Protein–RNA interactions for Protein: P54868

HMGCS2, Hydroxymethylglutaryl-CoA synthase, mitochondrial, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2P54868 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
HMGCS2P54868 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
HMGCS2P54868 WAC-202ENST00000347934 2839 ntTSL 5 BASIC17.21■□□□□ 0.35
HMGCS2P54868 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
HMGCS2P54868 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC17.21■□□□□ 0.35
HMGCS2P54868 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
HMGCS2P54868 ZCCHC17-204ENST00000546109 1705 ntTSL 2 BASIC17.21■□□□□ 0.35
HMGCS2P54868 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC17.21■□□□□ 0.35
HMGCS2P54868 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
HMGCS2P54868 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
HMGCS2P54868 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
HMGCS2P54868 PRG2-201ENST00000311862 1424 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.34
HMGCS2P54868 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC17.21■□□□□ 0.34
HMGCS2P54868 FOS-201ENST00000303562 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
HMGCS2P54868 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC17.2■□□□□ 0.34
HMGCS2P54868 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
HMGCS2P54868 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
HMGCS2P54868 AL024498.2-201ENST00000480294 1589 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
HMGCS2P54868 CYP4F23P-201ENST00000593402 1579 ntBASIC17.2■□□□□ 0.34
HMGCS2P54868 ERGIC3-203ENST00000357394 1357 ntAPPRIS P4 TSL 2 BASIC17.2■□□□□ 0.34
HMGCS2P54868 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC17.2■□□□□ 0.34
HMGCS2P54868 ZBED1P1-201ENST00000502364 1930 ntBASIC17.2■□□□□ 0.34
HMGCS2P54868 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
HMGCS2P54868 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
HMGCS2P54868 IER3-201ENST00000259874 1244 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
HMGCS2P54868 CRB3-201ENST00000308243 631 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
HMGCS2P54868 UBE4B-203ENST00000377153 1273 ntTSL 3 BASIC17.2■□□□□ 0.34
HMGCS2P54868 AL627231.1-201ENST00000394467 1125 ntBASIC17.2■□□□□ 0.34
HMGCS2P54868 THAP4-202ENST00000402136 785 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
HMGCS2P54868 AC098935.1-201ENST00000446057 611 ntBASIC17.2■□□□□ 0.34
HMGCS2P54868 UPK1B-205ENST00000497685 981 ntTSL 2 BASIC17.2■□□□□ 0.34
HMGCS2P54868 AC105389.3-201ENST00000508038 907 ntTSL 5 BASIC17.2■□□□□ 0.34
HMGCS2P54868 IFITM1-204ENST00000528780 730 ntAPPRIS P1 TSL 3 BASIC17.2■□□□□ 0.34
HMGCS2P54868 SMIM22-209ENST00000591870 355 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
HMGCS2P54868 AL109837.1-201ENST00000603272 613 ntBASIC17.2■□□□□ 0.34
HMGCS2P54868 MEG3_2.1-201ENST00000611456 105 ntBASIC17.2■□□□□ 0.34
HMGCS2P54868 AL805961.1-201ENST00000642026 753 ntBASIC17.2■□□□□ 0.34
HMGCS2P54868 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
HMGCS2P54868 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
HMGCS2P54868 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
HMGCS2P54868 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
HMGCS2P54868 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
HMGCS2P54868 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
HMGCS2P54868 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
HMGCS2P54868 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC17.2■□□□□ 0.34
HMGCS2P54868 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
HMGCS2P54868 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
HMGCS2P54868 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC17.19■□□□□ 0.34
HMGCS2P54868 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC17.19■□□□□ 0.34
HMGCS2P54868 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
HMGCS2P54868 AC007292.2-201ENST00000593524 1812 ntBASIC17.19■□□□□ 0.34
HMGCS2P54868 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
HMGCS2P54868 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
HMGCS2P54868 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
HMGCS2P54868 AC136621.1-201ENST00000624017 2304 ntBASIC17.19■□□□□ 0.34
HMGCS2P54868 OR6A2-201ENST00000332601 1373 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
HMGCS2P54868 CAP2P1-201ENST00000557743 1390 ntBASIC17.19■□□□□ 0.34
HMGCS2P54868 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC17.19■□□□□ 0.34
HMGCS2P54868 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
HMGCS2P54868 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
HMGCS2P54868 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
HMGCS2P54868 HIST1H1B-201ENST00000331442 681 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
HMGCS2P54868 AL021707.5-201ENST00000420118 461 ntTSL 5 BASIC17.19■□□□□ 0.34
HMGCS2P54868 BX284668.5-201ENST00000422124 406 ntTSL 2 BASIC17.19■□□□□ 0.34
HMGCS2P54868 AP000696.1-201ENST00000457669 1133 ntTSL 3 BASIC17.19■□□□□ 0.34
HMGCS2P54868 RN7SL67P-201ENST00000492147 296 ntBASIC17.19■□□□□ 0.34
HMGCS2P54868 AC084346.1-201ENST00000520962 528 ntTSL 4 BASIC17.19■□□□□ 0.34
HMGCS2P54868 AC131206.1-201ENST00000538078 1211 ntBASIC17.19■□□□□ 0.34
HMGCS2P54868 AC133919.1-201ENST00000562203 416 ntTSL 3 BASIC17.19■□□□□ 0.34
HMGCS2P54868 STUB1-204ENST00000564370 875 ntTSL 2 BASIC17.19■□□□□ 0.34
HMGCS2P54868 AC026803.1-201ENST00000569130 274 ntBASIC17.19■□□□□ 0.34
HMGCS2P54868 HS3ST3A1-202ENST00000578576 750 ntTSL 3 BASIC17.19■□□□□ 0.34
HMGCS2P54868 AC079336.4-201ENST00000584219 408 ntTSL 2 BASIC17.19■□□□□ 0.34
HMGCS2P54868 NFIC-204ENST00000586919 1221 ntTSL 5 BASIC17.19■□□□□ 0.34
HMGCS2P54868 SNRPD2-206ENST00000588301 702 ntAPPRIS P1 TSL 3 BASIC17.19■□□□□ 0.34
HMGCS2P54868 COX6A1P2-201ENST00000620597 330 ntBASIC17.19■□□□□ 0.34
HMGCS2P54868 AC011491.1-203ENST00000637688 543 ntBASIC17.19■□□□□ 0.34
HMGCS2P54868 ASGR1-201ENST00000269299 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
HMGCS2P54868 METTL17-221ENST00000556670 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
HMGCS2P54868 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
HMGCS2P54868 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
HMGCS2P54868 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
HMGCS2P54868 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
HMGCS2P54868 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
HMGCS2P54868 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
HMGCS2P54868 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC17.19■□□□□ 0.34
HMGCS2P54868 GOSR2-203ENST00000415811 2171 ntTSL 5 BASIC17.19■□□□□ 0.34
HMGCS2P54868 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
HMGCS2P54868 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
HMGCS2P54868 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
HMGCS2P54868 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
HMGCS2P54868 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
HMGCS2P54868 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
HMGCS2P54868 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC17.18■□□□□ 0.34
HMGCS2P54868 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC17.18■□□□□ 0.34
HMGCS2P54868 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC17.18■□□□□ 0.34
HMGCS2P54868 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC17.18■□□□□ 0.34
HMGCS2P54868 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
HMGCS2P54868 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
HMGCS2P54868 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 40 ms