Protein–RNA interactions for Protein: P61619

SEC61A1, Protein transport protein Sec61 subunit alpha isoform 1, humanhuman

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1P61619 AC011462.1-202ENST00000540732 1960 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
SEC61A1P61619 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SEC61A1P61619 CARHSP1-220ENST00000619881 2849 ntAPPRIS P1 TSL 3 BASIC13.31□□□□□ -0.28
SEC61A1P61619 RPS6KA4-202ENST00000528057 3121 ntAPPRIS ALT1 TSL 1 (best) BASIC13.3□□□□□ -0.28
SEC61A1P61619 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
SEC61A1P61619 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
SEC61A1P61619 MYADM-203ENST00000391769 3186 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
SEC61A1P61619 RNF183-206ENST00000478815 2312 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
SEC61A1P61619 VSIR-201ENST00000394957 4689 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
SEC61A1P61619 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
SEC61A1P61619 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
SEC61A1P61619 NUBPL-201ENST00000281081 3049 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
SEC61A1P61619 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
SEC61A1P61619 CSRP1-202ENST00000367306 2129 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
SEC61A1P61619 PPP5D1-201ENST00000414155 1882 ntAPPRIS P5 TSL 2 BASIC13.3□□□□□ -0.28
SEC61A1P61619 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC13.3□□□□□ -0.28
SEC61A1P61619 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
SEC61A1P61619 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC13.3□□□□□ -0.28
SEC61A1P61619 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
SEC61A1P61619 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC13.3□□□□□ -0.28
SEC61A1P61619 PNKD-204ENST00000436005 978 ntTSL 5 BASIC13.3□□□□□ -0.28
SEC61A1P61619 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
SEC61A1P61619 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC13.3□□□□□ -0.28
SEC61A1P61619 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC13.3□□□□□ -0.28
SEC61A1P61619 AC190387.1-201ENST00000551683 408 ntBASIC13.3□□□□□ -0.28
SEC61A1P61619 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC13.3□□□□□ -0.28
SEC61A1P61619 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC13.3□□□□□ -0.28
SEC61A1P61619 AL356805.1-201ENST00000556383 341 ntTSL 3 BASIC13.3□□□□□ -0.28
SEC61A1P61619 TEX48-202ENST00000612244 662 ntTSL 3 BASIC13.3□□□□□ -0.28
SEC61A1P61619 MIR6069-201ENST00000620069 79 ntBASIC13.3□□□□□ -0.28
SEC61A1P61619 ABCG2-201ENST00000237612 4479 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
SEC61A1P61619 TMUB2-202ENST00000357984 1921 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
SEC61A1P61619 SPECC1-202ENST00000395522 2982 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
SEC61A1P61619 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
SEC61A1P61619 OFD1-204ENST00000398395 3307 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
SEC61A1P61619 ATP13A2-202ENST00000341676 3681 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
SEC61A1P61619 RSPO3-201ENST00000356698 2697 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
SEC61A1P61619 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC13.3□□□□□ -0.28
SEC61A1P61619 PCDHA11-201ENST00000398640 6115 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
SEC61A1P61619 ZC3HAV1-203ENST00000464606 4776 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
SEC61A1P61619 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
SEC61A1P61619 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
SEC61A1P61619 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC13.3□□□□□ -0.28
SEC61A1P61619 AL359881.3-201ENST00000602640 1721 ntBASIC13.3□□□□□ -0.28
SEC61A1P61619 COL6A4P2-202ENST00000504443 2753 ntBASIC13.3□□□□□ -0.28
SEC61A1P61619 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
SEC61A1P61619 PHKG1-210ENST00000537360 2139 ntAPPRIS ALT1 TSL 1 (best) BASIC13.3□□□□□ -0.28
SEC61A1P61619 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC13.3□□□□□ -0.28
SEC61A1P61619 SPPL2A-201ENST00000261854 7372 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
