Protein–RNA interactions for Protein: P23396

RPS3, 40S ribosomal protein S3, humanhuman

Known RBP eCLIP

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3P23396 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC27.06■■□□□ 1.922e-8■□□□□ 8.2
RPS3P23396 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC26.9■■□□□ 1.92e-8■□□□□ 8.2
RPS3P23396 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC26.52■■□□□ 1.842e-8■□□□□ 8.2
RPS3P23396 FTCD-212ENST00000498355 1936 ntTSL 226.45■■□□□ 1.822e-8■□□□□ 8.2
RPS3P23396 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.652e-8■□□□□ 8.2
RPS3P23396 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC18.18■□□□□ 0.54e-6■□□□□ 8.2
RPS3P23396 GGNBP2-216ENST00000618837 2346 ntTSL 218.12■□□□□ 0.494e-6■□□□□ 8.2
RPS3P23396 ANP32A-207ENST00000486054 2015 ntTSL 217.36■□□□□ 0.374e-6■□□□□ 8.2
RPS3P23396 GGNBP2-214ENST00000616019 695 ntTSL 217.32■□□□□ 0.364e-6■□□□□ 8.2
RPS3P23396 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.314e-6■□□□□ 8.2
RPS3P23396 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC16.13■□□□□ 0.174e-6■□□□□ 8.2
RPS3P23396 IST1-218ENST00000541180 635 ntTSL 1 (best)15.93■□□□□ 0.144e-6■□□□□ 8.2
RPS3P23396 PSMD5-206ENST00000476949 382 ntTSL 214.61□□□□□ -0.074e-6■□□□□ 8.2
RPS3P23396 GGNBP2-215ENST00000617860 3497 ntTSL 213.74□□□□□ -0.214e-6■□□□□ 8.2
RPS3P23396 PSMD5-208ENST00000625444 219 ntTSL 5 BASIC13.38□□□□□ -0.274e-6■□□□□ 8.2
RPS3P23396 LASP1-208ENST00000584106 1167 ntTSL 212.74□□□□□ -0.374e-6■□□□□ 8.2
RPS3P23396 PSMD5-201ENST00000210313 3443 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.44e-6■□□□□ 8.2
RPS3P23396 PSMD5-205ENST00000471789 567 ntTSL 210.99□□□□□ -0.654e-6■□□□□ 8.2
RPS3P23396 UBE2D3-203ENST00000343106 2389 ntAPPRIS P4 TSL 2 BASIC9.64□□□□□ -0.874e-6■□□□□ 8.2
RPS3P23396 UBE2D3-224ENST00000508474 4819 ntTSL 27.25□□□□□ -1.254e-6■□□□□ 8.2
RPS3P23396 TUBB6-204ENST00000586691 359 ntTSL 26.54□□□□□ -1.364e-6■□□□□ 8.2
RPS3P23396 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC3.51□□□□□ -1.854e-6■□□□□ 8.2
RPS3P23396 IST1-209ENST00000536027 823 ntTSL 32.6□□□□□ -1.994e-6■□□□□ 8.2
RPS3P23396 DHX15-202ENST00000503562 727 ntTSL 20.47□□□□□ -2.334e-6■□□□□ 8.2
RPS3P23396 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC15.17■□□□□ 0.026e-10■□□□□ 8.2
RPS3P23396 PIGT-205ENST00000432270 832 ntTSL 313.97□□□□□ -0.176e-10■□□□□ 8.2
RPS3P23396 PIGT-245ENST00000639417 880 ntTSL 313.97□□□□□ -0.176e-10■□□□□ 8.2
RPS3P23396 PIGT-242ENST00000639286 861 ntTSL 513.2□□□□□ -0.36e-10■□□□□ 8.2
RPS3P23396 PIGT-208ENST00000545755 1158 ntTSL 5 BASIC12.93□□□□□ -0.346e-10■□□□□ 8.2
RPS3P23396 PIGT-213ENST00000638353 970 ntTSL 1 (best)12.86□□□□□ -0.356e-10■□□□□ 8.2
RPS3P23396 PIGT-244ENST00000639382 1193 ntTSL 1 (best)12.86□□□□□ -0.356e-10■□□□□ 8.2
