Protein–RNA interactions for Protein: P0C0E4

RAB40AL, Ras-related protein Rab-40A-like, humanhuman

Predictions only

Length 278 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40ALP0C0E4 CLIC1-206ENST00000375779 1127 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
RAB40ALP0C0E4 AL136309.1-201ENST00000403917 691 ntBASIC14.21□□□□□ -0.13
RAB40ALP0C0E4 MCFD2-204ENST00000409207 1113 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
RAB40ALP0C0E4 TISP43-201ENST00000409793 538 ntTSL 4 BASIC14.21□□□□□ -0.13
RAB40ALP0C0E4 LIMS4-201ENST00000413601 1215 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
RAB40ALP0C0E4 C9orf116-205ENST00000429260 678 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
RAB40ALP0C0E4 MACROD2-AS1-202ENST00000455291 663 ntTSL 2 BASIC14.21□□□□□ -0.13
RAB40ALP0C0E4 AC126915.1-201ENST00000522847 1038 ntBASIC14.21□□□□□ -0.13
RAB40ALP0C0E4 AP001007.1-201ENST00000526796 645 ntTSL 2 BASIC14.21□□□□□ -0.13
RAB40ALP0C0E4 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
RAB40ALP0C0E4 RPL28-208ENST00000559463 852 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
RAB40ALP0C0E4 NAT9-222ENST00000583476 583 ntTSL 3 BASIC14.21□□□□□ -0.13
RAB40ALP0C0E4 SEPT9-233ENST00000590917 541 ntTSL 4 BASIC14.21□□□□□ -0.13
RAB40ALP0C0E4 AC020914.3-201ENST00000594712 304 ntBASIC14.21□□□□□ -0.13
RAB40ALP0C0E4 KC6-205ENST00000599934 556 ntTSL 4 BASIC14.21□□□□□ -0.13
RAB40ALP0C0E4 KLK11-210ENST00000600362 759 ntTSL 3 BASIC14.21□□□□□ -0.13
RAB40ALP0C0E4 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
RAB40ALP0C0E4 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC14.21□□□□□ -0.13
RAB40ALP0C0E4 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
RAB40ALP0C0E4 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
RAB40ALP0C0E4 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
RAB40ALP0C0E4 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
RAB40ALP0C0E4 ATG10-203ENST00000458350 1795 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
RAB40ALP0C0E4 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
RAB40ALP0C0E4 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC14.21□□□□□ -0.13
RAB40ALP0C0E4 AL109954.1-202ENST00000564051 2148 ntBASIC14.21□□□□□ -0.13
RAB40ALP0C0E4 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
RAB40ALP0C0E4 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.14
RAB40ALP0C0E4 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC14.21□□□□□ -0.14
RAB40ALP0C0E4 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC14.21□□□□□ -0.14
RAB40ALP0C0E4 ZNF451-201ENST00000357489 4998 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.14
RAB40ALP0C0E4 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
RAB40ALP0C0E4 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC14.21□□□□□ -0.14
RAB40ALP0C0E4 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
RAB40ALP0C0E4 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC14.2□□□□□ -0.14
RAB40ALP0C0E4 ZNF750-202ENST00000572562 1513 ntTSL 2 BASIC14.2□□□□□ -0.14
RAB40ALP0C0E4 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
RAB40ALP0C0E4 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
RAB40ALP0C0E4 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
RAB40ALP0C0E4 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC14.2□□□□□ -0.14
RAB40ALP0C0E4 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC14.2□□□□□ -0.14
RAB40ALP0C0E4 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
RAB40ALP0C0E4 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
RAB40ALP0C0E4 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC14.2□□□□□ -0.14
RAB40ALP0C0E4 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
RAB40ALP0C0E4 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
RAB40ALP0C0E4 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC14.2□□□□□ -0.14
RAB40ALP0C0E4 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
RAB40ALP0C0E4 AC105250.1-201ENST00000509378 2057 ntBASIC14.2□□□□□ -0.14
RAB40ALP0C0E4 IP6K2-202ENST00000340879 1185 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
RAB40ALP0C0E4 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC14.2□□□□□ -0.14
RAB40ALP0C0E4 VAMP1-203ENST00000400911 1068 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
RAB40ALP0C0E4 CHMP1AP1-201ENST00000445563 662 ntBASIC14.2□□□□□ -0.14
RAB40ALP0C0E4 SEPT7P2-209ENST00000450436 601 ntTSL 4 BASIC14.2□□□□□ -0.14
RAB40ALP0C0E4 TPI1-206ENST00000488464 791 ntTSL 5 BASIC14.2□□□□□ -0.14
RAB40ALP0C0E4 GDNF-AS1-201ENST00000503382 604 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
RAB40ALP0C0E4 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
RAB40ALP0C0E4 AL133523.1-201ENST00000554537 331 ntTSL 3 BASIC14.2□□□□□ -0.14
RAB40ALP0C0E4 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC14.2□□□□□ -0.14
RAB40ALP0C0E4 Metazoa_SRP.166-201ENST00000612530 253 ntBASIC14.2□□□□□ -0.14
RAB40ALP0C0E4 PRRC2B-210ENST00000638390 1084 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
RAB40ALP0C0E4 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
RAB40ALP0C0E4 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
RAB40ALP0C0E4 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC14.2□□□□□ -0.14
RAB40ALP0C0E4 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
RAB40ALP0C0E4 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC14.2□□□□□ -0.14
RAB40ALP0C0E4 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
RAB40ALP0C0E4 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
RAB40ALP0C0E4 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
RAB40ALP0C0E4 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
RAB40ALP0C0E4 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
RAB40ALP0C0E4 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
RAB40ALP0C0E4 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
RAB40ALP0C0E4 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
RAB40ALP0C0E4 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
RAB40ALP0C0E4 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
RAB40ALP0C0E4 ARRB2-204ENST00000412477 1779 ntTSL 2 BASIC14.19□□□□□ -0.14
RAB40ALP0C0E4 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
RAB40ALP0C0E4 CLUHP2-201ENST00000426660 1303 ntBASIC14.19□□□□□ -0.14
RAB40ALP0C0E4 PCMTD2-207ENST00000609372 1321 ntTSL 4 BASIC14.19□□□□□ -0.14
RAB40ALP0C0E4 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
RAB40ALP0C0E4 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
RAB40ALP0C0E4 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
RAB40ALP0C0E4 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
RAB40ALP0C0E4 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
RAB40ALP0C0E4 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC14.19□□□□□ -0.14
RAB40ALP0C0E4 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
RAB40ALP0C0E4 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
RAB40ALP0C0E4 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC14.19□□□□□ -0.14
RAB40ALP0C0E4 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
RAB40ALP0C0E4 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC14.19□□□□□ -0.14
RAB40ALP0C0E4 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC14.19□□□□□ -0.14
RAB40ALP0C0E4 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
RAB40ALP0C0E4 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
RAB40ALP0C0E4 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
RAB40ALP0C0E4 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC14.19□□□□□ -0.14
RAB40ALP0C0E4 PQBP1-201ENST00000218224 1113 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
RAB40ALP0C0E4 PQBP1-202ENST00000247140 664 ntTSL 3 BASIC14.19□□□□□ -0.14
RAB40ALP0C0E4 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
RAB40ALP0C0E4 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 43.1 ms