SEC61A1P61619 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
SEC61A1P61619 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
SEC61A1P61619 TCAF1P1-201ENST00000414990 2232 ntBASIC13.29□□□□□ -0.28
SEC61A1P61619 B3GNT7-201ENST00000287590 3706 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
SEC61A1P61619 PEX5-207ENST00000455147 2689 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
SEC61A1P61619 NDFIP2-205ENST00000612570 4648 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
SEC61A1P61619 PTPN9-201ENST00000306726 3862 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
SEC61A1P61619 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
SEC61A1P61619 TICRR-202ENST00000560985 6656 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
SEC61A1P61619 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
SEC61A1P61619 INTS4P1-203ENST00000641008 3683 ntBASIC13.29□□□□□ -0.28
SEC61A1P61619 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
SEC61A1P61619 TNFRSF11A-206ENST00000617039 3756 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
SEC61A1P61619 AKAP12-204ENST00000402676 8432 ntAPPRIS P4 TSL 5 BASIC13.29□□□□□ -0.28
SEC61A1P61619 RPS6KC1-207ENST00000543470 4227 ntTSL 2 BASIC13.29□□□□□ -0.28
SEC61A1P61619 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
SEC61A1P61619 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
SEC61A1P61619 RASL12-203ENST00000434605 982 ntTSL 2 BASIC13.29□□□□□ -0.28
SEC61A1P61619 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
SEC61A1P61619 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC13.29□□□□□ -0.28
SEC61A1P61619 CRB3P1-201ENST00000449338 276 ntBASIC13.29□□□□□ -0.28
SEC61A1P61619 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC13.29□□□□□ -0.28
SEC61A1P61619 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC13.29□□□□□ -0.28
SEC61A1P61619 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC13.29□□□□□ -0.28
SEC61A1P61619 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC13.29□□□□□ -0.28
SEC61A1P61619 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC13.29□□□□□ -0.28
SEC61A1P61619 ZNF890P-202ENST00000530367 1156 ntBASIC13.29□□□□□ -0.28
SEC61A1P61619 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC13.29□□□□□ -0.28
SEC61A1P61619 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
SEC61A1P61619 SPIB-207ENST00000597855 564 ntTSL 4 BASIC13.29□□□□□ -0.28
SEC61A1P61619 SUGP2-215ENST00000601879 5546 ntAPPRIS P3 TSL 2 BASIC13.29□□□□□ -0.28
SEC61A1P61619 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC13.29□□□□□ -0.28
SEC61A1P61619 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC13.29□□□□□ -0.28
SEC61A1P61619 AC004461.2-201ENST00000629517 803 ntBASIC13.29□□□□□ -0.28
SEC61A1P61619 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
SEC61A1P61619 PELP1-212ENST00000574876 3465 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
SEC61A1P61619 CNN2-201ENST00000263097 2179 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
SEC61A1P61619 CNN2-205ENST00000562958 2194 ntTSL 2 BASIC13.29□□□□□ -0.28
SEC61A1P61619 ANK1-202ENST00000289734 8297 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
SEC61A1P61619 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
SEC61A1P61619 SLC16A1-207ENST00000538576 4374 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
SEC61A1P61619 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC13.29□□□□□ -0.28
SEC61A1P61619 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
SEC61A1P61619 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
SEC61A1P61619 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC13.29□□□□□ -0.28
SEC61A1P61619 DMTN-214ENST00000519907 2658 ntTSL 5 BASIC13.29□□□□□ -0.28
SEC61A1P61619 SLC4A11-202ENST00000380059 3229 ntAPPRIS ALT2 TSL 2 BASIC13.29□□□□□ -0.28
SEC61A1P61619 CGN-201ENST00000271636 5091 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
SEC61A1P61619 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC13.29□□□□□ -0.28
SEC61A1P61619 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
SEC61A1P61619 FLII-221ENST00000578558 2377 ntTSL 5 BASIC13.29□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms