Protein–RNA interactions for Protein: P60608

ERVFC1-1, Endogenous retrovirus group FC1 member 1 Env polyprotein, humanhuman

Predictions only

Length 527 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERVFC1-1P60608 BEND3P3-201ENST00000611030 2440 ntBASIC11.81□□□□□ -0.52
ERVFC1-1P60608 MOGAT3-201ENST00000223114 2132 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
ERVFC1-1P60608 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC11.81□□□□□ -0.52
ERVFC1-1P60608 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
ERVFC1-1P60608 SPATS2-203ENST00000547865 1810 ntTSL 2 BASIC11.81□□□□□ -0.52
ERVFC1-1P60608 ZNF335-201ENST00000322927 4430 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
ERVFC1-1P60608 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC11.81□□□□□ -0.52
ERVFC1-1P60608 CACNA1G-226ENST00000513689 6879 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
ERVFC1-1P60608 CACNA1G-228ENST00000514079 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
ERVFC1-1P60608 CACNA1G-231ENST00000515165 6870 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
ERVFC1-1P60608 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC11.81□□□□□ -0.52
ERVFC1-1P60608 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
ERVFC1-1P60608 CPEB4-208ENST00000520867 2607 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
ERVFC1-1P60608 DNMT3B-202ENST00000328111 4336 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
ERVFC1-1P60608 ZNF576-203ENST00000525771 2327 ntAPPRIS P1 TSL 2 BASIC11.81□□□□□ -0.52
ERVFC1-1P60608 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC11.81□□□□□ -0.52
ERVFC1-1P60608 CTBP1-AS-201ENST00000625256 3886 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
ERVFC1-1P60608 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC11.81□□□□□ -0.52
ERVFC1-1P60608 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC11.81□□□□□ -0.52
ERVFC1-1P60608 CNP-202ENST00000393892 5217 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
ERVFC1-1P60608 AL691432.1-201ENST00000596308 1422 ntBASIC11.81□□□□□ -0.52
ERVFC1-1P60608 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
ERVFC1-1P60608 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC11.81□□□□□ -0.52
ERVFC1-1P60608 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
ERVFC1-1P60608 TEX30-205ENST00000376029 959 ntTSL 2 BASIC11.81□□□□□ -0.52
ERVFC1-1P60608 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
ERVFC1-1P60608 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC11.81□□□□□ -0.52
ERVFC1-1P60608 AP000347.1-202ENST00000435868 847 ntBASIC11.81□□□□□ -0.52
ERVFC1-1P60608 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC11.81□□□□□ -0.52
ERVFC1-1P60608 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC11.81□□□□□ -0.52
ERVFC1-1P60608 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC11.81□□□□□ -0.52
ERVFC1-1P60608 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
ERVFC1-1P60608 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC11.81□□□□□ -0.52
ERVFC1-1P60608 RNF151-202ENST00000569210 853 ntTSL 2 BASIC11.81□□□□□ -0.52
ERVFC1-1P60608 MTDHP4-201ENST00000600287 670 ntBASIC11.81□□□□□ -0.52
ERVFC1-1P60608 PRKN-208ENST00000610470 531 ntTSL 2 BASIC11.81□□□□□ -0.52
ERVFC1-1P60608 PRKN-209ENST00000612485 225 ntTSL 5 BASIC11.81□□□□□ -0.52
ERVFC1-1P60608 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC11.81□□□□□ -0.52
ERVFC1-1P60608 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC11.81□□□□□ -0.52
ERVFC1-1P60608 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC11.81□□□□□ -0.52
ERVFC1-1P60608 AC117500.6-201ENST00000624871 588 ntBASIC11.81□□□□□ -0.52
ERVFC1-1P60608 ATG7-201ENST00000354449 4959 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
ERVFC1-1P60608 SIX4-201ENST00000216513 6285 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
ERVFC1-1P60608 AC073439.1-201ENST00000624121 1774 ntBASIC11.81□□□□□ -0.52
ERVFC1-1P60608 DPP10-201ENST00000310323 3052 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
ERVFC1-1P60608 CARHSP1-218ENST00000614449 2931 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
ERVFC1-1P60608 CDKN1A-208ENST00000615513 2102 ntAPPRIS P1 TSL 2 BASIC11.81□□□□□ -0.52
ERVFC1-1P60608 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
ERVFC1-1P60608 ELN-211ENST00000414324 3139 ntAPPRIS ALT2 TSL 2 BASIC11.81□□□□□ -0.52
