Protein–RNA interactions for Protein: P22894

MMP8, Neutrophil collagenase, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP8P22894 AC138696.2-201ENST00000607376 223 ntBASIC15.8■□□□□ 0.12
MMP8P22894 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
MMP8P22894 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC15.8■□□□□ 0.12
MMP8P22894 MAGED4B-202ENST00000360134 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
MMP8P22894 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
MMP8P22894 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC15.8■□□□□ 0.12
MMP8P22894 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC15.8■□□□□ 0.12
MMP8P22894 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC15.8■□□□□ 0.12
MMP8P22894 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
MMP8P22894 AGGF1P1-201ENST00000509500 2073 ntBASIC15.8■□□□□ 0.12
MMP8P22894 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
MMP8P22894 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
MMP8P22894 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC15.8■□□□□ 0.12
MMP8P22894 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC15.8■□□□□ 0.12
MMP8P22894 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
MMP8P22894 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
MMP8P22894 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
MMP8P22894 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
MMP8P22894 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC15.79■□□□□ 0.12
MMP8P22894 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC15.79■□□□□ 0.12
MMP8P22894 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC15.79■□□□□ 0.12
MMP8P22894 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
MMP8P22894 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC15.79■□□□□ 0.12
MMP8P22894 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC15.79■□□□□ 0.12
MMP8P22894 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC15.79■□□□□ 0.12
MMP8P22894 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
MMP8P22894 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
MMP8P22894 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
MMP8P22894 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC15.79■□□□□ 0.12
MMP8P22894 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
MMP8P22894 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
MMP8P22894 PTPA-220ENST00000436883 532 ntTSL 4 BASIC15.79■□□□□ 0.12
MMP8P22894 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC15.79■□□□□ 0.12
MMP8P22894 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC15.79■□□□□ 0.12
MMP8P22894 USP32P1-208ENST00000506594 1164 ntBASIC15.79■□□□□ 0.12
MMP8P22894 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
MMP8P22894 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC15.79■□□□□ 0.12
MMP8P22894 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC15.79■□□□□ 0.12
MMP8P22894 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC15.79■□□□□ 0.12
MMP8P22894 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC15.79■□□□□ 0.12
MMP8P22894 AC138466.3-201ENST00000619983 221 ntBASIC15.79■□□□□ 0.12
MMP8P22894 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC15.79■□□□□ 0.12
MMP8P22894 SNX18-202ENST00000343017 3140 ntBASIC15.79■□□□□ 0.12
MMP8P22894 CLCNKA-201ENST00000331433 2475 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
MMP8P22894 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
MMP8P22894 SELPLG-202ENST00000388962 1613 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
MMP8P22894 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
MMP8P22894 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
MMP8P22894 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC15.78■□□□□ 0.12
MMP8P22894 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
MMP8P22894 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
MMP8P22894 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
MMP8P22894 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC15.78■□□□□ 0.12
MMP8P22894 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC15.78■□□□□ 0.12
MMP8P22894 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
MMP8P22894 MSTO1-202ENST00000368341 2245 ntTSL 2 BASIC15.78■□□□□ 0.12
MMP8P22894 OXTR-201ENST00000316793 4364 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
MMP8P22894 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
MMP8P22894 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
MMP8P22894 AC092933.1-201ENST00000393644 945 ntBASIC15.78■□□□□ 0.12
MMP8P22894 AL512384.1-201ENST00000406683 331 ntBASIC15.78■□□□□ 0.12
MMP8P22894 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC15.78■□□□□ 0.12
MMP8P22894 RPL28-203ENST00000428193 573 ntTSL 2 BASIC15.78■□□□□ 0.12
MMP8P22894 RPL28-204ENST00000431533 590 ntTSL 2 BASIC15.78■□□□□ 0.12
MMP8P22894 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC15.78■□□□□ 0.12
MMP8P22894 AC022447.6-201ENST00000515522 438 ntBASIC15.78■□□□□ 0.12
MMP8P22894 SLC25A47P1-201ENST00000531577 414 ntBASIC15.78■□□□□ 0.12
MMP8P22894 RPL28-207ENST00000558815 616 ntTSL 2 BASIC15.78■□□□□ 0.12
MMP8P22894 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC15.78■□□□□ 0.12
MMP8P22894 AC025279.2-201ENST00000569730 653 ntBASIC15.78■□□□□ 0.12
MMP8P22894 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC15.78■□□□□ 0.12
MMP8P22894 PIGL-212ENST00000581006 554 ntTSL 4 BASIC15.78■□□□□ 0.12
MMP8P22894 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
MMP8P22894 AC132938.4-201ENST00000623835 848 ntBASIC15.78■□□□□ 0.12
MMP8P22894 AL358472.5-202ENST00000641448 1267 ntBASIC15.78■□□□□ 0.12
MMP8P22894 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
MMP8P22894 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
MMP8P22894 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
MMP8P22894 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
MMP8P22894 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC15.78■□□□□ 0.12
MMP8P22894 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
MMP8P22894 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
MMP8P22894 OSBPL5-202ENST00000348039 2798 ntTSL 2 BASIC15.78■□□□□ 0.12
MMP8P22894 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC15.78■□□□□ 0.12
MMP8P22894 AC011840.2-201ENST00000563063 1520 ntBASIC15.78■□□□□ 0.12
MMP8P22894 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
MMP8P22894 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
MMP8P22894 CU639417.3-201ENST00000624240 1404 ntBASIC15.77■□□□□ 0.12
MMP8P22894 LRRC34-208ENST00000522830 1781 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
MMP8P22894 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.12
MMP8P22894 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
MMP8P22894 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC15.77■□□□□ 0.12
MMP8P22894 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
MMP8P22894 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC15.77■□□□□ 0.12
MMP8P22894 PRNP-201ENST00000379440 2657 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
MMP8P22894 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
MMP8P22894 KIAA1191-201ENST00000298569 2991 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
MMP8P22894 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC15.77■□□□□ 0.12
MMP8P22894 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
MMP8P22894 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 51.9 ms