Protein–RNA interactions for Protein: P55196

AFDN, Afadin, humanhuman

Known RBP Predictions only

Length 1,824 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AFDNP55196 CRYBB1-201ENST00000215939 1102 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
AFDNP55196 RASSF3-202ENST00000336061 1030 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
AFDNP55196 AL627231.1-201ENST00000394467 1125 ntBASIC18.6■□□□□ 0.57
AFDNP55196 AC093484.1-201ENST00000441875 477 ntTSL 5 BASIC18.6■□□□□ 0.57
AFDNP55196 AC010973.2-201ENST00000485974 1230 ntTSL 2 BASIC18.6■□□□□ 0.57
AFDNP55196 PPFIBP1-204ENST00000535047 875 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
AFDNP55196 TMEM231-206ENST00000565067 1078 ntTSL 5 BASIC18.6■□□□□ 0.57
AFDNP55196 FOS-201ENST00000303562 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
AFDNP55196 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
AFDNP55196 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
AFDNP55196 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC18.6■□□□□ 0.57
AFDNP55196 C1QTNF9-201ENST00000332018 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
AFDNP55196 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
AFDNP55196 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
AFDNP55196 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
AFDNP55196 TCAF2P1-201ENST00000291129 2421 ntBASIC18.59■□□□□ 0.57
AFDNP55196 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
AFDNP55196 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
AFDNP55196 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC18.59■□□□□ 0.57
AFDNP55196 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
AFDNP55196 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
AFDNP55196 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
AFDNP55196 NCR3-202ENST00000376071 541 ntTSL 5 BASIC18.59■□□□□ 0.57
AFDNP55196 LINC00431-201ENST00000440735 1189 ntTSL 5 BASIC18.59■□□□□ 0.57
AFDNP55196 CICP12-201ENST00000455801 843 ntBASIC18.59■□□□□ 0.57
AFDNP55196 LTBR-209ENST00000541102 1084 ntTSL 5 BASIC18.59■□□□□ 0.57
AFDNP55196 FANCA-205ENST00000543736 1000 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
AFDNP55196 NPTN-204ENST00000562924 1094 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
AFDNP55196 PHBP15-201ENST00000574228 665 ntBASIC18.59■□□□□ 0.57
AFDNP55196 C15orf59-AS1-202ENST00000615095 1224 ntTSL 5 BASIC18.59■□□□□ 0.57
AFDNP55196 AC073911.3-201ENST00000624401 631 ntBASIC18.59■□□□□ 0.57
AFDNP55196 DDX5-235ENST00000630471 473 ntTSL 4 BASIC18.59■□□□□ 0.57
AFDNP55196 CCDC197-205ENST00000636493 1279 ntAPPRIS P5 TSL 5 BASIC18.59■□□□□ 0.57
AFDNP55196 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC18.59■□□□□ 0.57
AFDNP55196 SH3GLB2-205ENST00000416629 1415 ntTSL 5 BASIC18.59■□□□□ 0.57
AFDNP55196 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
AFDNP55196 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC18.59■□□□□ 0.57
AFDNP55196 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
AFDNP55196 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
AFDNP55196 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
AFDNP55196 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
AFDNP55196 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
AFDNP55196 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
AFDNP55196 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
AFDNP55196 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
AFDNP55196 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
AFDNP55196 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
AFDNP55196 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
AFDNP55196 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC18.59■□□□□ 0.57
AFDNP55196 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC18.59■□□□□ 0.57
AFDNP55196 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
AFDNP55196 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC18.58■□□□□ 0.57
AFDNP55196 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
AFDNP55196 CYP51A1P3-201ENST00000400072 1428 ntBASIC18.58■□□□□ 0.57
AFDNP55196 CIDEC-202ENST00000383817 1199 ntAPPRIS ALT1 TSL 1 (best) BASIC18.58■□□□□ 0.57
AFDNP55196 Z99943.1-201ENST00000451545 718 ntTSL 3 BASIC18.58■□□□□ 0.57
AFDNP55196 AC079112.1-201ENST00000454972 939 ntBASIC18.58■□□□□ 0.57
AFDNP55196 ANO1-AS2-202ENST00000533327 498 ntTSL 3 BASIC18.58■□□□□ 0.57
AFDNP55196 RPL19-207ENST00000582193 792 ntAPPRIS ALT1 TSL 5 BASIC18.58■□□□□ 0.57
AFDNP55196 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
AFDNP55196 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
AFDNP55196 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
AFDNP55196 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC18.58■□□□□ 0.57
AFDNP55196 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
AFDNP55196 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
AFDNP55196 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC18.58■□□□□ 0.56
AFDNP55196 AC011270.2-201ENST00000624293 2550 ntBASIC18.58■□□□□ 0.56
AFDNP55196 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
AFDNP55196 LYRM1-203ENST00000412082 1399 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
AFDNP55196 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC18.58■□□□□ 0.56
AFDNP55196 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
AFDNP55196 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC18.58■□□□□ 0.56
AFDNP55196 FH-201ENST00000366560 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
AFDNP55196 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
AFDNP55196 FAM151A-202ENST00000371304 1444 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
AFDNP55196 CSRP1-201ENST00000340006 1952 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
AFDNP55196 SNRPN-203ENST00000400097 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
AFDNP55196 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC18.58■□□□□ 0.56
AFDNP55196 CMTM5-201ENST00000339180 1173 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
AFDNP55196 COX8C-201ENST00000342144 533 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
AFDNP55196 CMTM5-202ENST00000342473 725 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
AFDNP55196 AC239868.1-201ENST00000369385 493 ntBASIC18.58■□□□□ 0.56
AFDNP55196 TAF8-202ENST00000372978 794 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
AFDNP55196 AL583805.1-201ENST00000391389 531 ntBASIC18.58■□□□□ 0.56
AFDNP55196 CMTM5-205ENST00000397227 818 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
AFDNP55196 MIR4435-2HG-204ENST00000419736 777 ntTSL 3 BASIC18.58■□□□□ 0.56
AFDNP55196 PTPA-215ENST00000432124 567 ntTSL 4 BASIC18.58■□□□□ 0.56
AFDNP55196 OR2R1P-201ENST00000441404 914 ntBASIC18.58■□□□□ 0.56
AFDNP55196 AC012441.2-201ENST00000444843 739 ntBASIC18.58■□□□□ 0.56
AFDNP55196 MRPL22P1-201ENST00000505398 616 ntBASIC18.58■□□□□ 0.56
AFDNP55196 CMTM5-208ENST00000555731 831 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
AFDNP55196 C14orf132-204ENST00000556728 774 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
AFDNP55196 TPM1-223ENST00000560445 485 ntTSL 3 BASIC18.58■□□□□ 0.56
AFDNP55196 MT1H-202ENST00000569155 697 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
AFDNP55196 HIST2H2BB-202ENST00000609585 563 ntTSL 2 BASIC18.58■□□□□ 0.56
AFDNP55196 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC18.58■□□□□ 0.56
AFDNP55196 AC092135.3-201ENST00000624151 1846 ntBASIC18.58■□□□□ 0.56
AFDNP55196 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC18.58■□□□□ 0.56
AFDNP55196 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
AFDNP55196 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC18.57■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms