RNA–Protein interactions for RNA: ENST00000617860.4

GGNBP2-215, Transcript of gametogenetin binding protein 2, humanhuman

TSL 2

Gene GGNBP2, Length 3,497 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGNBP2-215ENST00000617860 NISCHQ9Y2I1 1504 aa27.81■■■□□ 2.04
GGNBP2-215ENST00000617860 SHROOM4Q9ULL8 1493 aa25.12■■□□□ 1.61
GGNBP2-215ENST00000617860 SUPT5HO00267 1087 aaKnown RBP24.87■■□□□ 1.57
GGNBP2-215ENST00000617860 DCAF8L2P0C7V8 631 aa24.7■■□□□ 1.54
GGNBP2-215ENST00000617860 PCGF6Q9BYE7 350 aa23.7■■□□□ 1.38
GGNBP2-215ENST00000617860 CHIC1Q5VXU3 224 aa23.68■■□□□ 1.38
GGNBP2-215ENST00000617860 LOC105371045A0A1W2PR82 267 aa23.42■■□□□ 1.34
GGNBP2-215ENST00000617860 ZCCHC6Q5VYS8 1495 aaKnown RBP23.42■■□□□ 1.34
GGNBP2-215ENST00000617860 EHMT2Q96KQ7 1210 aa23.38■■□□□ 1.33
GGNBP2-215ENST00000617860 MYO15BQ96JP2 1530 aa23.38■■□□□ 1.33
GGNBP2-215ENST00000617860 HRCP23327 699 aa23.35■■□□□ 1.33
GGNBP2-215ENST00000617860 PPARGC1BQ86YN6 1023 aaKnown RBP23.31■■□□□ 1.32
GGNBP2-215ENST00000617860 FAM9AQ8IZU1 332 aaPredicted RBP23.17■■□□□ 1.3
GGNBP2-215ENST00000617860 CCDC180Q9P1Z9 1646 aa22.95■■□□□ 1.26
GGNBP2-215ENST00000617860 PELP1Q8IZL8 1130 aaKnown RBP22.88■■□□□ 1.25
GGNBP2-215ENST00000617860 TRIM41Q8WV44 630 aa22.86■■□□□ 1.25
GGNBP2-215ENST00000617860 TRIM26Q12899 539 aaPredicted RBP22.74■■□□□ 1.23
GGNBP2-215ENST00000617860 TTBK1Q5TCY1 1321 aaPredicted RBP22.59■■□□□ 1.21
GGNBP2-215ENST00000617860 DCAF1Q9Y4B6 1507 aa22.46■■□□□ 1.19
GGNBP2-215ENST00000617860 SCRIBQ14160 1630 aa22.42■■□□□ 1.18
GGNBP2-215ENST00000617860 MYT1Q01538 1121 aa22.33■■□□□ 1.17
GGNBP2-215ENST00000617860 RSF1Q96T23 1441 aaPredicted RBP22.33■■□□□ 1.17
GGNBP2-215ENST00000617860 ABCC9O60706 1549 aa22.3■■□□□ 1.16
GGNBP2-215ENST00000617860 ZEB1P37275 1124 aaPredicted RBP22.23■■□□□ 1.15
GGNBP2-215ENST00000617860 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.21■■□□□ 1.15
GGNBP2-215ENST00000617860 CCER1Q8TC90 406 aaPredicted RBP22.18■■□□□ 1.14
GGNBP2-215ENST00000617860 RB1CC1Q8TDY2 1594 aa22.06■■□□□ 1.12
GGNBP2-215ENST00000617860 CECR2Q9BXF3 1484 aa22.04■■□□□ 1.12
GGNBP2-215ENST00000617860 RANGAP1P46060 587 aaPredicted RBP21.98■■□□□ 1.11
GGNBP2-215ENST00000617860 UBTFP17480 764 aaKnown RBP21.96■■□□□ 1.11
GGNBP2-215ENST00000617860 MROH2BQ7Z745 1585 aa21.82■■□□□ 1.08