RPS3P23396 PIGT-239ENST00000639235 961 ntTSL 1 (best)12.83□□□□□ -0.366e-10■□□□□ 8.2
RPS3P23396 PIGT-240ENST00000639239 505 ntTSL 212.69□□□□□ -0.386e-10■□□□□ 8.2
RPS3P23396 PIGT-218ENST00000638478 1076 ntTSL 39.68□□□□□ -0.866e-10■□□□□ 8.2
RPS3P23396 PIGT-223ENST00000638641 2164 nt9.15□□□□□ -0.946e-10■□□□□ 8.2
RPS3P23396 UBR4-201ENST00000375218 4031 ntTSL 2 BASIC7.75□□□□□ -1.176e-12■□□□□ 8.2
RPS3P23396 AKAP1-209ENST00000572560 442 ntTSL 314.85□□□□□ -0.035e-8■□□□□ 8.2
RPS3P23396 FST-203ENST00000491717 640 ntTSL 29.19□□□□□ -0.945e-8■□□□□ 8.2
RPS3P23396 RPS11-207ENST00000601216 602 ntTSL 48.98□□□□□ -0.973e-38■□□□□ 8.2
RPS3P23396 RPS11-203ENST00000596873 583 ntTSL 2 BASIC7.22□□□□□ -1.253e-38■□□□□ 8.2
RPS3P23396 ARID3A-204ENST00000585895 377 ntTSL 225.66■■□□□ 1.78e-11■□□□□ 8.2
RPS3P23396 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.264e-6■□□□□ 8.2
RPS3P23396 ARFGAP1-214ENST00000520485 1548 ntTSL 222.65■■□□□ 1.224e-6■□□□□ 8.2
RPS3P23396 PNPLA2-205ENST00000531923 637 ntTSL 222.1■■□□□ 1.134e-6■□□□□ 8.2
RPS3P23396 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.058e-11■□□□□ 8.2
RPS3P23396 IMPA2-210ENST00000590107 1616 ntTSL 521.31■■□□□ 18e-11■□□□□ 8.2
RPS3P23396 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.984e-6■□□□□ 8.2
RPS3P23396 IMPA2-202ENST00000383376 1575 ntTSL 1 (best)20.4■□□□□ 0.868e-11■□□□□ 8.2
RPS3P23396 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC20.36■□□□□ 0.858e-11■□□□□ 8.2
RPS3P23396 MAP2K2-208ENST00000599345 923 ntTSL 520.15■□□□□ 0.824e-6■□□□□ 8.2
RPS3P23396 IMPA2-205ENST00000588752 651 ntTSL 320.01■□□□□ 0.798e-11■□□□□ 8.2
RPS3P23396 IMPA2-211ENST00000590138 895 ntTSL 519.47■□□□□ 0.718e-11■□□□□ 8.2
RPS3P23396 SEPT9-214ENST00000586456 545 ntTSL 219.37■□□□□ 0.698e-9■□□□□ 8.2
RPS3P23396 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC19.33■□□□□ 0.684e-6■□□□□ 8.2
RPS3P23396 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC18.68■□□□□ 0.588e-11■□□□□ 8.2
RPS3P23396 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.534e-6■□□□□ 8.2
RPS3P23396 TMBIM1-221ENST00000476429 462 ntTSL 317.85■□□□□ 0.454e-6■□□□□ 8.2
RPS3P23396 PNPLA2-202ENST00000525250 2726 ntTSL 217.77■□□□□ 0.444e-6■□□□□ 8.2
RPS3P23396 ARFGAP1-209ENST00000518794 2727 ntTSL 1 (best)17.6■□□□□ 0.414e-6■□□□□ 8.2
RPS3P23396 ARFGAP1-207ENST00000518618 1244 ntTSL 217.34■□□□□ 0.374e-6■□□□□ 8.2
RPS3P23396 PNPLA2-204ENST00000529255 1301 ntTSL 1 (best)17.28■□□□□ 0.364e-6■□□□□ 8.2
RPS3P23396 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.318e-9■□□□□ 8.2
RPS3P23396 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.38e-11■□□□□ 8.2
RPS3P23396 NELFCD-202ENST00000464363 764 ntTSL 216.92■□□□□ 0.34e-6■□□□□ 8.2
RPS3P23396 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC16.73■□□□□ 0.274e-6■□□□□ 8.2
RPS3P23396 NELFCD-201ENST00000460601 2137 ntTSL 1 (best)16.63■□□□□ 0.254e-6■□□□□ 8.2
RPS3P23396 ARFGAP1-205ENST00000468975 2640 ntTSL 216.55■□□□□ 0.244e-6■□□□□ 8.2
RPS3P23396 NELFCD-208ENST00000482747 1701 ntTSL 216.5■□□□□ 0.234e-6■□□□□ 8.2
RPS3P23396 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC16.4■□□□□ 0.224e-6■□□□□ 8.2
RPS3P23396 ARFGAP1-222ENST00000549076 913 ntTSL 216.33■□□□□ 0.24e-6■□□□□ 8.2
RPS3P23396 ARFGAP1-204ENST00000395285 2697 ntTSL 215.97■□□□□ 0.154e-6■□□□□ 8.2
RPS3P23396 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC15.7■□□□□ 0.14e-6■□□□□ 8.2
RPS3P23396 NELFCD-203ENST00000471621 902 ntTSL 215.64■□□□□ 0.094e-6■□□□□ 8.2
RPS3P23396 NELFCD-211ENST00000492016 606 ntTSL 215.64■□□□□ 0.094e-6■□□□□ 8.2
RPS3P23396 SEPT9-224ENST00000589246 594 ntTSL 214.97□□□□□ -0.018e-9■□□□□ 8.2
RPS3P23396 MTTP-211ENST00000515141 608 ntTSL 414.59□□□□□ -0.078e-9■□□□□ 8.2
RPS3P23396 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.14e-6■□□□□ 8.2
RPS3P23396 ARFGAP1-202ENST00000370275 3467 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.154e-6■□□□□ 8.2
RPS3P23396 IMPA2-207ENST00000588927 787 ntTSL 5 BASIC13.66□□□□□ -0.228e-11■□□□□ 8.2
RPS3P23396 ARFGAP1-212ENST00000519604 3191 ntTSL 2 BASIC13.57□□□□□ -0.244e-6■□□□□ 8.2
RPS3P23396 AGXT-203ENST00000472436 1034 ntTSL 213.15□□□□□ -0.38e-9■□□□□ 8.2
RPS3P23396 MTTP-205ENST00000505094 554 ntTSL 412.85□□□□□ -0.358e-9■□□□□ 8.2
RPS3P23396 MTTP-209ENST00000511610 551 ntTSL 412.69□□□□□ -0.388e-9■□□□□ 8.2
RPS3P23396 ERBB3-210ENST00000549472 519 ntTSL 511.82□□□□□ -0.528e-9■□□□□ 8.2
RPS3P23396 MTTP-210ENST00000513404 564 ntTSL 411.4□□□□□ -0.588e-9■□□□□ 8.2
RPS3P23396 HERPUD1-216ENST00000568814 509 ntTSL 210.1□□□□□ -0.798e-11■□□□□ 8.2
RPS3P23396 MTTP-202ENST00000422897 1155 ntTSL 1 (best) BASIC10.07□□□□□ -0.88e-9■□□□□ 8.2
RPS3P23396 WWTR1-205ENST00000471586 584 ntTSL 39.65□□□□□ -0.864e-6■□□□□ 8.2
RPS3P23396 WWTR1-210ENST00000485244 560 ntTSL 48.75□□□□□ -1.014e-6■□□□□ 8.2
RPS3P23396 NACA-207ENST00000546917 299 ntTSL 28.36□□□□□ -1.079e-17■□□□□ 8.2
RPS3P23396 WWTR1-206ENST00000472417 955 ntTSL 37.69□□□□□ -1.184e-6■□□□□ 8.2
RPS3P23396 WWTR1-212ENST00000494754 566 ntTSL 47.44□□□□□ -1.224e-6■□□□□ 8.2
RPS3P23396 ATP6V0B-212ENST00000532072 577 ntTSL 46.89□□□□□ -1.314e-6■□□□□ 8.2
RPS3P23396 PRPSAP1-209ENST00000494662 572 ntTSL 25.79□□□□□ -1.484e-6■□□□□ 8.2
RPS3P23396 MTTP-207ENST00000506883 549 ntTSL 35.69□□□□□ -1.58e-9■□□□□ 8.2
RPS3P23396 MTTP-206ENST00000505142 537 ntTSL 44.83□□□□□ -1.648e-9■□□□□ 8.2
RPS3P23396 SLC5A6-216ENST00000481751 615 ntTSL 212.12□□□□□ -0.475e-11■□□□□ 8.1
RPS3P23396 CCND3-211ENST00000508143 574 ntTSL 417.51■□□□□ 0.393e-7■□□□□ 8.1
RPS3P23396 CCND3-219ENST00000513956 562 ntTSL 217.51■□□□□ 0.393e-7■□□□□ 8.1
RPS3P23396 CCND3-210ENST00000506555 308 ntTSL 311.87□□□□□ -0.513e-7■□□□□ 8.1
Retrieved 100 of 24,271 protein–RNA pairs in 597 ms