Protein–RNA interactions for Protein: O95096

NKX2-2, Homeobox protein Nkx-2.2, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-2O95096 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
NKX2-2O95096 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
NKX2-2O95096 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC13.87□□□□□ -0.19
NKX2-2O95096 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC13.87□□□□□ -0.19
NKX2-2O95096 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
NKX2-2O95096 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
NKX2-2O95096 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
NKX2-2O95096 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC13.87□□□□□ -0.19
NKX2-2O95096 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
NKX2-2O95096 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
NKX2-2O95096 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC13.87□□□□□ -0.19
NKX2-2O95096 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
NKX2-2O95096 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
NKX2-2O95096 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
NKX2-2O95096 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
NKX2-2O95096 TMEM14DP-201ENST00000422205 345 ntBASIC13.87□□□□□ -0.19
NKX2-2O95096 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC13.87□□□□□ -0.19
NKX2-2O95096 NME2P1-201ENST00000426182 414 ntBASIC13.87□□□□□ -0.19
NKX2-2O95096 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
NKX2-2O95096 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
NKX2-2O95096 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC13.87□□□□□ -0.19
NKX2-2O95096 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
NKX2-2O95096 AC131206.1-201ENST00000538078 1211 ntBASIC13.87□□□□□ -0.19
NKX2-2O95096 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
NKX2-2O95096 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
NKX2-2O95096 BTNL10-201ENST00000595971 695 ntBASIC13.87□□□□□ -0.19
NKX2-2O95096 AC138696.2-201ENST00000607376 223 ntBASIC13.87□□□□□ -0.19
NKX2-2O95096 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC13.87□□□□□ -0.19
NKX2-2O95096 CECR7-204ENST00000609932 568 ntTSL 2 BASIC13.87□□□□□ -0.19
NKX2-2O95096 AL022328.1-201ENST00000610050 478 ntBASIC13.87□□□□□ -0.19
NKX2-2O95096 ETV2-208ENST00000621247 941 ntTSL 5 BASIC13.87□□□□□ -0.19
NKX2-2O95096 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
NKX2-2O95096 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
NKX2-2O95096 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
NKX2-2O95096 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
NKX2-2O95096 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
NKX2-2O95096 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC13.87□□□□□ -0.19
NKX2-2O95096 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC13.87□□□□□ -0.19
NKX2-2O95096 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
NKX2-2O95096 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC13.87□□□□□ -0.19
NKX2-2O95096 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC13.87□□□□□ -0.19
NKX2-2O95096 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
NKX2-2O95096 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
NKX2-2O95096 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
NKX2-2O95096 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
NKX2-2O95096 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
NKX2-2O95096 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
NKX2-2O95096 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
NKX2-2O95096 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC13.87□□□□□ -0.19
NKX2-2O95096 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
NKX2-2O95096 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
NKX2-2O95096 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC13.86□□□□□ -0.19
NKX2-2O95096 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
NKX2-2O95096 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
NKX2-2O95096 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
NKX2-2O95096 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
NKX2-2O95096 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC13.86□□□□□ -0.19
NKX2-2O95096 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
NKX2-2O95096 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
NKX2-2O95096 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC13.86□□□□□ -0.19
NKX2-2O95096 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC13.86□□□□□ -0.19
NKX2-2O95096 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
NKX2-2O95096 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
NKX2-2O95096 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC13.86□□□□□ -0.19
NKX2-2O95096 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
NKX2-2O95096 INTS4P1-203ENST00000641008 3683 ntBASIC13.86□□□□□ -0.19
NKX2-2O95096 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
NKX2-2O95096 GRAP-202ENST00000395635 834 ntTSL 2 BASIC13.86□□□□□ -0.19
NKX2-2O95096 AL035633.1-201ENST00000406139 838 ntBASIC13.86□□□□□ -0.19
NKX2-2O95096 C17orf51-202ENST00000412778 877 ntAPPRIS ALT2 TSL 3 BASIC13.86□□□□□ -0.19
NKX2-2O95096 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
NKX2-2O95096 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC13.86□□□□□ -0.19
NKX2-2O95096 BCRP2-202ENST00000447763 634 ntBASIC13.86□□□□□ -0.19
NKX2-2O95096 COX20P2-201ENST00000452636 358 ntBASIC13.86□□□□□ -0.19
NKX2-2O95096 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC13.86□□□□□ -0.19
NKX2-2O95096 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC13.86□□□□□ -0.19
NKX2-2O95096 FTLP10-202ENST00000505798 471 ntBASIC13.86□□□□□ -0.19
NKX2-2O95096 BCRP6-201ENST00000510112 632 ntBASIC13.86□□□□□ -0.19
NKX2-2O95096 BCRP7-201ENST00000511549 544 ntBASIC13.86□□□□□ -0.19
NKX2-2O95096 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC13.86□□□□□ -0.19
NKX2-2O95096 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC13.86□□□□□ -0.19
NKX2-2O95096 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC13.86□□□□□ -0.19
NKX2-2O95096 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC13.86□□□□□ -0.19
NKX2-2O95096 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
NKX2-2O95096 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC13.86□□□□□ -0.19
NKX2-2O95096 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC13.86□□□□□ -0.19
NKX2-2O95096 AC007191.1-201ENST00000623179 2995 ntBASIC13.86□□□□□ -0.19
NKX2-2O95096 AC044839.1-204ENST00000634777 1058 ntTSL 5 BASIC13.86□□□□□ -0.19
NKX2-2O95096 AC105233.6-201ENST00000642093 218 ntBASIC13.86□□□□□ -0.19
NKX2-2O95096 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
NKX2-2O95096 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
NKX2-2O95096 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
NKX2-2O95096 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
NKX2-2O95096 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
NKX2-2O95096 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
NKX2-2O95096 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC13.86□□□□□ -0.19
NKX2-2O95096 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC13.86□□□□□ -0.19
NKX2-2O95096 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
NKX2-2O95096 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
NKX2-2O95096 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 64.5 ms