Protein–RNA interactions for Protein: Q00535

CDK5, Cyclin-dependent-like kinase 5, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5Q00535 NPRL3-212ENST00000620134 3203 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CDK5Q00535 NR1H3-221ENST00000481889 1704 ntTSL 5 BASIC13.61□□□□□ -0.23
CDK5Q00535 AC097376.2-205ENST00000610159 5334 ntBASIC13.61□□□□□ -0.23
CDK5Q00535 WDR77-201ENST00000235090 2576 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CDK5Q00535 LMX1B-201ENST00000355497 5809 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CDK5Q00535 AC020910.6-201ENST00000623084 1459 ntBASIC13.61□□□□□ -0.23
CDK5Q00535 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC13.61□□□□□ -0.23
CDK5Q00535 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CDK5Q00535 SYNRG-225ENST00000619541 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
CDK5Q00535 KCTD3-201ENST00000259154 3931 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CDK5Q00535 TTC28-AS1-212ENST00000433317 3080 ntTSL 5 BASIC13.6□□□□□ -0.23
CDK5Q00535 DSEL-201ENST00000310045 9531 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
CDK5Q00535 FKBP5-203ENST00000539068 3827 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CDK5Q00535 ADAMTS14-202ENST00000373208 5269 ntAPPRIS P4 TSL 2 BASIC13.6□□□□□ -0.23
CDK5Q00535 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CDK5Q00535 B3GNT7-201ENST00000287590 3706 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CDK5Q00535 KCNJ11-204ENST00000528731 2146 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
CDK5Q00535 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC13.6□□□□□ -0.23
CDK5Q00535 EIF4G1-212ENST00000424196 5653 ntTSL 2 BASIC13.6□□□□□ -0.23
CDK5Q00535 ELN-208ENST00000380575 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
CDK5Q00535 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC13.6□□□□□ -0.23
CDK5Q00535 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC13.6□□□□□ -0.23
CDK5Q00535 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CDK5Q00535 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
CDK5Q00535 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CDK5Q00535 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
CDK5Q00535 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC13.6□□□□□ -0.23
CDK5Q00535 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
CDK5Q00535 RPSAP43-201ENST00000402237 625 ntBASIC13.6□□□□□ -0.23
CDK5Q00535 HLA-DPA1-242ENST00000419277 1704 ntAPPRIS P2 BASIC13.6□□□□□ -0.23
CDK5Q00535 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC13.6□□□□□ -0.23
CDK5Q00535 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
CDK5Q00535 LY6E-204ENST00000519546 971 ntTSL 2 BASIC13.6□□□□□ -0.23
CDK5Q00535 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC13.6□□□□□ -0.23
CDK5Q00535 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC13.6□□□□□ -0.23
CDK5Q00535 AC012617.1-204ENST00000586340 2305 ntBASIC13.6□□□□□ -0.23
CDK5Q00535 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC13.6□□□□□ -0.23
CDK5Q00535 AC112229.3-201ENST00000603767 3202 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
CDK5Q00535 AL844908.2-201ENST00000609461 460 ntBASIC13.6□□□□□ -0.23
CDK5Q00535 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
CDK5Q00535 SDK1-210ENST00000615806 10258 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
CDK5Q00535 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
CDK5Q00535 PPP1R26P4-201ENST00000619065 3527 ntBASIC13.6□□□□□ -0.23
CDK5Q00535 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC13.6□□□□□ -0.23
CDK5Q00535 AC013271.1-201ENST00000640669 3202 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
CDK5Q00535 PAPSS2-202ENST00000456849 3856 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
CDK5Q00535 ZKSCAN4-201ENST00000377294 2375 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CDK5Q00535 THY1-206ENST00000528522 2050 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
CDK5Q00535 AC055854.1-203ENST00000521141 1630 ntTSL 5 BASIC13.6□□□□□ -0.23
CDK5Q00535 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
CDK5Q00535 MINDY4-201ENST00000265299 2733 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CDK5Q00535 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CDK5Q00535 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC13.6□□□□□ -0.23
CDK5Q00535 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC13.6□□□□□ -0.23
CDK5Q00535 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
CDK5Q00535 AC010247.2-201ENST00000559786 1955 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
CDK5Q00535 YTHDF2-201ENST00000373812 2925 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CDK5Q00535 AL138799.1-201ENST00000448213 1675 ntBASIC13.59□□□□□ -0.23
CDK5Q00535 NT5C3A-213ENST00000610140 1670 ntAPPRIS ALT1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CDK5Q00535 GGT5-202ENST00000327365 2494 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
CDK5Q00535 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC13.59□□□□□ -0.23
CDK5Q00535 MROH1-207ENST00000528919 5234 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
CDK5Q00535 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
CDK5Q00535 KIF17-201ENST00000247986 3969 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
CDK5Q00535 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
CDK5Q00535 GAS2L2-202ENST00000604641 3014 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
CDK5Q00535 SLCO2B1-203ENST00000428359 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
CDK5Q00535 MTRF1L-202ENST00000367231 3539 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
CDK5Q00535 MED15-203ENST00000382974 2235 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
CDK5Q00535 MKNK1-204ENST00000371946 2719 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
CDK5Q00535 KCNH6-202ENST00000456941 2928 ntTSL 5 BASIC13.59□□□□□ -0.23
CDK5Q00535 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
CDK5Q00535 ZW10-201ENST00000200135 2992 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CDK5Q00535 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
CDK5Q00535 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC13.59□□□□□ -0.23
CDK5Q00535 AC016876.1-201ENST00000415124 352 ntTSL 3 BASIC13.59□□□□□ -0.23
CDK5Q00535 AC254562.1-201ENST00000417586 456 ntBASIC13.59□□□□□ -0.23
CDK5Q00535 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC13.59□□□□□ -0.23
CDK5Q00535 COX10-202ENST00000429152 875 ntTSL 2 BASIC13.59□□□□□ -0.23
CDK5Q00535 AC114501.2-201ENST00000439631 535 ntBASIC13.59□□□□□ -0.23
CDK5Q00535 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
CDK5Q00535 HLA-J-203ENST00000494367 1087 ntBASIC13.59□□□□□ -0.23
CDK5Q00535 MEIS3P1-201ENST00000495167 958 ntBASIC13.59□□□□□ -0.23
CDK5Q00535 ATP6V1C1-202ENST00000518738 2130 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CDK5Q00535 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC13.59□□□□□ -0.23
CDK5Q00535 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
CDK5Q00535 CUL7-203ENST00000535468 5504 ntAPPRIS ALT2 TSL 2 BASIC13.59□□□□□ -0.23
CDK5Q00535 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
CDK5Q00535 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
CDK5Q00535 DUX4L47-201ENST00000566374 394 ntBASIC13.59□□□□□ -0.23
CDK5Q00535 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC13.59□□□□□ -0.23
CDK5Q00535 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC13.59□□□□□ -0.23
CDK5Q00535 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC13.59□□□□□ -0.23
CDK5Q00535 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC13.59□□□□□ -0.23
CDK5Q00535 RAF1-201ENST00000251849 3300 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CDK5Q00535 NTRK2-201ENST00000277120 8633 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
CDK5Q00535 CAMKK2-201ENST00000324774 5598 ntAPPRIS P4 TSL 1 (best) BASIC13.59□□□□□ -0.23
CDK5Q00535 WNT9B-202ENST00000393461 2654 ntTSL 2 BASIC13.59□□□□□ -0.23
CDK5Q00535 OR2V1-202ENST00000641318 2665 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
CDK5Q00535 TTC7A-203ENST00000409245 3033 ntTSL 2 BASIC13.59□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 47.7 ms