Protein–RNA interactions for Protein: P08908

HTR1A, 5-hydroxytryptamine receptor 1A, humanhuman

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTR1AP08908 KARS-201ENST00000302445 2005 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
HTR1AP08908 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
HTR1AP08908 ZC3H4-201ENST00000253048 6119 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
HTR1AP08908 RET-201ENST00000340058 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
HTR1AP08908 FOXF1-201ENST00000262426 3516 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
HTR1AP08908 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
HTR1AP08908 POMT1-201ENST00000341012 2912 ntTSL 2 BASIC13.79□□□□□ -0.2
HTR1AP08908 IFNA6-202ENST00000380210 1544 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
HTR1AP08908 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
HTR1AP08908 SIRT5-203ENST00000379262 2339 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
HTR1AP08908 L3MBTL1-206ENST00000427442 3157 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
HTR1AP08908 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC13.79□□□□□ -0.2
HTR1AP08908 ELOA2-202ENST00000620522 1641 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
HTR1AP08908 SEC14L3-204ENST00000403066 2474 ntTSL 2 BASIC13.79□□□□□ -0.2
HTR1AP08908 PI4K2A-201ENST00000370631 4189 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
HTR1AP08908 PLXNB1-204ENST00000456774 5859 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
HTR1AP08908 MBNL1-205ENST00000355460 5941 ntAPPRIS ALT1 TSL 1 (best) BASIC13.79□□□□□ -0.2
HTR1AP08908 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
HTR1AP08908 VWA8-201ENST00000281496 3475 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
HTR1AP08908 ZFP28-204ENST00000591844 3475 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
HTR1AP08908 LHX6-210ENST00000559895 3587 ntTSL 2 BASIC13.78□□□□□ -0.2
HTR1AP08908 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC13.78□□□□□ -0.2
HTR1AP08908 MYLIP-201ENST00000349606 2796 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
HTR1AP08908 TNFRSF11A-205ENST00000616710 3809 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
HTR1AP08908 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
HTR1AP08908 KDM5B-202ENST00000367264 6449 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
HTR1AP08908 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
HTR1AP08908 SOAT1-203ENST00000539888 6794 ntTSL 2 BASIC13.78□□□□□ -0.2
HTR1AP08908 RHOH-224ENST00000622175 2254 ntAPPRIS P1 TSL 4 BASIC13.78□□□□□ -0.2
HTR1AP08908 SCARF1-201ENST00000263071 3443 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
HTR1AP08908 RPN2-202ENST00000373622 2348 ntTSL 2 BASIC13.78□□□□□ -0.2
HTR1AP08908 SLC41A3-204ENST00000383598 2330 ntAPPRIS P3 TSL 2 BASIC13.78□□□□□ -0.2
HTR1AP08908 DENND1C-202ENST00000543576 2395 ntAPPRIS ALT2 TSL 2 BASIC13.78□□□□□ -0.2
HTR1AP08908 DRD2-201ENST00000346454 2433 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
HTR1AP08908 C2-206ENST00000442278 2434 ntTSL 2 BASIC13.78□□□□□ -0.2
HTR1AP08908 ZBTB47-201ENST00000232974 3781 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
HTR1AP08908 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
HTR1AP08908 MIR346-201ENST00000362234 95 ntBASIC13.78□□□□□ -0.2
HTR1AP08908 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC13.78□□□□□ -0.2
HTR1AP08908 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC13.78□□□□□ -0.2
HTR1AP08908 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
HTR1AP08908 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
HTR1AP08908 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC13.78□□□□□ -0.2
HTR1AP08908 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC13.78□□□□□ -0.2
HTR1AP08908 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC13.78□□□□□ -0.2
HTR1AP08908 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC13.78□□□□□ -0.2
HTR1AP08908 AC009078.2-202ENST00000463353 338 ntBASIC13.78□□□□□ -0.2
HTR1AP08908 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC13.78□□□□□ -0.2
HTR1AP08908 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC13.78□□□□□ -0.2
HTR1AP08908 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC13.78□□□□□ -0.2
HTR1AP08908 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
HTR1AP08908 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
HTR1AP08908 ZNF259P1-201ENST00000407656 1365 ntBASIC13.78□□□□□ -0.2
HTR1AP08908 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
HTR1AP08908 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
HTR1AP08908 BAIAP3-202ENST00000397488 4583 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
HTR1AP08908 AC126335.2-201ENST00000623362 4637 ntBASIC13.78□□□□□ -0.2
HTR1AP08908 DAZL-201ENST00000250863 3104 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
HTR1AP08908 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
HTR1AP08908 COL6A1-207ENST00000612273 3251 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
HTR1AP08908 CERS6-202ENST00000392687 6851 ntAPPRIS ALT1 TSL 1 (best) BASIC13.78□□□□□ -0.2
HTR1AP08908 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
HTR1AP08908 HLA-DPA1-242ENST00000419277 1704 ntAPPRIS P2 BASIC13.78□□□□□ -0.2
HTR1AP08908 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
HTR1AP08908 FFAR4-201ENST00000371481 3605 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
HTR1AP08908 IGF2BP2-202ENST00000382199 3688 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
HTR1AP08908 FBXL12-201ENST00000247977 1852 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
HTR1AP08908 AGPAT3-205ENST00000398063 5767 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
HTR1AP08908 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC13.78□□□□□ -0.2
HTR1AP08908 AC007603.1-201ENST00000563124 2085 ntTSL 2 BASIC13.78□□□□□ -0.2
HTR1AP08908 EIF4G1-218ENST00000434061 5026 ntTSL 2 BASIC13.78□□□□□ -0.2
HTR1AP08908 PNPLA5-205ENST00000597664 2537 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
HTR1AP08908 EIF4G3-204ENST00000374935 5567 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.2
HTR1AP08908 SPOCK3-218ENST00000511531 2908 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.2
HTR1AP08908 PRRT2-201ENST00000300797 3002 ntTSL 2 BASIC13.77□□□□□ -0.2
HTR1AP08908 GPR4-201ENST00000323040 3048 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
HTR1AP08908 AC051649.2-201ENST00000640310 3319 ntAPPRIS P1 BASIC13.77□□□□□ -0.2
HTR1AP08908 PCDH8-201ENST00000338862 3708 ntAPPRIS ALT1 TSL 1 (best) BASIC13.77□□□□□ -0.2
HTR1AP08908 RIC1-201ENST00000251879 4127 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
HTR1AP08908 ZNF641-201ENST00000301042 4544 ntTSL 5 BASIC13.77□□□□□ -0.2
HTR1AP08908 ABCC6-208ENST00000622290 4941 ntTSL 5 BASIC13.77□□□□□ -0.2
HTR1AP08908 SBF1-202ENST00000380817 8008 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.2
HTR1AP08908 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
HTR1AP08908 MAGEA4-201ENST00000276344 1724 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
HTR1AP08908 SLC9B1-201ENST00000296422 1879 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
HTR1AP08908 TRIM25-201ENST00000316881 5734 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
HTR1AP08908 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
HTR1AP08908 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC13.77□□□□□ -0.21
HTR1AP08908 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC13.77□□□□□ -0.21
HTR1AP08908 ESPN-201ENST00000377828 3531 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
HTR1AP08908 PTMS-202ENST00000389462 773 ntTSL 2 BASIC13.77□□□□□ -0.21
HTR1AP08908 C1QTNF1-204ENST00000392445 2833 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
HTR1AP08908 NFATC2-203ENST00000414705 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
HTR1AP08908 FAM58CP-201ENST00000435741 640 ntBASIC13.77□□□□□ -0.21
HTR1AP08908 AGAP9-201ENST00000452145 2387 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
HTR1AP08908 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC13.77□□□□□ -0.21
HTR1AP08908 RPS6KA2-204ENST00000481261 2297 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
HTR1AP08908 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC13.77□□□□□ -0.21
HTR1AP08908 DCAF8L2-203ENST00000545306 2013 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
HTR1AP08908 RPL18-209ENST00000550645 463 ntTSL 5 BASIC13.77□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 70.5 ms