GGNBP2-215ENST00000617860 SCAF1Q9H7N4 1312 aaKnown RBP21.8■■□□□ 1.08
GGNBP2-215ENST00000617860 PABPN1Q86U42 306 aaKnown RBP eCLIP21.8■■□□□ 1.08
GGNBP2-215ENST00000617860 YTHDC1Q96MU7 727 aaKnown RBP21.7■■□□□ 1.06
GGNBP2-215ENST00000617860 HNRNPUL2Q1KMD3 747 aaKnown RBP21.68■■□□□ 1.06
GGNBP2-215ENST00000617860 DIEXFQ68CQ4 756 aaKnown RBP21.68■■□□□ 1.06
GGNBP2-215ENST00000617860 WIZO95785 1651 aa21.66■■□□□ 1.06
GGNBP2-215ENST00000617860 NEUROD1Q13562 356 aa21.56■■□□□ 1.04
GGNBP2-215ENST00000617860 CSRNP3Q8WYN3 585 aa21.54■■□□□ 1.04
GGNBP2-215ENST00000617860 APLP2Q06481 763 aa21.53■■□□□ 1.04
GGNBP2-215ENST00000617860 ABCC8Q09428 1581 aa21.52■■□□□ 1.04
GGNBP2-215ENST00000617860 NACADO15069 1562 aa21.51■■□□□ 1.03
GGNBP2-215ENST00000617860 CENPBP07199 599 aaPredicted RBP21.5■■□□□ 1.03
GGNBP2-215ENST00000617860 GTF3C3Q9Y5Q9 886 aa21.5■■□□□ 1.03
GGNBP2-215ENST00000617860 CCDC88BA6NC98 1476 aa21.49■■□□□ 1.03
GGNBP2-215ENST00000617860 SOGA1O94964 1423 aa21.49■■□□□ 1.03
GGNBP2-215ENST00000617860 ACIN1Q9UKV3 1341 aaKnown RBP21.47■■□□□ 1.03
GGNBP2-215ENST00000617860 CEP162Q5TB80 1403 aa21.42■■□□□ 1.02
GGNBP2-215ENST00000617860 RUSC2Q8N2Y8 1516 aa21.33■■□□□ 1
GGNBP2-215ENST00000617860 BAZ1AQ9NRL2 1556 aaPredicted RBP21.32■■□□□ 1
GGNBP2-215ENST00000617860 PRKCSHP14314 528 aaPredicted RBP21.3■■□□□ 1
GGNBP2-215ENST00000617860 ZNF316A6NFI3 1004 aaPredicted RBP21.29■■□□□ 1
GGNBP2-215ENST00000617860 ITGAEP38570 1179 aa21.24■□□□□ 0.99
GGNBP2-215ENST00000617860 TNIKQ9UKE5 1360 aa21.2■□□□□ 0.98
GGNBP2-215ENST00000617860 MIER1Q8N108 512 aa21.17■□□□□ 0.98
GGNBP2-215ENST00000617860 WRNQ14191 1432 aaPredicted RBP eCLIP21.11■□□□□ 0.97
GGNBP2-215ENST00000617860 TOP2AP11388 1531 aaKnown RBP21.1■□□□□ 0.97
GGNBP2-215ENST00000617860 BCL11AQ9H165 835 aa21.08■□□□□ 0.96
GGNBP2-215ENST00000617860 CLIP1P30622 1438 aa21.05■□□□□ 0.96
GGNBP2-215ENST00000617860 GOLGA3Q08378 1498 aa21.05■□□□□ 0.96
GGNBP2-215ENST00000617860 ATP1B4Q9UN42 357 aaPredicted RBP21.05■□□□□ 0.96
GGNBP2-215ENST00000617860 SMARCA4P51532 1647 aa21.04■□□□□ 0.96
GGNBP2-215ENST00000617860 SMARCA2P51531 1590 aa21.04■□□□□ 0.96
GGNBP2-215ENST00000617860 EEA1Q15075 1411 aa20.95■□□□□ 0.95
GGNBP2-215ENST00000617860 CEP164Q9UPV0 1460 aa20.87■□□□□ 0.93
GGNBP2-215ENST00000617860 EIF4G1Q04637 1599 aaKnown RBP20.86■□□□□ 0.93
GGNBP2-215ENST00000617860 KANK4Q5T7N3 995 aaPredicted RBP20.84■□□□□ 0.93
GGNBP2-215ENST00000617860 RAPGEF2Q9Y4G8 1499 aa20.84■□□□□ 0.93
GGNBP2-215ENST00000617860 P3H3Q8IVL6 736 aa20.8■□□□□ 0.92
GGNBP2-215ENST00000617860 BAZ1BQ9UIG0 1483 aaKnown RBP20.79■□□□□ 0.92
GGNBP2-215ENST00000617860 VPS8Q8N3P4 1428 aa20.77■□□□□ 0.92
GGNBP2-215ENST00000617860 FAM50AQ14320 339 aaKnown RBP20.73■□□□□ 0.91
GGNBP2-215ENST00000617860 SYNJ1O43426 1573 aa20.72■□□□□ 0.91
GGNBP2-215ENST00000617860 ATAD2BQ9ULI0 1458 aa20.67■□□□□ 0.9
GGNBP2-215ENST00000617860 ERICH6Q7L0X2 663 aa20.66■□□□□ 0.9
GGNBP2-215ENST00000617860 HIRIP3Q9BW71 556 aaPredicted RBP20.66■□□□□ 0.9
GGNBP2-215ENST00000617860 BCANQ96GW7 911 aa20.65■□□□□ 0.9
GGNBP2-215ENST00000617860 UNC13AQ9UPW8 1703 aa20.6■□□□□ 0.89
GGNBP2-215ENST00000617860 DDX10Q13206 875 aaKnown RBP20.55■□□□□ 0.88
GGNBP2-215ENST00000617860 KCNH8Q96L42 1107 aa20.55■□□□□ 0.88
GGNBP2-215ENST00000617860 BICRAQ9NZM4 1560 aa20.54■□□□□ 0.88
GGNBP2-215ENST00000617860 KIF21BO75037 1637 aa20.54■□□□□ 0.88
GGNBP2-215ENST00000617860 DHX57Q6P158 1386 aaKnown RBP20.53■□□□□ 0.88
GGNBP2-215ENST00000617860 SIN3AQ96ST3 1273 aa20.52■□□□□ 0.88
GGNBP2-215ENST00000617860 KIF27Q86VH2 1401 aa20.45■□□□□ 0.86
GGNBP2-215ENST00000617860 CCNB3Q8WWL7 1395 aa20.43■□□□□ 0.86
GGNBP2-215ENST00000617860 SUPT16HQ9Y5B9 1047 aaKnown RBP20.43■□□□□ 0.86
GGNBP2-215ENST00000617860 ARAP1Q96P48 1450 aa20.41■□□□□ 0.86
GGNBP2-215ENST00000617860 TRIM52Q96A61 297 aa20.38■□□□□ 0.85
GGNBP2-215ENST00000617860 RAB3GAP2Q9H2M9 1393 aa20.34■□□□□ 0.85
GGNBP2-215ENST00000617860 ARID3CA6NKF2 412 aa20.34■□□□□ 0.85
GGNBP2-215ENST00000617860 CLSPNQ9HAW4 1339 aa20.34■□□□□ 0.85
GGNBP2-215ENST00000617860 FKBP8Q14318 412 aa20.33■□□□□ 0.85
GGNBP2-215ENST00000617860 CUX2O14529 1486 aa20.32■□□□□ 0.84
GGNBP2-215ENST00000617860 CNGB1Q14028 1251 aaPredicted RBP20.32■□□□□ 0.84
GGNBP2-215ENST00000617860 PRXQ9BXM0 1461 aa20.29■□□□□ 0.84
GGNBP2-215ENST00000617860 NEFLP07196 543 aa20.28■□□□□ 0.84
GGNBP2-215ENST00000617860 CARMIL1Q5VZK9 1371 aa20.25■□□□□ 0.83
GGNBP2-215ENST00000617860 TOP2BQ02880 1626 aa20.25■□□□□ 0.83
GGNBP2-215ENST00000617860 PEG3Q9GZU2 1588 aa20.24■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms