Protein–RNA interactions for Protein: O60716

CTNND1, Catenin delta-1, humanhuman

Known RBP Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1O60716 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC17.49■□□□□ 0.39
CTNND1O60716 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CTNND1O60716 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
CTNND1O60716 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC17.49■□□□□ 0.39
CTNND1O60716 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CTNND1O60716 ALG1L-201ENST00000340333 805 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
CTNND1O60716 ANKDD1A-203ENST00000395723 1250 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CTNND1O60716 AC083949.1-201ENST00000422013 657 ntTSL 3 BASIC17.49■□□□□ 0.39
CTNND1O60716 AP000356.1-201ENST00000438893 364 ntTSL 3 BASIC17.49■□□□□ 0.39
CTNND1O60716 PGAP2-224ENST00000490830 810 ntTSL 3 BASIC17.49■□□□□ 0.39
CTNND1O60716 AC008406.1-201ENST00000509530 541 ntTSL 3 BASIC17.49■□□□□ 0.39
CTNND1O60716 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CTNND1O60716 AC015689.1-201ENST00000525365 462 ntTSL 2 BASIC17.49■□□□□ 0.39
CTNND1O60716 MT1H-202ENST00000569155 697 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CTNND1O60716 AC127024.2-201ENST00000581019 789 ntTSL 5 BASIC17.49■□□□□ 0.39
CTNND1O60716 AC009884.2-201ENST00000603110 324 ntBASIC17.49■□□□□ 0.39
CTNND1O60716 BX088702.1-201ENST00000610784 235 ntBASIC17.49■□□□□ 0.39
CTNND1O60716 ALG1L-202ENST00000611639 701 ntAPPRIS ALT2 TSL 3 BASIC17.49■□□□□ 0.39
CTNND1O60716 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
CTNND1O60716 Z98259.2-201ENST00000641583 609 ntBASIC17.49■□□□□ 0.39
CTNND1O60716 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CTNND1O60716 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CTNND1O60716 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CTNND1O60716 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CTNND1O60716 ASB3-202ENST00000394717 1734 ntTSL 2 BASIC17.49■□□□□ 0.39
CTNND1O60716 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC17.49■□□□□ 0.39
CTNND1O60716 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC17.49■□□□□ 0.39
CTNND1O60716 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
CTNND1O60716 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CTNND1O60716 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC17.49■□□□□ 0.39
CTNND1O60716 STRN-202ENST00000379213 2254 ntTSL 5 BASIC17.49■□□□□ 0.39
CTNND1O60716 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
CTNND1O60716 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC17.49■□□□□ 0.39
CTNND1O60716 UBXN11-207ENST00000374223 1312 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CTNND1O60716 CALCR-203ENST00000394441 1774 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
CTNND1O60716 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
CTNND1O60716 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CTNND1O60716 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC17.48■□□□□ 0.39
CTNND1O60716 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
CTNND1O60716 AL365203.3-201ENST00000609742 2057 ntBASIC17.48■□□□□ 0.39
CTNND1O60716 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC17.48■□□□□ 0.39
CTNND1O60716 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC17.48■□□□□ 0.39
CTNND1O60716 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC17.48■□□□□ 0.39
CTNND1O60716 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CTNND1O60716 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CTNND1O60716 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC17.48■□□□□ 0.39
CTNND1O60716 CELA3B-201ENST00000337107 897 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CTNND1O60716 RPL35-201ENST00000348462 455 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CTNND1O60716 EDF1-202ENST00000371648 809 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CTNND1O60716 UFM1-202ENST00000379649 846 ntTSL 4 BASIC17.48■□□□□ 0.39
CTNND1O60716 SERPINE3-201ENST00000400389 1218 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CTNND1O60716 OSM-202ENST00000403389 1000 ntAPPRIS ALT2 TSL 3 BASIC17.48■□□□□ 0.39
CTNND1O60716 DMAC2-203ENST00000417807 1065 ntTSL 2 BASIC17.48■□□□□ 0.39
CTNND1O60716 AL391832.2-201ENST00000418557 889 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CTNND1O60716 LINC00642-202ENST00000442515 670 ntTSL 3 BASIC17.48■□□□□ 0.39
CTNND1O60716 GLIS3-AS1-201ENST00000451340 734 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CTNND1O60716 AL139010.1-202ENST00000452528 1041 ntTSL 2 BASIC17.48■□□□□ 0.39
CTNND1O60716 SCARNA21-201ENST00000517026 139 ntBASIC17.48■□□□□ 0.39
CTNND1O60716 FADS2-212ENST00000522639 360 ntTSL 5 BASIC17.48■□□□□ 0.39
CTNND1O60716 AC090857.1-201ENST00000527400 390 ntBASIC17.48■□□□□ 0.39
CTNND1O60716 SNHG14-213ENST00000551077 638 ntTSL 5 BASIC17.48■□□□□ 0.39
CTNND1O60716 FADS2-215ENST00000574708 385 ntTSL 3 BASIC17.48■□□□□ 0.39
CTNND1O60716 AC011825.3-201ENST00000583184 565 ntTSL 5 BASIC17.48■□□□□ 0.39
CTNND1O60716 AC090386.1-202ENST00000586610 469 ntTSL 3 BASIC17.48■□□□□ 0.39
CTNND1O60716 AC011498.6-201ENST00000592034 510 ntTSL 5 BASIC17.48■□□□□ 0.39
CTNND1O60716 SRD5A3-AS1-211ENST00000599135 737 ntTSL 5 BASIC17.48■□□□□ 0.39
CTNND1O60716 AC006064.4-201ENST00000602946 422 ntTSL 2 BASIC17.48■□□□□ 0.39
CTNND1O60716 RPL35-206ENST00000629845 340 ntTSL 5 BASIC17.48■□□□□ 0.39
CTNND1O60716 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CTNND1O60716 MPZL2-202ENST00000438295 1370 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CTNND1O60716 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC17.48■□□□□ 0.39
CTNND1O60716 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
CTNND1O60716 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CTNND1O60716 ATP6V0E2-207ENST00000479613 1666 ntTSL 2 BASIC17.48■□□□□ 0.39
CTNND1O60716 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
CTNND1O60716 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC17.48■□□□□ 0.39
CTNND1O60716 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CTNND1O60716 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CTNND1O60716 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
CTNND1O60716 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CTNND1O60716 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CTNND1O60716 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CTNND1O60716 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
CTNND1O60716 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC17.47■□□□□ 0.39
CTNND1O60716 CTSW-204ENST00000528419 1341 ntTSL 2 BASIC17.47■□□□□ 0.39
CTNND1O60716 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CTNND1O60716 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC17.47■□□□□ 0.39
CTNND1O60716 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
CTNND1O60716 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
CTNND1O60716 AMT-204ENST00000427987 1646 ntTSL 5 BASIC17.47■□□□□ 0.39
CTNND1O60716 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC17.47■□□□□ 0.39
CTNND1O60716 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC17.47■□□□□ 0.39
CTNND1O60716 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CTNND1O60716 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
CTNND1O60716 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CTNND1O60716 TMEM40-201ENST00000264728 984 ntAPPRIS P3 TSL 2 BASIC17.47■□□□□ 0.39
CTNND1O60716 COX8C-201ENST00000342144 533 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CTNND1O60716 NUDT1-203ENST00000356714 662 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CTNND1O60716 NUDT1-204ENST00000397046 712 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CTNND1O60716 AL136361.1-201ENST00000435429 506 ntTSL 3 BASIC17.47■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 81.2 ms