ERVFC1-1P60608 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
ERVFC1-1P60608 C10orf88-204ENST00000481909 2482 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
ERVFC1-1P60608 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC11.81□□□□□ -0.52
ERVFC1-1P60608 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
ERVFC1-1P60608 LRRFIP2-202ENST00000354379 2821 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
ERVFC1-1P60608 TMEM123-201ENST00000361236 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
ERVFC1-1P60608 ATXN2L-215ENST00000564304 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
ERVFC1-1P60608 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC11.81□□□□□ -0.52
ERVFC1-1P60608 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
ERVFC1-1P60608 SNED1-201ENST00000310397 8174 ntAPPRIS P2 TSL 5 BASIC11.8□□□□□ -0.52
ERVFC1-1P60608 CLK4-201ENST00000316308 2568 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
ERVFC1-1P60608 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC11.8□□□□□ -0.52
ERVFC1-1P60608 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
ERVFC1-1P60608 MKL1-201ENST00000355630 4496 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
ERVFC1-1P60608 SSBP2-220ENST00000615665 4465 ntTSL 5 BASIC11.8□□□□□ -0.52
ERVFC1-1P60608 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
ERVFC1-1P60608 LINC01792-201ENST00000452787 2050 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
ERVFC1-1P60608 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC11.8□□□□□ -0.52
ERVFC1-1P60608 ACIN1-202ENST00000338631 2445 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
ERVFC1-1P60608 DNM3-202ENST00000367731 7613 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
ERVFC1-1P60608 RNF26-201ENST00000311413 2787 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
ERVFC1-1P60608 TRIB2-201ENST00000155926 4391 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
ERVFC1-1P60608 PROM2-201ENST00000317620 4728 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
ERVFC1-1P60608 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
ERVFC1-1P60608 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
ERVFC1-1P60608 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC11.8□□□□□ -0.52
ERVFC1-1P60608 ENO2-211ENST00000541477 2549 ntAPPRIS P1 TSL 2 BASIC11.8□□□□□ -0.52
ERVFC1-1P60608 UBE2D3-210ENST00000453744 3990 ntAPPRIS ALT1 TSL 1 (best) BASIC11.8□□□□□ -0.52
ERVFC1-1P60608 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC11.8□□□□□ -0.52
ERVFC1-1P60608 HMGA1P7-201ENST00000406908 502 ntBASIC11.8□□□□□ -0.52
ERVFC1-1P60608 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC11.8□□□□□ -0.52
ERVFC1-1P60608 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
ERVFC1-1P60608 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC11.8□□□□□ -0.52
ERVFC1-1P60608 FGFR3P6-201ENST00000457012 610 ntBASIC11.8□□□□□ -0.52
ERVFC1-1P60608 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
ERVFC1-1P60608 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC11.8□□□□□ -0.52
ERVFC1-1P60608 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC11.8□□□□□ -0.52
ERVFC1-1P60608 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
ERVFC1-1P60608 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC11.8□□□□□ -0.52
ERVFC1-1P60608 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC11.8□□□□□ -0.52
ERVFC1-1P60608 AC006557.2-201ENST00000592985 1240 ntBASIC11.8□□□□□ -0.52
ERVFC1-1P60608 AC011467.4-201ENST00000594891 528 ntBASIC11.8□□□□□ -0.52
ERVFC1-1P60608 AL450472.2-201ENST00000603663 1156 ntBASIC11.8□□□□□ -0.52
ERVFC1-1P60608 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC11.8□□□□□ -0.52
ERVFC1-1P60608 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC11.8□□□□□ -0.52
ERVFC1-1P60608 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC11.8□□□□□ -0.52
ERVFC1-1P60608 KCNIP1-208ENST00000520740 1845 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
ERVFC1-1P60608 FAM155B-201ENST00000252338 4013 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
ERVFC1-1P60608 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
ERVFC1-1P60608 SLC35C2-201ENST00000243896 2447 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
ERVFC1-1P60608 PPP1R15B-201ENST00000367188 5227 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Retrieved 100 of 98,524 protein–RNA pairs in 53 ms