Protein–RNA interactions for Protein: P61968

LMO4, LIM domain transcription factor LMO4, humanhuman

Predictions only

Length 165 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4P61968 AC012618.1-201ENST00000461223 412 ntBASIC12.25□□□□□ -0.45
LMO4P61968 AC010973.2-201ENST00000485974 1230 ntTSL 2 BASIC12.25□□□□□ -0.45
LMO4P61968 CLDN11-207ENST00000486975 1139 ntTSL 2 BASIC12.25□□□□□ -0.45
LMO4P61968 PMP22-206ENST00000494511 872 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
LMO4P61968 TMBIM4-205ENST00000535812 766 ntTSL 4 BASIC12.25□□□□□ -0.45
LMO4P61968 SPAG5-AS1-203ENST00000554154 491 ntTSL 2 BASIC12.25□□□□□ -0.45
LMO4P61968 FOS-206ENST00000555347 1280 ntTSL 2 BASIC12.25□□□□□ -0.45
LMO4P61968 TMBIM4-212ENST00000556010 610 ntTSL 5 BASIC12.25□□□□□ -0.45
LMO4P61968 AC068152.1-201ENST00000575930 685 ntTSL 5 BASIC12.25□□□□□ -0.45
LMO4P61968 AC011474.2-201ENST00000579268 543 ntTSL 3 BASIC12.25□□□□□ -0.45
LMO4P61968 RN7SL574P-201ENST00000581512 297 ntBASIC12.25□□□□□ -0.45
LMO4P61968 PYY-202ENST00000592796 580 ntAPPRIS ALT1 TSL 1 (best) BASIC12.25□□□□□ -0.45
LMO4P61968 CASP6-202ENST00000352981 1347 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
LMO4P61968 CTSW-204ENST00000528419 1341 ntTSL 2 BASIC12.25□□□□□ -0.45
LMO4P61968 CICP6-201ENST00000457191 2729 ntBASIC12.25□□□□□ -0.45
LMO4P61968 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
LMO4P61968 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC12.25□□□□□ -0.45
LMO4P61968 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC12.25□□□□□ -0.45
LMO4P61968 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
LMO4P61968 WDR83-201ENST00000418543 1457 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
LMO4P61968 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
LMO4P61968 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
LMO4P61968 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC12.25□□□□□ -0.45
LMO4P61968 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
LMO4P61968 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
LMO4P61968 AMT-204ENST00000427987 1646 ntTSL 5 BASIC12.25□□□□□ -0.45
LMO4P61968 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC12.25□□□□□ -0.45
LMO4P61968 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
LMO4P61968 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
LMO4P61968 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
LMO4P61968 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
LMO4P61968 GOLGA8S-201ENST00000562295 1878 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
LMO4P61968 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC12.25□□□□□ -0.45
LMO4P61968 ACE3P-201ENST00000423435 1973 ntBASIC12.25□□□□□ -0.45
LMO4P61968 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC12.25□□□□□ -0.45
LMO4P61968 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
LMO4P61968 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
LMO4P61968 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
LMO4P61968 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
LMO4P61968 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC12.25□□□□□ -0.45
LMO4P61968 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
LMO4P61968 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC12.24□□□□□ -0.45
LMO4P61968 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
LMO4P61968 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC12.24□□□□□ -0.45
LMO4P61968 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
LMO4P61968 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC12.24□□□□□ -0.45
LMO4P61968 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
LMO4P61968 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
LMO4P61968 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
LMO4P61968 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
LMO4P61968 HMGN3-201ENST00000275036 831 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
LMO4P61968 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
LMO4P61968 CSRP1-201ENST00000340006 1952 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
LMO4P61968 RAB36-202ENST00000341989 936 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
LMO4P61968 HMGN3-202ENST00000344726 872 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
LMO4P61968 NRM-202ENST00000376420 1228 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
LMO4P61968 ADAMTSL1-204ENST00000380545 1562 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
LMO4P61968 FAM177A1-202ENST00000382406 858 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
LMO4P61968 AC245369.1-201ENST00000390634 434 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
LMO4P61968 CCDC51-201ENST00000395694 1560 ntAPPRIS P1 TSL 2 BASIC12.24□□□□□ -0.45
LMO4P61968 HNRNPA1P41-201ENST00000397777 928 ntBASIC12.24□□□□□ -0.45
LMO4P61968 AC092506.1-202ENST00000401022 528 ntBASIC12.24□□□□□ -0.45
LMO4P61968 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
LMO4P61968 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC12.24□□□□□ -0.45
LMO4P61968 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
LMO4P61968 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC12.24□□□□□ -0.45
LMO4P61968 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC12.24□□□□□ -0.45
LMO4P61968 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
LMO4P61968 DGUOK-AS1-202ENST00000439192 563 ntTSL 2 BASIC12.24□□□□□ -0.45
LMO4P61968 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC12.24□□□□□ -0.45
LMO4P61968 NUP210P1-202ENST00000504322 710 ntBASIC12.24□□□□□ -0.45
LMO4P61968 LEF1-AS1-204ENST00000508266 559 ntTSL 4 BASIC12.24□□□□□ -0.45
LMO4P61968 CPLX2-209ENST00000515094 576 ntAPPRIS P1 TSL 4 BASIC12.24□□□□□ -0.45
LMO4P61968 FADS2-212ENST00000522639 360 ntTSL 5 BASIC12.24□□□□□ -0.45
LMO4P61968 AC015689.1-201ENST00000525365 462 ntTSL 2 BASIC12.24□□□□□ -0.45
LMO4P61968 AC136759.1-202ENST00000530858 2194 ntBASIC12.24□□□□□ -0.45
LMO4P61968 AC117500.3-201ENST00000537032 666 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
LMO4P61968 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC12.24□□□□□ -0.45
LMO4P61968 SLC8B1-202ENST00000546737 1656 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
LMO4P61968 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC12.24□□□□□ -0.45
LMO4P61968 MYL6-219ENST00000551589 1438 ntAPPRIS ALT1 TSL 2 BASIC12.24□□□□□ -0.45
LMO4P61968 CDIP1-202ENST00000562334 1205 ntTSL 2 BASIC12.24□□□□□ -0.45
LMO4P61968 AC013726.1-201ENST00000563747 2285 ntBASIC12.24□□□□□ -0.45
LMO4P61968 AL109954.1-202ENST00000564051 2148 ntBASIC12.24□□□□□ -0.45
LMO4P61968 FADS2-215ENST00000574708 385 ntTSL 3 BASIC12.24□□□□□ -0.45
LMO4P61968 PAM16-211ENST00000575848 518 ntTSL 3 BASIC12.24□□□□□ -0.45
LMO4P61968 PAM16-214ENST00000576217 493 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
LMO4P61968 AC127024.2-201ENST00000581019 789 ntTSL 5 BASIC12.24□□□□□ -0.45
LMO4P61968 AC016629.1-201ENST00000596579 586 ntBASIC12.24□□□□□ -0.45
LMO4P61968 ZFP36-203ENST00000597629 1786 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
LMO4P61968 HDDC2-204ENST00000608295 879 ntTSL 5 BASIC12.24□□□□□ -0.45
LMO4P61968 CD48-203ENST00000613788 1500 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
LMO4P61968 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
LMO4P61968 LINC01101-201ENST00000622953 1884 ntBASIC12.24□□□□□ -0.45
LMO4P61968 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC12.24□□□□□ -0.45
LMO4P61968 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
LMO4P61968 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC12.24□□□□□ -0.45
LMO4P61968 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
LMO4P61968 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC12.23□□□□□ -0.45
LMO4P61968 API5-203ENST00000455725 2257 ntTSL 2 BASIC12.23□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms