Protein–RNA interactions for Protein: P52926

HMGA2, High mobility group protein HMGI-C, humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2P52926 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC13.73□□□□□ -0.21
HMGA2P52926 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC13.73□□□□□ -0.21
HMGA2P52926 BCAT2-203ENST00000545387 1272 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
HMGA2P52926 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC13.73□□□□□ -0.21
HMGA2P52926 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC13.73□□□□□ -0.21
HMGA2P52926 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
HMGA2P52926 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC13.73□□□□□ -0.21
HMGA2P52926 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC13.73□□□□□ -0.21
HMGA2P52926 STRADA-221ENST00000582137 1238 ntTSL 2 BASIC13.73□□□□□ -0.21
HMGA2P52926 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC13.73□□□□□ -0.21
HMGA2P52926 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
HMGA2P52926 AL590560.3-201ENST00000623350 461 ntBASIC13.73□□□□□ -0.21
HMGA2P52926 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
HMGA2P52926 ELAC2-201ENST00000338034 3148 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
HMGA2P52926 CEP295NL-205ENST00000619342 1866 ntTSL 5 BASIC13.73□□□□□ -0.21
HMGA2P52926 AC130686.1-201ENST00000622936 2466 ntBASIC13.73□□□□□ -0.21
HMGA2P52926 AC215219.1-201ENST00000400706 1817 ntBASIC13.73□□□□□ -0.21
HMGA2P52926 DHRS4-AS1-204ENST00000555045 1848 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
HMGA2P52926 MBD1-201ENST00000269468 3259 ntAPPRIS P3 TSL 5 BASIC13.73□□□□□ -0.21
HMGA2P52926 WNT9B-202ENST00000393461 2654 ntTSL 2 BASIC13.73□□□□□ -0.21
HMGA2P52926 CCNG1-202ENST00000393929 2366 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
HMGA2P52926 PHYHIP-202ENST00000454243 3200 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
HMGA2P52926 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
HMGA2P52926 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
HMGA2P52926 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
HMGA2P52926 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
HMGA2P52926 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
HMGA2P52926 FAM160A2-202ENST00000449352 3354 ntAPPRIS ALT1 TSL 1 (best) BASIC13.72□□□□□ -0.21
HMGA2P52926 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
HMGA2P52926 CNTNAP3P2-201ENST00000617175 3861 ntBASIC13.72□□□□□ -0.21
HMGA2P52926 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
HMGA2P52926 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
HMGA2P52926 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
HMGA2P52926 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
HMGA2P52926 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
HMGA2P52926 NFE2L2-202ENST00000397063 2651 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
HMGA2P52926 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
HMGA2P52926 APP-205ENST00000358918 2366 ntTSL 5 BASIC13.72□□□□□ -0.21
HMGA2P52926 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
HMGA2P52926 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC13.72□□□□□ -0.21
HMGA2P52926 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
HMGA2P52926 AL355390.1-201ENST00000325811 2328 ntTSL 2 BASIC13.72□□□□□ -0.21
HMGA2P52926 PAPSS2-202ENST00000456849 3856 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
HMGA2P52926 GNAO1-201ENST00000262493 3337 ntAPPRIS P5 TSL 1 (best) BASIC13.72□□□□□ -0.21
HMGA2P52926 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC13.72□□□□□ -0.21
HMGA2P52926 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC13.72□□□□□ -0.21
HMGA2P52926 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC13.72□□□□□ -0.21
HMGA2P52926 AC009477.1-201ENST00000452936 217 ntBASIC13.72□□□□□ -0.21
HMGA2P52926 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC13.72□□□□□ -0.21
HMGA2P52926 FAM86LP-201ENST00000478302 853 ntBASIC13.72□□□□□ -0.21
HMGA2P52926 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC13.72□□□□□ -0.21
HMGA2P52926 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
HMGA2P52926 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
HMGA2P52926 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC13.72□□□□□ -0.21
HMGA2P52926 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC13.72□□□□□ -0.21
HMGA2P52926 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
HMGA2P52926 RARRES2P5-201ENST00000564013 466 ntBASIC13.72□□□□□ -0.21
HMGA2P52926 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC13.72□□□□□ -0.21
HMGA2P52926 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
HMGA2P52926 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC13.72□□□□□ -0.21
HMGA2P52926 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
HMGA2P52926 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC13.72□□□□□ -0.21
HMGA2P52926 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC13.72□□□□□ -0.21
HMGA2P52926 Z92544.3-201ENST00000624747 417 ntBASIC13.72□□□□□ -0.21
HMGA2P52926 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC13.72□□□□□ -0.21
HMGA2P52926 HIF3A-202ENST00000244303 2250 ntTSL 2 BASIC13.72□□□□□ -0.21
HMGA2P52926 GAS2L2-202ENST00000604641 3014 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
HMGA2P52926 SYNRG-225ENST00000619541 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
HMGA2P52926 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC13.72□□□□□ -0.21
HMGA2P52926 DPYSL4-201ENST00000338492 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
HMGA2P52926 UBA1-202ENST00000377269 2497 ntTSL 2 BASIC13.72□□□□□ -0.21
HMGA2P52926 GNPNAT1-203ENST00000554230 2238 ntTSL 5 BASIC13.72□□□□□ -0.21
HMGA2P52926 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
HMGA2P52926 AL590132.1-202ENST00000638983 4184 ntTSL 5 BASIC13.72□□□□□ -0.21
HMGA2P52926 AC009133.1-201ENST00000569981 2449 ntTSL 2 BASIC13.72□□□□□ -0.21
HMGA2P52926 CYP4B1-201ENST00000271153 2171 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
HMGA2P52926 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
HMGA2P52926 MFAP4-202ENST00000395592 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
HMGA2P52926 STRADA-243ENST00000640086 1925 ntTSL 5 BASIC13.72□□□□□ -0.21
HMGA2P52926 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC13.72□□□□□ -0.21
HMGA2P52926 LILRB5-203ENST00000449561 2137 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
HMGA2P52926 GOPC-203ENST00000535237 4460 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
HMGA2P52926 CICP16-201ENST00000502609 2813 ntBASIC13.72□□□□□ -0.21
HMGA2P52926 POLR1E-202ENST00000377798 1868 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
HMGA2P52926 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
HMGA2P52926 ALDH3B1-201ENST00000342456 2786 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
HMGA2P52926 NPRL3-212ENST00000620134 3203 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
HMGA2P52926 LANCL2-201ENST00000254770 4353 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
HMGA2P52926 GSN-209ENST00000449733 2702 ntTSL 2 BASIC13.71□□□□□ -0.21
HMGA2P52926 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC13.71□□□□□ -0.21
HMGA2P52926 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC13.71□□□□□ -0.21
HMGA2P52926 SLFNL1-204ENST00000372613 2654 ntTSL 2 BASIC13.71□□□□□ -0.21
HMGA2P52926 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
HMGA2P52926 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
HMGA2P52926 CD48-201ENST00000368045 1793 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
HMGA2P52926 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC13.71□□□□□ -0.21
HMGA2P52926 CYP1B1-AS1-201ENST00000413828 1781 ntTSL 5 BASIC13.71□□□□□ -0.21
HMGA2P52926 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC13.71□□□□□ -0.21
HMGA2P52926 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
HMGA2P52926 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC13.71□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms