Protein–RNA interactions for Protein: O95475

SIX6, Homeobox protein SIX6, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX6O95475 SSBP2-220ENST00000615665 4465 ntTSL 5 BASIC12.67□□□□□ -0.38
SIX6O95475 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
SIX6O95475 RTN4-202ENST00000337526 4790 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
SIX6O95475 SEMA3F-201ENST00000002829 3802 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
SIX6O95475 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
SIX6O95475 COL2A1-201ENST00000337299 4257 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
SIX6O95475 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC12.67□□□□□ -0.38
SIX6O95475 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC12.67□□□□□ -0.38
SIX6O95475 ACTL8-202ENST00000617065 1670 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
SIX6O95475 ANKZF1-201ENST00000323348 2579 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
SIX6O95475 TFEB-205ENST00000394283 2595 ntTSL 2 BASIC12.67□□□□□ -0.38
SIX6O95475 CCDC57-202ENST00000389641 3000 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
SIX6O95475 CCDC57-206ENST00000392347 3000 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
SIX6O95475 MEGF8-201ENST00000251268 9549 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
SIX6O95475 VCP-201ENST00000358901 4370 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
SIX6O95475 CCSER2-203ENST00000372088 7657 ntTSL 2 BASIC12.67□□□□□ -0.38
SIX6O95475 XPOT-201ENST00000332707 6414 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
SIX6O95475 CDH3-201ENST00000264012 4929 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
SIX6O95475 SLC5A5-201ENST00000222248 3576 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
SIX6O95475 LRSAM1-201ENST00000300417 3146 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
SIX6O95475 CROT-203ENST00000419147 2959 ntTSL 2 BASIC12.66□□□□□ -0.38
SIX6O95475 ADD2-202ENST00000355733 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
SIX6O95475 AC007603.1-201ENST00000563124 2085 ntTSL 2 BASIC12.66□□□□□ -0.38
SIX6O95475 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
SIX6O95475 PIP4K2A-201ENST00000323883 1319 ntTSL 2 BASIC12.66□□□□□ -0.38
SIX6O95475 RNF26-201ENST00000311413 2787 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
SIX6O95475 LIPA-202ENST00000336233 2782 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
SIX6O95475 TWSG1-201ENST00000262120 3756 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
SIX6O95475 PRR30-201ENST00000335524 2008 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
SIX6O95475 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
SIX6O95475 IKZF1-205ENST00000357364 5925 ntTSL 5 BASIC12.66□□□□□ -0.38
SIX6O95475 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC12.66□□□□□ -0.38
SIX6O95475 USP40-208ENST00000450966 5616 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
SIX6O95475 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
SIX6O95475 CES1P1-201ENST00000421606 1704 ntBASIC12.66□□□□□ -0.38
SIX6O95475 MVK-214ENST00000629016 1591 ntTSL 5 BASIC12.66□□□□□ -0.38
SIX6O95475 AC025171.1-202ENST00000499871 2271 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
SIX6O95475 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC12.66□□□□□ -0.38
SIX6O95475 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
SIX6O95475 AC136604.1-201ENST00000418535 575 ntBASIC12.66□□□□□ -0.38
SIX6O95475 EEF1DP4-201ENST00000446006 880 ntBASIC12.66□□□□□ -0.38
SIX6O95475 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC12.66□□□□□ -0.38
SIX6O95475 THTPA-204ENST00000554970 569 ntTSL 4 BASIC12.66□□□□□ -0.38
SIX6O95475 THTPA-206ENST00000556015 535 ntTSL 3 BASIC12.66□□□□□ -0.38
SIX6O95475 ETFA-208ENST00000559602 792 ntTSL 3 BASIC12.66□□□□□ -0.38
SIX6O95475 BCL10-202ENST00000620248 774 ntTSL 5 BASIC12.66□□□□□ -0.38
SIX6O95475 INTS6-201ENST00000311234 3662 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
SIX6O95475 SMIM14-201ENST00000295958 6483 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
SIX6O95475 SNHG28-201ENST00000368102 2501 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
SIX6O95475 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
SIX6O95475 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC12.66□□□□□ -0.38
SIX6O95475 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
SIX6O95475 PARVB-201ENST00000338758 5429 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
SIX6O95475 GLIS3-201ENST00000324333 6667 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
SIX6O95475 GULP1-207ENST00000409843 2643 ntAPPRIS ALT1 TSL 2 BASIC12.66□□□□□ -0.38
SIX6O95475 TATDN3-201ENST00000366973 2321 ntAPPRIS ALT1 TSL 1 (best) BASIC12.66□□□□□ -0.38
SIX6O95475 SLC38A1-204ENST00000546893 2332 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
SIX6O95475 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
SIX6O95475 RAB44-202ENST00000612677 4233 ntAPPRIS P2 TSL 5 BASIC12.66□□□□□ -0.38
SIX6O95475 CBLB-204ENST00000405772 3237 ntTSL 2 BASIC12.66□□□□□ -0.38
SIX6O95475 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC12.65□□□□□ -0.38
SIX6O95475 MBP-205ENST00000397860 4844 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
SIX6O95475 ERG-207ENST00000398919 1868 ntAPPRIS ALT1 TSL 1 (best) BASIC12.65□□□□□ -0.38
SIX6O95475 SYNPO-205ENST00000522122 5098 ntAPPRIS ALT2 TSL 2 BASIC12.65□□□□□ -0.38
SIX6O95475 ADAM19-203ENST00000517905 3312 ntTSL 5 BASIC12.65□□□□□ -0.38
SIX6O95475 MOGAT3-201ENST00000223114 2132 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
SIX6O95475 HMOX2-216ENST00000613539 1703 ntTSL 5 BASIC12.65□□□□□ -0.38
SIX6O95475 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
SIX6O95475 ARID3B-206ENST00000622429 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
SIX6O95475 POLM-201ENST00000242248 2631 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
SIX6O95475 NR4A2-209ENST00000426264 2642 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
SIX6O95475 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.38
SIX6O95475 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
SIX6O95475 OS9-218ENST00000551035 2246 ntTSL 2 BASIC12.65□□□□□ -0.38
SIX6O95475 DISC1-221ENST00000620189 6689 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
SIX6O95475 USP51-201ENST00000500968 4407 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
SIX6O95475 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
SIX6O95475 RNH1-224ENST00000534797 2973 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
SIX6O95475 HNF1B-204ENST00000617811 2977 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
SIX6O95475 DSE-201ENST00000331677 7237 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
SIX6O95475 BRSK2-202ENST00000382179 3576 ntTSL 2 BASIC12.65□□□□□ -0.38
SIX6O95475 FOXP3-204ENST00000455775 2448 ntTSL 5 BASIC12.65□□□□□ -0.38
SIX6O95475 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC12.65□□□□□ -0.38
SIX6O95475 MLPH-201ENST00000264605 3823 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
SIX6O95475 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
SIX6O95475 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC12.65□□□□□ -0.38
SIX6O95475 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
SIX6O95475 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC12.65□□□□□ -0.38
SIX6O95475 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
SIX6O95475 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC12.65□□□□□ -0.38
SIX6O95475 RPS2P1-201ENST00000434010 821 ntBASIC12.65□□□□□ -0.38
SIX6O95475 NME4-207ENST00000450036 985 ntTSL 3 BASIC12.65□□□□□ -0.38
SIX6O95475 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC12.65□□□□□ -0.38
SIX6O95475 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
SIX6O95475 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC12.65□□□□□ -0.38
SIX6O95475 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC12.65□□□□□ -0.38
SIX6O95475 AC092119.3-201ENST00000612618 583 ntBASIC12.65□□□□□ -0.38
SIX6O95475 NPAP1P7-201ENST00000613027 823 ntBASIC12.65□□□□□ -0.38
SIX6O95475 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
SIX6O95475 ANKEF1-201ENST00000378380 5303 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms