Protein–RNA interactions for Protein: P11047

LAMC1, Laminin subunit gamma-1, humanhuman

Predictions only

Length 1,609 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LAMC1P11047 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC20.81■□□□□ 0.92
LAMC1P11047 NPLOC4-209ENST00000572760 946 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
LAMC1P11047 AC006435.2-201ENST00000574290 846 ntTSL 5 BASIC20.81■□□□□ 0.92
LAMC1P11047 NAT9-211ENST00000580632 799 ntTSL 3 BASIC20.81■□□□□ 0.92
LAMC1P11047 FAM104A-206ENST00000583024 417 ntTSL 3 BASIC20.81■□□□□ 0.92
LAMC1P11047 AC007881.3-201ENST00000608897 607 ntBASIC20.81■□□□□ 0.92
LAMC1P11047 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC20.81■□□□□ 0.92
LAMC1P11047 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
LAMC1P11047 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
LAMC1P11047 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
LAMC1P11047 AC046158.3-201ENST00000624947 2558 ntBASIC20.8■□□□□ 0.92
LAMC1P11047 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
LAMC1P11047 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC20.8■□□□□ 0.92
LAMC1P11047 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
LAMC1P11047 LINC00513-201ENST00000447430 1616 ntTSL 5 BASIC20.8■□□□□ 0.92
LAMC1P11047 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
LAMC1P11047 AC009093.10-201ENST00000641956 1442 ntBASIC20.8■□□□□ 0.92
LAMC1P11047 FOXO4-201ENST00000341558 1353 ntTSL 5 BASIC20.8■□□□□ 0.92
LAMC1P11047 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
LAMC1P11047 S100A2-203ENST00000368709 457 ntAPPRIS P1 TSL 3 BASIC20.8■□□□□ 0.92
LAMC1P11047 AC097065.1-201ENST00000425737 517 ntBASIC20.8■□□□□ 0.92
LAMC1P11047 AC114488.1-201ENST00000435872 591 ntTSL 3 BASIC20.8■□□□□ 0.92
LAMC1P11047 BX276092.5-201ENST00000439926 886 ntTSL 5 BASIC20.8■□□□□ 0.92
LAMC1P11047 PPFIBP1-204ENST00000535047 875 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
LAMC1P11047 ZNF286A-219ENST00000585194 607 ntTSL 4 BASIC20.8■□□□□ 0.92
LAMC1P11047 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC20.8■□□□□ 0.92
LAMC1P11047 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC20.8■□□□□ 0.92
LAMC1P11047 ORMDL3-202ENST00000394169 2230 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
LAMC1P11047 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
LAMC1P11047 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
LAMC1P11047 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
LAMC1P11047 COLEC11-203ENST00000382062 1633 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
LAMC1P11047 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
LAMC1P11047 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC20.8■□□□□ 0.92
LAMC1P11047 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC20.8■□□□□ 0.92
LAMC1P11047 THY1-206ENST00000528522 2050 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
LAMC1P11047 LCMT1-203ENST00000399069 1368 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
LAMC1P11047 MAP2K4-201ENST00000353533 3826 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
LAMC1P11047 AL139339.1-201ENST00000411906 657 ntTSL 2 BASIC20.79■□□□□ 0.92
LAMC1P11047 SAPCD1-208ENST00000415669 916 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
LAMC1P11047 RHBDD2-203ENST00000428119 1274 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
LAMC1P11047 HLA-DQB2-232ENST00000437316 1214 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
LAMC1P11047 RN7SL818P-201ENST00000485099 259 ntBASIC20.79■□□□□ 0.92
LAMC1P11047 MPZL3-203ENST00000525386 973 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
LAMC1P11047 AC141586.1-203ENST00000567242 366 ntBASIC20.79■□□□□ 0.92
LAMC1P11047 RN7SL725P-201ENST00000606439 259 ntBASIC20.79■□□□□ 0.92
LAMC1P11047 CYP1B1-AS1-221ENST00000627172 995 ntTSL 5 BASIC20.79■□□□□ 0.92
LAMC1P11047 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
LAMC1P11047 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
LAMC1P11047 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
LAMC1P11047 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
LAMC1P11047 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
LAMC1P11047 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
LAMC1P11047 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC20.79■□□□□ 0.92
LAMC1P11047 FUK-207ENST00000571514 3054 ntTSL 2 BASIC20.79■□□□□ 0.92
LAMC1P11047 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC20.79■□□□□ 0.92
LAMC1P11047 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC20.79■□□□□ 0.92
LAMC1P11047 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC20.79■□□□□ 0.92
LAMC1P11047 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
LAMC1P11047 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
LAMC1P11047 UPK3BL1-201ENST00000340457 1342 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
LAMC1P11047 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
LAMC1P11047 ALKBH2-201ENST00000343075 1030 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
LAMC1P11047 CXCL12-202ENST00000374426 470 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
LAMC1P11047 MAD2L2-206ENST00000376672 1002 ntTSL 3 BASIC20.78■□□□□ 0.92
LAMC1P11047 LINC01388-201ENST00000416242 416 ntTSL 3 BASIC20.78■□□□□ 0.92
LAMC1P11047 AL109767.1-201ENST00000429450 564 ntTSL 4 BASIC20.78■□□□□ 0.92
LAMC1P11047 AC091179.2-201ENST00000495536 532 ntTSL 3 BASIC20.78■□□□□ 0.92
LAMC1P11047 AC097103.2-201ENST00000504670 602 ntTSL 2 BASIC20.78■□□□□ 0.92
LAMC1P11047 PCMTD1-207ENST00000522514 1287 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
LAMC1P11047 TMEM218-205ENST00000527271 706 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
LAMC1P11047 AP002387.1-201ENST00000529369 680 ntTSL 2 BASIC20.78■□□□□ 0.92
LAMC1P11047 SIRT3-210ENST00000529382 1225 ntTSL 2 BASIC20.78■□□□□ 0.92
LAMC1P11047 LGALS3-204ENST00000554715 916 ntTSL 3 BASIC20.78■□□□□ 0.92
LAMC1P11047 MIR4649-201ENST00000582839 64 ntBASIC20.78■□□□□ 0.92
LAMC1P11047 ZNF528-AS1-202ENST00000596746 929 ntTSL 5 BASIC20.78■□□□□ 0.92
LAMC1P11047 TNF-208ENST00000449264 1676 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
LAMC1P11047 SLC35G2-201ENST00000393079 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
LAMC1P11047 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
LAMC1P11047 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
LAMC1P11047 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
LAMC1P11047 ARHGAP25-216ENST00000497079 1843 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
LAMC1P11047 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC20.78■□□□□ 0.92
LAMC1P11047 GDI2-203ENST00000380191 2412 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
LAMC1P11047 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
LAMC1P11047 PPIL3-201ENST00000286175 1370 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
LAMC1P11047 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
LAMC1P11047 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
LAMC1P11047 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC20.78■□□□□ 0.92
LAMC1P11047 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
LAMC1P11047 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC20.78■□□□□ 0.92
LAMC1P11047 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
LAMC1P11047 EWSR1-204ENST00000333395 1265 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
LAMC1P11047 MRPL19-201ENST00000358788 693 ntTSL 5 BASIC20.78■□□□□ 0.92
LAMC1P11047 PPDPF-202ENST00000370179 868 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
LAMC1P11047 FMR1NB-201ENST00000370467 1021 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
LAMC1P11047 ESD-202ENST00000378720 1192 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
LAMC1P11047 HNRNPA1P27-201ENST00000412087 955 ntBASIC20.78■□□□□ 0.92
LAMC1P11047 AL009181.1-201ENST00000418471 1085 ntTSL 5 BASIC20.78■□□□□ 0.92
LAMC1P11047 TCERG1L-AS1-201ENST00000436942 472 ntTSL 2 BASIC20.78■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 48.3 ms