Protein–RNA interactions for Protein: P55316

FOXG1, Forkhead box protein G1, humanhuman

Predicted RBP Predictions only

Length 489 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXG1P55316 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
FOXG1P55316 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
FOXG1P55316 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
FOXG1P55316 TMEM141-201ENST00000290079 768 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
FOXG1P55316 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
FOXG1P55316 MCFD2-204ENST00000409207 1113 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
FOXG1P55316 C9orf116-205ENST00000429260 678 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
FOXG1P55316 VGLL4-214ENST00000451674 938 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
FOXG1P55316 PRPS2-205ENST00000489404 763 ntTSL 2 BASIC13.18□□□□□ -0.3
FOXG1P55316 C1RL-212ENST00000545337 813 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
FOXG1P55316 AC023310.1-201ENST00000554836 735 ntBASIC13.18□□□□□ -0.3
FOXG1P55316 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC13.18□□□□□ -0.3
FOXG1P55316 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC13.18□□□□□ -0.3
FOXG1P55316 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
FOXG1P55316 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
FOXG1P55316 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC13.18□□□□□ -0.3
FOXG1P55316 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC13.18□□□□□ -0.3
FOXG1P55316 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
FOXG1P55316 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC13.18□□□□□ -0.3
FOXG1P55316 AC007686.3-201ENST00000619017 3487 ntBASIC13.18□□□□□ -0.3
FOXG1P55316 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
FOXG1P55316 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
FOXG1P55316 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
FOXG1P55316 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
FOXG1P55316 GSN-203ENST00000373808 2664 ntTSL 2 BASIC13.17□□□□□ -0.3
FOXG1P55316 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC13.17□□□□□ -0.3
FOXG1P55316 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
FOXG1P55316 GPI-205ENST00000586425 1799 ntTSL 5 BASIC13.17□□□□□ -0.3
FOXG1P55316 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
FOXG1P55316 AL138725.1-201ENST00000407347 1314 ntBASIC13.17□□□□□ -0.3
FOXG1P55316 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC13.17□□□□□ -0.3
FOXG1P55316 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC13.17□□□□□ -0.3
FOXG1P55316 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
FOXG1P55316 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC13.17□□□□□ -0.3
FOXG1P55316 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
FOXG1P55316 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC13.17□□□□□ -0.3
FOXG1P55316 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
FOXG1P55316 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
FOXG1P55316 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC13.17□□□□□ -0.3
FOXG1P55316 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
FOXG1P55316 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
FOXG1P55316 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
FOXG1P55316 AC099552.1-201ENST00000431083 744 ntTSL 5 BASIC13.17□□□□□ -0.3
FOXG1P55316 AC010745.3-201ENST00000439745 415 ntTSL 3 BASIC13.17□□□□□ -0.3
FOXG1P55316 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC13.17□□□□□ -0.3
FOXG1P55316 YBX1P6-201ENST00000442962 1002 ntBASIC13.17□□□□□ -0.3
FOXG1P55316 RPL13AP20-201ENST00000459725 609 ntBASIC13.17□□□□□ -0.3
FOXG1P55316 PRSS30P-204ENST00000489864 650 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
FOXG1P55316 RNA5SP412-201ENST00000516234 123 ntBASIC13.17□□□□□ -0.3
FOXG1P55316 ANAPC15-208ENST00000538393 867 ntAPPRIS P3 TSL 2 BASIC13.17□□□□□ -0.3
FOXG1P55316 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC13.17□□□□□ -0.3
FOXG1P55316 AL163974.1-201ENST00000554540 466 ntTSL 5 BASIC13.17□□□□□ -0.3
FOXG1P55316 AC105020.3-201ENST00000566036 560 ntTSL 4 BASIC13.17□□□□□ -0.3
FOXG1P55316 AP002360.2-202ENST00000572035 738 ntTSL 3 BASIC13.17□□□□□ -0.3
FOXG1P55316 PPY2P-201ENST00000582808 702 ntBASIC13.17□□□□□ -0.3
FOXG1P55316 PPY2P-202ENST00000583761 657 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
FOXG1P55316 AC010328.2-201ENST00000597698 1111 ntBASIC13.17□□□□□ -0.3
FOXG1P55316 COPS9-205ENST00000607357 418 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
FOXG1P55316 AC138696.2-201ENST00000607376 223 ntBASIC13.17□□□□□ -0.3
FOXG1P55316 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC13.17□□□□□ -0.3
FOXG1P55316 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
FOXG1P55316 COCH-203ENST00000460581 2688 ntTSL 2 BASIC13.17□□□□□ -0.3
FOXG1P55316 PKD1P5-201ENST00000532415 10291 ntBASIC13.17□□□□□ -0.3
FOXG1P55316 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
FOXG1P55316 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC13.17□□□□□ -0.3
FOXG1P55316 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC13.17□□□□□ -0.3
FOXG1P55316 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
FOXG1P55316 PGA5-201ENST00000312403 1519 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
FOXG1P55316 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
FOXG1P55316 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
FOXG1P55316 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
FOXG1P55316 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
FOXG1P55316 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC13.17□□□□□ -0.3
FOXG1P55316 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
FOXG1P55316 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC13.17□□□□□ -0.3
FOXG1P55316 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
FOXG1P55316 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
FOXG1P55316 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
FOXG1P55316 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
FOXG1P55316 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
FOXG1P55316 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
FOXG1P55316 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
FOXG1P55316 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
FOXG1P55316 AC013726.1-201ENST00000563747 2285 ntBASIC13.16□□□□□ -0.3
FOXG1P55316 AL596257.1-201ENST00000641463 2694 ntBASIC13.16□□□□□ -0.3
FOXG1P55316 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
FOXG1P55316 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
FOXG1P55316 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC13.16□□□□□ -0.3
FOXG1P55316 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
FOXG1P55316 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
FOXG1P55316 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
FOXG1P55316 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
FOXG1P55316 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC13.16□□□□□ -0.3
FOXG1P55316 KLK5-202ENST00000391809 1405 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
FOXG1P55316 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
FOXG1P55316 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC13.16□□□□□ -0.3
FOXG1P55316 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC13.16□□□□□ -0.3
FOXG1P55316 AC006058.4-201ENST00000624016 1670 ntBASIC13.16□□□□□ -0.3
FOXG1P55316 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
FOXG1P55316 ANGPTL8-201ENST00000252453 872 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms