Protein–RNA interactions for Protein: P35527

KRT9, Keratin, type I cytoskeletal 9, humanhuman

Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT9P35527 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
KRT9P35527 FAM107A-206ENST00000474531 2271 ntTSL 2 BASIC16.55■□□□□ 0.24
KRT9P35527 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
KRT9P35527 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC16.55■□□□□ 0.24
KRT9P35527 SFMBT1-201ENST00000394752 4548 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
KRT9P35527 AC108134.1-201ENST00000382225 3061 ntTSL 2 BASIC16.55■□□□□ 0.24
KRT9P35527 PES1-204ENST00000402284 2144 ntTSL 5 BASIC16.55■□□□□ 0.24
KRT9P35527 ERC1-219ENST00000546231 4390 ntTSL 5 BASIC16.55■□□□□ 0.24
KRT9P35527 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
KRT9P35527 RET-201ENST00000340058 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
KRT9P35527 TMPRSS2-202ENST00000398585 3240 ntTSL 2 BASIC16.55■□□□□ 0.24
KRT9P35527 IRGQ-201ENST00000422989 9685 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
KRT9P35527 AFAP1L1-205ENST00000515000 2319 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
KRT9P35527 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC16.54■□□□□ 0.24
KRT9P35527 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
KRT9P35527 ZNF133-203ENST00000377671 2701 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
KRT9P35527 PDE8A-203ENST00000394553 3912 ntAPPRIS P4 TSL 1 (best) BASIC16.54■□□□□ 0.24
KRT9P35527 POU6F1-208ENST00000550824 2664 ntTSL 5 BASIC16.54■□□□□ 0.24
KRT9P35527 UHRF1-204ENST00000616255 2661 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
KRT9P35527 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
KRT9P35527 SEPT6-204ENST00000360156 2609 ntAPPRIS ALT1 TSL 1 (best) BASIC16.54■□□□□ 0.24
KRT9P35527 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
KRT9P35527 TRMT1-217ENST00000592062 2579 ntAPPRIS P3 TSL 5 BASIC16.54■□□□□ 0.24
KRT9P35527 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
KRT9P35527 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
KRT9P35527 SCN3B-201ENST00000299333 5665 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
KRT9P35527 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
KRT9P35527 HNRNPA1P40-201ENST00000426371 1278 ntBASIC16.54■□□□□ 0.24
KRT9P35527 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC16.54■□□□□ 0.24
KRT9P35527 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC16.54■□□□□ 0.24
KRT9P35527 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC16.54■□□□□ 0.24
KRT9P35527 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC16.54■□□□□ 0.24
KRT9P35527 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
KRT9P35527 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC16.54■□□□□ 0.24
KRT9P35527 RNA5SP421-201ENST00000516864 134 ntBASIC16.54■□□□□ 0.24
KRT9P35527 SRD5A3P1-201ENST00000603021 949 ntBASIC16.54■□□□□ 0.24
KRT9P35527 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC16.54■□□□□ 0.24
KRT9P35527 AC004840.1-201ENST00000636359 365 ntBASIC16.54■□□□□ 0.24
KRT9P35527 STK17B-201ENST00000263955 5287 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
KRT9P35527 BLOC1S6-212ENST00000566753 1996 ntTSL 2 BASIC16.54■□□□□ 0.24
KRT9P35527 AL157414.3-201ENST00000624276 1954 ntBASIC16.54■□□□□ 0.24
KRT9P35527 SLC4A7-210ENST00000440156 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
KRT9P35527 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC16.54■□□□□ 0.24
KRT9P35527 SLC25A21-AS1-201ENST00000556667 1924 ntBASIC16.54■□□□□ 0.24
KRT9P35527 SDR42E2-201ENST00000602312 2630 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
KRT9P35527 TTC7A-202ENST00000394850 4306 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
KRT9P35527 NCKIPSD-204ENST00000416649 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
KRT9P35527 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
KRT9P35527 FRMD3-201ENST00000304195 5297 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
KRT9P35527 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
KRT9P35527 USP36-201ENST00000312010 5234 ntAPPRIS P2 TSL 5 BASIC16.54■□□□□ 0.24
KRT9P35527 RIC1-201ENST00000251879 4127 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
KRT9P35527 ABCG1-203ENST00000361802 3034 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
KRT9P35527 RUNX1T1-251ENST00000615601 7372 ntAPPRIS ALT1 TSL 5 BASIC16.53■□□□□ 0.24
KRT9P35527 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC16.53■□□□□ 0.24
KRT9P35527 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC16.53■□□□□ 0.24
KRT9P35527 AP000550.1-201ENST00000420508 4833 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
KRT9P35527 KIF1C-201ENST00000320785 7919 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
KRT9P35527 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
KRT9P35527 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
KRT9P35527 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
KRT9P35527 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
KRT9P35527 KIF7-201ENST00000394412 4551 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
KRT9P35527 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC16.53■□□□□ 0.24
KRT9P35527 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
KRT9P35527 MYH11-201ENST00000300036 6029 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
KRT9P35527 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
KRT9P35527 PDPR-202ENST00000398122 2734 ntTSL 2 BASIC16.53■□□□□ 0.24
KRT9P35527 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
KRT9P35527 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
KRT9P35527 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
KRT9P35527 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC16.53■□□□□ 0.24
KRT9P35527 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC16.53■□□□□ 0.24
KRT9P35527 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC16.53■□□□□ 0.24
KRT9P35527 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC16.53■□□□□ 0.24
KRT9P35527 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
KRT9P35527 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC16.53■□□□□ 0.24
KRT9P35527 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC16.53■□□□□ 0.24
KRT9P35527 AC000095.1-201ENST00000603208 874 ntBASIC16.53■□□□□ 0.24
KRT9P35527 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC16.53■□□□□ 0.24
KRT9P35527 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC16.53■□□□□ 0.24
KRT9P35527 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
KRT9P35527 SMOC2-201ENST00000354536 3150 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
KRT9P35527 DMTN-201ENST00000265800 2554 ntTSL 5 BASIC16.53■□□□□ 0.24
KRT9P35527 RSPH9-202ENST00000372165 2586 ntTSL 2 BASIC16.53■□□□□ 0.24
KRT9P35527 DMTN-207ENST00000517305 2551 ntTSL 5 BASIC16.53■□□□□ 0.24
KRT9P35527 TDRD12-202ENST00000444215 3934 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
KRT9P35527 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
KRT9P35527 CD93-201ENST00000246006 6708 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
KRT9P35527 LHFPL4-201ENST00000287585 4880 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
KRT9P35527 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
KRT9P35527 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
KRT9P35527 MAGI1-201ENST00000330909 7415 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
KRT9P35527 SPECC1-202ENST00000395522 2982 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
KRT9P35527 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC16.53■□□□□ 0.24
KRT9P35527 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC16.53■□□□□ 0.24
KRT9P35527 SPATS2L-209ENST00000409988 2698 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
KRT9P35527 PKIA-202ENST00000396418 4163 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
KRT9P35527 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC16.52■□□□□ 0.24
KRT9P35527 CLEC16A-202ENST00000409552 3365 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 84.9 ms