Protein–RNA interactions for Protein: P29350

PTPN6, Tyrosine-protein phosphatase non-receptor type 6, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6P29350 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
PTPN6P29350 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
PTPN6P29350 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC14.32□□□□□ -0.12
PTPN6P29350 AC055811.4-201ENST00000624039 1754 ntBASIC14.32□□□□□ -0.12
PTPN6P29350 ARHGAP6-204ENST00000380718 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
PTPN6P29350 CDYL-205ENST00000449732 2139 ntTSL 2 BASIC14.32□□□□□ -0.12
PTPN6P29350 LRRC20-204ENST00000373224 3095 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
PTPN6P29350 KDM2B-205ENST00000536437 2762 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
PTPN6P29350 APCDD1L-201ENST00000371149 3426 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
PTPN6P29350 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
PTPN6P29350 PNPLA3-201ENST00000216180 2805 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
PTPN6P29350 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC14.32□□□□□ -0.12
PTPN6P29350 MBD1-212ENST00000585672 2532 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
PTPN6P29350 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC14.32□□□□□ -0.12
PTPN6P29350 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
PTPN6P29350 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC14.32□□□□□ -0.12
PTPN6P29350 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC14.32□□□□□ -0.12
PTPN6P29350 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
PTPN6P29350 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC14.32□□□□□ -0.12
PTPN6P29350 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC14.32□□□□□ -0.12
PTPN6P29350 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
PTPN6P29350 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC14.32□□□□□ -0.12
PTPN6P29350 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC14.32□□□□□ -0.12
PTPN6P29350 INO80C-210ENST00000590757 595 ntTSL 2 BASIC14.32□□□□□ -0.12
PTPN6P29350 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC14.32□□□□□ -0.12
PTPN6P29350 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
PTPN6P29350 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC14.32□□□□□ -0.12
PTPN6P29350 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
PTPN6P29350 PLXDC1-201ENST00000315392 6252 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
PTPN6P29350 RBPMS-201ENST00000287771 2974 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
PTPN6P29350 AFAP1L1-205ENST00000515000 2319 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
PTPN6P29350 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC14.32□□□□□ -0.12
PTPN6P29350 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC14.32□□□□□ -0.12
PTPN6P29350 PHF14-215ENST00000634607 3407 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
PTPN6P29350 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC14.32□□□□□ -0.12
PTPN6P29350 ACSM1-201ENST00000307493 2051 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
PTPN6P29350 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC14.32□□□□□ -0.12
PTPN6P29350 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
PTPN6P29350 CYP1A1-207ENST00000567032 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
PTPN6P29350 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC14.32□□□□□ -0.12
PTPN6P29350 TOX3-201ENST00000219746 3233 ntAPPRIS P4 TSL 2 BASIC14.32□□□□□ -0.12
PTPN6P29350 MAGIX-208ENST00000616266 3295 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
PTPN6P29350 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC14.31□□□□□ -0.12
PTPN6P29350 AC092135.3-201ENST00000624151 1846 ntBASIC14.31□□□□□ -0.12
PTPN6P29350 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
PTPN6P29350 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
PTPN6P29350 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC14.31□□□□□ -0.12
PTPN6P29350 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
PTPN6P29350 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
PTPN6P29350 MLLT6-211ENST00000621332 7578 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
PTPN6P29350 AC092506.1-201ENST00000634580 2275 ntTSL 5 BASIC14.31□□□□□ -0.12
PTPN6P29350 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC14.31□□□□□ -0.12
PTPN6P29350 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC14.31□□□□□ -0.12
PTPN6P29350 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC14.31□□□□□ -0.12
PTPN6P29350 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC14.31□□□□□ -0.12
PTPN6P29350 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
PTPN6P29350 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
PTPN6P29350 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
PTPN6P29350 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
PTPN6P29350 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC14.31□□□□□ -0.12
PTPN6P29350 DUSP27-201ENST00000271385 3597 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
PTPN6P29350 RSPRY1-202ENST00000537866 3586 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
PTPN6P29350 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
PTPN6P29350 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
PTPN6P29350 MLXIPL-203ENST00000354613 3215 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
PTPN6P29350 ARHGAP9-213ENST00000550288 2818 ntTSL 2 BASIC14.31□□□□□ -0.12
PTPN6P29350 NADSYN1-216ENST00000530055 2416 ntTSL 2 BASIC14.31□□□□□ -0.12
PTPN6P29350 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC14.31□□□□□ -0.12
PTPN6P29350 AL158070.2-201ENST00000623713 1621 ntBASIC14.31□□□□□ -0.12
PTPN6P29350 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
PTPN6P29350 PTGES3-207ENST00000614328 2077 ntTSL 3 BASIC14.31□□□□□ -0.12
PTPN6P29350 SOGA3-201ENST00000465909 3756 ntTSL 5 BASIC14.31□□□□□ -0.12
PTPN6P29350 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
PTPN6P29350 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC14.31□□□□□ -0.12
PTPN6P29350 COPE-202ENST00000349893 948 ntTSL 2 BASIC14.31□□□□□ -0.12
PTPN6P29350 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
PTPN6P29350 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC14.31□□□□□ -0.12
PTPN6P29350 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
PTPN6P29350 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC14.31□□□□□ -0.12
PTPN6P29350 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC14.31□□□□□ -0.12
PTPN6P29350 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
PTPN6P29350 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
PTPN6P29350 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC14.31□□□□□ -0.12
PTPN6P29350 AP005018.1-201ENST00000525475 301 ntBASIC14.31□□□□□ -0.12
PTPN6P29350 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC14.31□□□□□ -0.12
PTPN6P29350 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC14.31□□□□□ -0.12
PTPN6P29350 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC14.31□□□□□ -0.12
PTPN6P29350 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
PTPN6P29350 AC007431.3-201ENST00000623221 587 ntBASIC14.31□□□□□ -0.12
PTPN6P29350 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC14.31□□□□□ -0.12
PTPN6P29350 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC14.31□□□□□ -0.12
PTPN6P29350 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC14.31□□□□□ -0.12
PTPN6P29350 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC14.31□□□□□ -0.12
PTPN6P29350 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
PTPN6P29350 C1R-201ENST00000535233 2211 ntTSL 2 BASIC14.31□□□□□ -0.12
PTPN6P29350 KLF4-201ENST00000374672 2813 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
PTPN6P29350 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
PTPN6P29350 NKIRAS2-201ENST00000307641 2948 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
PTPN6P29350 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
PTPN6P29350 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 363.3 ms