Protein–RNA interactions for Protein: P68431

HIST1H3A, Histone H3.1, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H3AP68431 AC009486.1-201ENST00000569860 813 ntBASIC13.18□□□□□ -0.3
HIST1H3AP68431 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
HIST1H3AP68431 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC13.18□□□□□ -0.3
HIST1H3AP68431 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
HIST1H3AP68431 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
HIST1H3AP68431 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
HIST1H3AP68431 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
HIST1H3AP68431 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
HIST1H3AP68431 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC13.18□□□□□ -0.3
HIST1H3AP68431 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
HIST1H3AP68431 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC13.18□□□□□ -0.3
HIST1H3AP68431 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
HIST1H3AP68431 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
HIST1H3AP68431 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC13.18□□□□□ -0.3
HIST1H3AP68431 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
HIST1H3AP68431 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
HIST1H3AP68431 SOGA3-201ENST00000465909 3756 ntTSL 5 BASIC13.18□□□□□ -0.3
HIST1H3AP68431 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
HIST1H3AP68431 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
HIST1H3AP68431 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC13.17□□□□□ -0.3
HIST1H3AP68431 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC13.17□□□□□ -0.3
HIST1H3AP68431 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
HIST1H3AP68431 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC13.17□□□□□ -0.3
HIST1H3AP68431 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
HIST1H3AP68431 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC13.17□□□□□ -0.3
HIST1H3AP68431 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
HIST1H3AP68431 MLLT6-211ENST00000621332 7578 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
HIST1H3AP68431 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
HIST1H3AP68431 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
HIST1H3AP68431 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
HIST1H3AP68431 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC13.17□□□□□ -0.3
HIST1H3AP68431 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
HIST1H3AP68431 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
HIST1H3AP68431 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
HIST1H3AP68431 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
HIST1H3AP68431 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
HIST1H3AP68431 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
HIST1H3AP68431 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
HIST1H3AP68431 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
HIST1H3AP68431 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
HIST1H3AP68431 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
HIST1H3AP68431 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
HIST1H3AP68431 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
HIST1H3AP68431 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC13.17□□□□□ -0.3
HIST1H3AP68431 DGCR5-201ENST00000399539 862 ntBASIC13.17□□□□□ -0.3
HIST1H3AP68431 TPT1P11-201ENST00000458482 498 ntBASIC13.17□□□□□ -0.3
HIST1H3AP68431 KRT18P25-201ENST00000508931 1278 ntBASIC13.17□□□□□ -0.3
HIST1H3AP68431 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC13.17□□□□□ -0.3
HIST1H3AP68431 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC13.17□□□□□ -0.3
HIST1H3AP68431 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC13.17□□□□□ -0.3
HIST1H3AP68431 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC13.17□□□□□ -0.3
HIST1H3AP68431 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC13.17□□□□□ -0.3
HIST1H3AP68431 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
HIST1H3AP68431 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC13.17□□□□□ -0.3
HIST1H3AP68431 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC13.17□□□□□ -0.3
HIST1H3AP68431 RPSAP52-203ENST00000622976 1023 ntBASIC13.17□□□□□ -0.3
HIST1H3AP68431 AL033527.5-201ENST00000641382 801 ntBASIC13.17□□□□□ -0.3
HIST1H3AP68431 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
HIST1H3AP68431 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC13.17□□□□□ -0.3
HIST1H3AP68431 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
HIST1H3AP68431 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
HIST1H3AP68431 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
HIST1H3AP68431 LRRC59-203ENST00000576448 1531 ntBASIC13.17□□□□□ -0.3
HIST1H3AP68431 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
HIST1H3AP68431 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
HIST1H3AP68431 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
HIST1H3AP68431 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
HIST1H3AP68431 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC13.17□□□□□ -0.3
HIST1H3AP68431 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC13.17□□□□□ -0.3
HIST1H3AP68431 PHLDA1-201ENST00000266671 8069 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
HIST1H3AP68431 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
HIST1H3AP68431 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
HIST1H3AP68431 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC13.16□□□□□ -0.3
HIST1H3AP68431 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
HIST1H3AP68431 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
HIST1H3AP68431 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC13.16□□□□□ -0.3
HIST1H3AP68431 KRT8P35-201ENST00000483942 1338 ntBASIC13.16□□□□□ -0.3
HIST1H3AP68431 AL354702.1-201ENST00000442006 1960 ntBASIC13.16□□□□□ -0.3
HIST1H3AP68431 MX1-218ENST00000619682 1980 ntTSL 5 BASIC13.16□□□□□ -0.3
HIST1H3AP68431 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC13.16□□□□□ -0.3
HIST1H3AP68431 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
HIST1H3AP68431 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC13.16□□□□□ -0.3
HIST1H3AP68431 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
HIST1H3AP68431 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
HIST1H3AP68431 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC13.16□□□□□ -0.3
HIST1H3AP68431 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
HIST1H3AP68431 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC13.16□□□□□ -0.3
HIST1H3AP68431 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC13.16□□□□□ -0.3
HIST1H3AP68431 RPP14-202ENST00000445193 7985 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
HIST1H3AP68431 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC13.16□□□□□ -0.3
HIST1H3AP68431 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC13.16□□□□□ -0.3
HIST1H3AP68431 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC13.16□□□□□ -0.3
HIST1H3AP68431 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
HIST1H3AP68431 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
HIST1H3AP68431 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC13.16□□□□□ -0.3
HIST1H3AP68431 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
HIST1H3AP68431 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
HIST1H3AP68431 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
HIST1H3AP68431 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
HIST1H3AP68431 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 86.6 ms