Protein–RNA interactions for Protein: P55212

CASP6, Caspase-6, humanhuman

Predictions only

Length 293 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASP6P55212 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
CASP6P55212 YTHDF3-216ENST00000623280 5193 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
CASP6P55212 EHD4-201ENST00000220325 6416 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CASP6P55212 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CASP6P55212 MAP3K11-208ENST00000530153 2830 ntTSL 2 BASIC13.62□□□□□ -0.23
CASP6P55212 CABP4-201ENST00000325656 2559 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CASP6P55212 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC13.62□□□□□ -0.23
CASP6P55212 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CASP6P55212 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC13.62□□□□□ -0.23
CASP6P55212 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
CASP6P55212 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CASP6P55212 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CASP6P55212 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CASP6P55212 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CASP6P55212 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CASP6P55212 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC13.61□□□□□ -0.23
CASP6P55212 AC015802.6-201ENST00000640006 5654 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
CASP6P55212 SLC4A7-210ENST00000440156 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
CASP6P55212 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC13.61□□□□□ -0.23
CASP6P55212 KCNMA1-262ENST00000639489 4302 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
CASP6P55212 TRAF1-201ENST00000373887 6324 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CASP6P55212 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
CASP6P55212 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CASP6P55212 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC13.61□□□□□ -0.23
CASP6P55212 KNCN-202ENST00000396314 608 ntAPPRIS P3 TSL 4 BASIC13.61□□□□□ -0.23
CASP6P55212 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC13.61□□□□□ -0.23
CASP6P55212 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
CASP6P55212 AC011742.3-201ENST00000439053 820 ntBASIC13.61□□□□□ -0.23
CASP6P55212 USE1-202ENST00000445667 795 ntAPPRIS ALT1 TSL 5 BASIC13.61□□□□□ -0.23
CASP6P55212 MAGEA5-201ENST00000446757 942 ntBASIC13.61□□□□□ -0.23
CASP6P55212 REEP1-202ENST00000453231 940 ntTSL 2 BASIC13.61□□□□□ -0.23
CASP6P55212 SERPINA13P-202ENST00000478994 924 ntBASIC13.61□□□□□ -0.23
CASP6P55212 AC078852.2-201ENST00000504748 527 ntTSL 5 BASIC13.61□□□□□ -0.23
CASP6P55212 AGTRAP-212ENST00000510878 849 ntTSL 3 BASIC13.61□□□□□ -0.23
CASP6P55212 AC025810.1-201ENST00000569986 981 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CASP6P55212 TUBB4A-212ENST00000601152 590 ntTSL 4 BASIC13.61□□□□□ -0.23
CASP6P55212 AL353726.2-201ENST00000623259 884 ntBASIC13.61□□□□□ -0.23
CASP6P55212 AC138627.1-207ENST00000641560 1006 ntBASIC13.61□□□□□ -0.23
CASP6P55212 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC13.61□□□□□ -0.23
CASP6P55212 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CASP6P55212 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
CASP6P55212 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC13.61□□□□□ -0.23
CASP6P55212 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CASP6P55212 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CASP6P55212 LINC00910-206ENST00000592135 2438 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CASP6P55212 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
CASP6P55212 MIR193BHG-211ENST00000641433 5365 ntBASIC13.61□□□□□ -0.23
CASP6P55212 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CASP6P55212 SLC40A1-201ENST00000261024 3442 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CASP6P55212 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC13.61□□□□□ -0.23
CASP6P55212 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CASP6P55212 TMEM38A-201ENST00000187762 2649 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CASP6P55212 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC13.6□□□□□ -0.23
CASP6P55212 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
CASP6P55212 MYO16-203ENST00000357550 6779 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
CASP6P55212 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
CASP6P55212 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC13.6□□□□□ -0.23
CASP6P55212 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC13.6□□□□□ -0.23
CASP6P55212 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
CASP6P55212 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC13.6□□□□□ -0.23
CASP6P55212 CRTC1-202ENST00000338797 6929 ntAPPRIS ALT1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CASP6P55212 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC13.6□□□□□ -0.23
CASP6P55212 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
CASP6P55212 AL596087.1-201ENST00000400979 1969 ntBASIC13.6□□□□□ -0.23
CASP6P55212 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC13.6□□□□□ -0.23
CASP6P55212 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
CASP6P55212 LINC00887-202ENST00000414120 2880 ntTSL 3 BASIC13.6□□□□□ -0.23
CASP6P55212 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
CASP6P55212 MALSU1-202ENST00000466681 3044 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CASP6P55212 C15orf59-204ENST00000569673 6573 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
CASP6P55212 BCAN-201ENST00000329117 3466 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CASP6P55212 RDH5-201ENST00000257895 1269 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CASP6P55212 CCDC88A-201ENST00000263630 9667 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
CASP6P55212 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CASP6P55212 PCM1-201ENST00000325083 6820 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CASP6P55212 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
CASP6P55212 TPM2-202ENST00000360958 1189 ntAPPRIS P5 TSL 1 (best) BASIC13.6□□□□□ -0.23
CASP6P55212 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC13.6□□□□□ -0.23
CASP6P55212 KRTAP19-9P-201ENST00000421795 191 ntBASIC13.6□□□□□ -0.23
CASP6P55212 ZSCAN32-204ENST00000422427 1267 ntTSL 2 BASIC13.6□□□□□ -0.23
CASP6P55212 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC13.6□□□□□ -0.23
CASP6P55212 RBM26-203ENST00000438737 4132 ntTSL 5 BASIC13.6□□□□□ -0.23
CASP6P55212 RN7SL769P-201ENST00000469386 295 ntBASIC13.6□□□□□ -0.23
CASP6P55212 PRSS30P-202ENST00000475030 752 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
CASP6P55212 RAMP3-202ENST00000481345 559 ntAPPRIS P2 TSL 4 BASIC13.6□□□□□ -0.23
CASP6P55212 HIST2H2BC-201ENST00000498492 580 ntBASIC13.6□□□□□ -0.23
CASP6P55212 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC13.6□□□□□ -0.23
CASP6P55212 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC13.6□□□□□ -0.23
CASP6P55212 RDH5-204ENST00000548082 1259 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CASP6P55212 UMODL1-204ENST00000400427 5442 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
CASP6P55212 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CASP6P55212 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CASP6P55212 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
CASP6P55212 KRT8P4-201ENST00000509735 1454 ntBASIC13.6□□□□□ -0.23
CASP6P55212 TNRC18P2-201ENST00000417666 2714 ntBASIC13.6□□□□□ -0.23
CASP6P55212 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CASP6P55212 RREB1-202ENST00000349384 7440 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
CASP6P55212 JARID2-202ENST00000397311 5595 ntAPPRIS ALT2 TSL 2 BASIC13.6□□□□□ -0.23
CASP6P55212 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CASP6P55212 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC13.6□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms