 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCDQ05655 AC069120.2-201ENST00000524091 540 ntBASIC13.95□□□□□ -0.18
PRKCDQ05655 AC027369.6-201ENST00000525520 931 ntBASIC13.95□□□□□ -0.18
PRKCDQ05655 ZNF890P-202ENST00000530367 1156 ntBASIC13.95□□□□□ -0.18
PRKCDQ05655 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC13.95□□□□□ -0.18
PRKCDQ05655 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
PRKCDQ05655 SAMD11P1-201ENST00000571429 661 ntBASIC13.95□□□□□ -0.18
PRKCDQ05655 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC13.95□□□□□ -0.18
PRKCDQ05655 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
PRKCDQ05655 RAB34-223ENST00000636154 730 ntTSL 2 BASIC13.95□□□□□ -0.18
PRKCDQ05655 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC13.95□□□□□ -0.18
PRKCDQ05655 PTPRO-201ENST00000281171 5301 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
PRKCDQ05655 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
PRKCDQ05655 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
PRKCDQ05655 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
PRKCDQ05655 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC13.95□□□□□ -0.18
PRKCDQ05655 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
PRKCDQ05655 DENND1B-211ENST00000620048 8378 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
PRKCDQ05655 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
PRKCDQ05655 LMAN2L-201ENST00000264963 2397 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
PRKCDQ05655 AC148477.2-201ENST00000537762 3039 ntTSL 3 BASIC13.95□□□□□ -0.18
PRKCDQ05655 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
PRKCDQ05655 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC13.95□□□□□ -0.18
PRKCDQ05655 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC13.95□□□□□ -0.18
PRKCDQ05655 MAP3K4-201ENST00000348824 5295 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
PRKCDQ05655 AL121992.1-201ENST00000428945 2845 ntTSL 2 BASIC13.95□□□□□ -0.18
PRKCDQ05655 SPECC1-202ENST00000395522 2982 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
PRKCDQ05655 SDC1-201ENST00000254351 3147 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
PRKCDQ05655 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
PRKCDQ05655 ALDH3B1-201ENST00000342456 2786 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
PRKCDQ05655 DSN1-207ENST00000448110 2129 ntAPPRIS ALT2 TSL 2 BASIC13.94□□□□□ -0.18
PRKCDQ05655 MPPED2-202ENST00000448418 5591 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
PRKCDQ05655 OPA1-202ENST00000361510 6492 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
PRKCDQ05655 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
PRKCDQ05655 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
PRKCDQ05655 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
PRKCDQ05655 GAK-201ENST00000314167 4442 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
PRKCDQ05655 OPA1-205ENST00000361908 6439 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
PRKCDQ05655 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
PRKCDQ05655 AC113367.3-201ENST00000508316 1912 ntBASIC13.94□□□□□ -0.18
PRKCDQ05655 AC018442.1-201ENST00000421439 2061 ntBASIC13.94□□□□□ -0.18
PRKCDQ05655 SLC9A7P1-202ENST00000556476 2239 ntBASIC13.94□□□□□ -0.18
PRKCDQ05655 AC097359.2-201ENST00000604992 2389 ntBASIC13.94□□□□□ -0.18
PRKCDQ05655 THUMPD3-AS1-202ENST00000468186 3253 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
PRKCDQ05655 SIMC1-205ENST00000443967 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
PRKCDQ05655 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
PRKCDQ05655 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
PRKCDQ05655 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
PRKCDQ05655 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
PRKCDQ05655 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
PRKCDQ05655 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC13.94□□□□□ -0.18
PRKCDQ05655 WRB-204ENST00000398753 699 ntTSL 3 BASIC13.94□□□□□ -0.18
PRKCDQ05655 TCAF2-202ENST00000411935 2906 ntTSL 5 BASIC13.94□□□□□ -0.18
PRKCDQ05655 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC13.94□□□□□ -0.18
PRKCDQ05655 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC13.94□□□□□ -0.18
PRKCDQ05655 TNIK-204ENST00000436636 6970 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
PRKCDQ05655 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
PRKCDQ05655 DNAJB3-202ENST00000449667 1266 ntBASIC13.94□□□□□ -0.18
PRKCDQ05655 KLF2P3-201ENST00000451977 1087 ntBASIC13.94□□□□□ -0.18
PRKCDQ05655 AC125807.1-201ENST00000483097 614 ntBASIC13.94□□□□□ -0.18
PRKCDQ05655 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC13.94□□□□□ -0.18
PRKCDQ05655 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
PRKCDQ05655 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC13.94□□□□□ -0.18
PRKCDQ05655 AC044860.1-202ENST00000559481 777 ntBASIC13.94□□□□□ -0.18
PRKCDQ05655 AC025678.2-201ENST00000562061 970 ntBASIC13.94□□□□□ -0.18
PRKCDQ05655 AC140878.1-201ENST00000565277 250 ntBASIC13.94□□□□□ -0.18
PRKCDQ05655 TBC1D24-205ENST00000567020 6673 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
PRKCDQ05655 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC13.94□□□□□ -0.18
PRKCDQ05655 AC015911.4-201ENST00000588022 1070 ntBASIC13.94□□□□□ -0.18
PRKCDQ05655 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
PRKCDQ05655 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
PRKCDQ05655 ASAH1-258ENST00000637790 3042 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
PRKCDQ05655 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC13.94□□□□□ -0.18
PRKCDQ05655 KCNMA1-262ENST00000639489 4302 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
PRKCDQ05655 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
PRKCDQ05655 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
PRKCDQ05655 NUTM2E-201ENST00000429984 3292 ntAPPRIS P5 TSL 5 BASIC13.94□□□□□ -0.18
PRKCDQ05655 ZCCHC7-209ENST00000534928 2828 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
PRKCDQ05655 PTPA-205ENST00000357197 2653 ntTSL 2 BASIC13.94□□□□□ -0.18
PRKCDQ05655 DNASE1L1-206ENST00000393638 2665 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
PRKCDQ05655 PHYHIP-202ENST00000454243 3200 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
PRKCDQ05655 PLCB3-202ENST00000325234 3946 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
PRKCDQ05655 NEDD4L-205ENST00000400345 3647 ntAPPRIS P4 TSL 1 (best) BASIC13.94□□□□□ -0.18
PRKCDQ05655 RER1-207ENST00000488353 2469 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
PRKCDQ05655 SF1-209ENST00000433274 2317 ntTSL 2 BASIC13.93□□□□□ -0.18
PRKCDQ05655 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
PRKCDQ05655 PTENP1-202ENST00000532280 3996 ntBASIC13.93□□□□□ -0.18
PRKCDQ05655 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC13.93□□□□□ -0.18
PRKCDQ05655 RAPH1-202ENST00000319170 9808 ntAPPRIS P4 TSL 1 (best) BASIC13.93□□□□□ -0.18
PRKCDQ05655 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC13.93□□□□□ -0.18
PRKCDQ05655 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
PRKCDQ05655 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC13.93□□□□□ -0.18
PRKCDQ05655 ACAN-202ENST00000439576 8840 ntAPPRIS P2 TSL 5 BASIC13.93□□□□□ -0.18
PRKCDQ05655 TMEM231-207ENST00000568377 2920 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
PRKCDQ05655 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
PRKCDQ05655 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC13.93□□□□□ -0.18
PRKCDQ05655 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
PRKCDQ05655 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC13.93□□□□□ -0.18
PRKCDQ05655 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
PRKCDQ05655 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC13.93□□□□□ -0.18
PRKCDQ05655 PKIG-203ENST00000372887 769 ntTSL 3 BASIC13.93□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 49.4 ms