Protein–RNA interactions for Protein: P78415

IRX3, Iroquois-class homeodomain protein IRX-3, humanhuman

Predicted RBP Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRX3P78415 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
IRX3P78415 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
IRX3P78415 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC17.58■□□□□ 0.41
IRX3P78415 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
IRX3P78415 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC17.58■□□□□ 0.41
IRX3P78415 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.41
IRX3P78415 MAGEA4-205ENST00000393920 1721 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.41
IRX3P78415 KATNB1-201ENST00000379661 2664 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.41
IRX3P78415 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC17.58■□□□□ 0.41
IRX3P78415 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
IRX3P78415 GNAI2-207ENST00000451956 1486 ntTSL 2 BASIC17.58■□□□□ 0.41
IRX3P78415 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC17.58■□□□□ 0.41
IRX3P78415 C7orf33-201ENST00000307003 1354 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
IRX3P78415 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
IRX3P78415 LINC00327-203ENST00000576696 1308 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
IRX3P78415 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
IRX3P78415 GNAI2-201ENST00000266027 2169 ntTSL 2 BASIC17.58■□□□□ 0.4
IRX3P78415 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
IRX3P78415 KIFC3-207ENST00000543930 3018 ntTSL 2 BASIC17.58■□□□□ 0.4
IRX3P78415 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
IRX3P78415 AL136309.1-201ENST00000403917 691 ntBASIC17.58■□□□□ 0.4
IRX3P78415 AC012506.3-201ENST00000415245 892 ntTSL 3 BASIC17.58■□□□□ 0.4
IRX3P78415 NREP-204ENST00000419114 704 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
IRX3P78415 AC016825.1-201ENST00000433600 778 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
IRX3P78415 CHMP1AP1-201ENST00000445563 662 ntBASIC17.58■□□□□ 0.4
IRX3P78415 SPTLC1P5-201ENST00000450718 252 ntBASIC17.58■□□□□ 0.4
IRX3P78415 FTLP10-202ENST00000505798 471 ntBASIC17.58■□□□□ 0.4
IRX3P78415 AC100850.1-201ENST00000506768 649 ntBASIC17.58■□□□□ 0.4
IRX3P78415 AC005740.2-201ENST00000511085 419 ntBASIC17.58■□□□□ 0.4
IRX3P78415 SDHD-202ENST00000525291 790 ntTSL 3 BASIC17.58■□□□□ 0.4
IRX3P78415 ZNF385A-213ENST00000551771 1111 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
IRX3P78415 CHMP4BP1-201ENST00000556017 588 ntBASIC17.58■□□□□ 0.4
IRX3P78415 AC011474.2-201ENST00000579268 543 ntTSL 3 BASIC17.58■□□□□ 0.4
IRX3P78415 LINC01278-203ENST00000608788 820 ntTSL 5 BASIC17.58■□□□□ 0.4
IRX3P78415 LINC01278-207ENST00000610234 555 ntTSL 4 BASIC17.58■□□□□ 0.4
IRX3P78415 AP001505.2-201ENST00000616815 443 ntBASIC17.58■□□□□ 0.4
IRX3P78415 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
IRX3P78415 AC091544.8-201ENST00000619490 361 ntBASIC17.58■□□□□ 0.4
IRX3P78415 MEF2C-227ENST00000626391 1182 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
IRX3P78415 MEF2C-231ENST00000628656 1254 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
IRX3P78415 LINC01668-201ENST00000635001 513 ntTSL 4 BASIC17.58■□□□□ 0.4
IRX3P78415 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC17.58■□□□□ 0.4
IRX3P78415 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
IRX3P78415 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC17.58■□□□□ 0.4
IRX3P78415 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC17.58■□□□□ 0.4
IRX3P78415 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC17.58■□□□□ 0.4
IRX3P78415 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC17.58■□□□□ 0.4
IRX3P78415 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC17.58■□□□□ 0.4
IRX3P78415 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
IRX3P78415 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC17.58■□□□□ 0.4
IRX3P78415 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
IRX3P78415 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
IRX3P78415 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
IRX3P78415 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC17.58■□□□□ 0.4
IRX3P78415 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC17.58■□□□□ 0.4
IRX3P78415 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
IRX3P78415 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC17.58■□□□□ 0.4
IRX3P78415 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC17.57■□□□□ 0.4
IRX3P78415 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
IRX3P78415 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
IRX3P78415 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC17.57■□□□□ 0.4
IRX3P78415 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
IRX3P78415 ING5-213ENST00000636051 4199 ntTSL 5 BASIC17.57■□□□□ 0.4
IRX3P78415 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
IRX3P78415 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
IRX3P78415 KYAT1-205ENST00000436267 2487 ntTSL 2 BASIC17.57■□□□□ 0.4
IRX3P78415 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
IRX3P78415 AC092384.3-202ENST00000564646 2873 ntBASIC17.57■□□□□ 0.4
IRX3P78415 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
IRX3P78415 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC17.57■□□□□ 0.4
IRX3P78415 SLC25A26-201ENST00000336733 1023 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
IRX3P78415 AL008707.1-201ENST00000422498 534 ntBASIC17.57■□□□□ 0.4
IRX3P78415 PCOLCE2-208ENST00000485766 1088 ntTSL 5 BASIC17.57■□□□□ 0.4
IRX3P78415 MSRB3-209ENST00000540804 884 ntTSL 2 BASIC17.57■□□□□ 0.4
IRX3P78415 AC126696.1-201ENST00000561567 756 ntTSL 3 BASIC17.57■□□□□ 0.4
IRX3P78415 FXYD6-217ENST00000584394 669 ntTSL 3 BASIC17.57■□□□□ 0.4
IRX3P78415 FBXL12-204ENST00000586469 544 ntTSL 2 BASIC17.57■□□□□ 0.4
IRX3P78415 AC010323.1-201ENST00000598884 580 ntAPPRIS P1 TSL 4 BASIC17.57■□□□□ 0.4
IRX3P78415 AC138466.3-201ENST00000619983 221 ntBASIC17.57■□□□□ 0.4
IRX3P78415 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC17.57■□□□□ 0.4
IRX3P78415 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC17.57■□□□□ 0.4
IRX3P78415 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC17.57■□□□□ 0.4
IRX3P78415 FLJ16779-201ENST00000612722 7638 ntBASIC17.57■□□□□ 0.4
IRX3P78415 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC17.57■□□□□ 0.4
IRX3P78415 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
IRX3P78415 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
IRX3P78415 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
IRX3P78415 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
IRX3P78415 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
IRX3P78415 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC17.56■□□□□ 0.4
IRX3P78415 KRT8P19-201ENST00000551916 1455 ntBASIC17.56■□□□□ 0.4
IRX3P78415 HSD17B4-206ENST00000504811 2740 ntTSL 2 BASIC17.56■□□□□ 0.4
IRX3P78415 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
IRX3P78415 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
IRX3P78415 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
IRX3P78415 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
IRX3P78415 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC17.56■□□□□ 0.4
IRX3P78415 CDK11B-203ENST00000341832 2998 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
IRX3P78415 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
IRX3P78415 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 54.2 ms