Protein–RNA interactions for Protein: A6NKF7

TMEM88B, Transmembrane protein 88B, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88BA6NKF7 HVCN1-203ENST00000439744 1215 ntTSL 2 BASIC17.09■□□□□ 0.33
TMEM88BA6NKF7 CSAG1-204ENST00000452779 627 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
TMEM88BA6NKF7 LINC00892-203ENST00000454385 686 ntTSL 3 BASIC17.09■□□□□ 0.33
TMEM88BA6NKF7 AC128689.1-202ENST00000459861 827 ntTSL 3 BASIC17.09■□□□□ 0.33
TMEM88BA6NKF7 RN7SL277P-201ENST00000481521 288 ntBASIC17.09■□□□□ 0.33
TMEM88BA6NKF7 NDUFA3-214ENST00000485876 963 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TMEM88BA6NKF7 IKBKB-223ENST00000522147 954 ntTSL 5 BASIC17.09■□□□□ 0.33
TMEM88BA6NKF7 ADM-203ENST00000525063 867 ntAPPRIS P1 TSL 3 BASIC17.09■□□□□ 0.33
TMEM88BA6NKF7 C11orf58-207ENST00000525684 575 ntTSL 2 BASIC17.09■□□□□ 0.33
TMEM88BA6NKF7 C11orf58-209ENST00000528634 776 ntTSL 5 BASIC17.09■□□□□ 0.33
TMEM88BA6NKF7 RPL18-205ENST00000549273 1036 ntTSL 2 BASIC17.09■□□□□ 0.33
TMEM88BA6NKF7 LINC02285-201ENST00000557121 943 ntTSL 2 BASIC17.09■□□□□ 0.33
TMEM88BA6NKF7 CDIPT-AS1-202ENST00000565014 729 ntTSL 2 BASIC17.09■□□□□ 0.33
TMEM88BA6NKF7 IGHV3OR16-12-201ENST00000570121 353 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
TMEM88BA6NKF7 HNRNPA1P16-201ENST00000575692 955 ntBASIC17.09■□□□□ 0.33
TMEM88BA6NKF7 RBFOX3-206ENST00000582043 1143 ntTSL 5 BASIC17.09■□□□□ 0.33
TMEM88BA6NKF7 NMRK2-202ENST00000593949 869 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
TMEM88BA6NKF7 NMRK2-204ENST00000599576 691 ntTSL 3 BASIC17.09■□□□□ 0.33
TMEM88BA6NKF7 CTSH-218ENST00000615999 972 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
TMEM88BA6NKF7 AC012183.1-201ENST00000625197 499 ntBASIC17.09■□□□□ 0.33
TMEM88BA6NKF7 GNG14-201ENST00000640117 210 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
TMEM88BA6NKF7 TPM4-202ENST00000344824 1417 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
TMEM88BA6NKF7 PGAP2-227ENST00000496834 1530 ntTSL 2 BASIC17.09■□□□□ 0.33
TMEM88BA6NKF7 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
TMEM88BA6NKF7 SGCE-202ENST00000415788 1871 ntTSL 2 BASIC17.09■□□□□ 0.33
TMEM88BA6NKF7 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
TMEM88BA6NKF7 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TMEM88BA6NKF7 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TMEM88BA6NKF7 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC17.09■□□□□ 0.33
TMEM88BA6NKF7 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TMEM88BA6NKF7 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
TMEM88BA6NKF7 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
TMEM88BA6NKF7 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC17.08■□□□□ 0.33
TMEM88BA6NKF7 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
TMEM88BA6NKF7 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
TMEM88BA6NKF7 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC17.08■□□□□ 0.33
TMEM88BA6NKF7 REXO1L2P-201ENST00000425429 2069 ntBASIC17.08■□□□□ 0.33
TMEM88BA6NKF7 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
TMEM88BA6NKF7 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.33
TMEM88BA6NKF7 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC17.08■□□□□ 0.33
TMEM88BA6NKF7 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
TMEM88BA6NKF7 AC012508.2-201ENST00000567613 1472 ntBASIC17.08■□□□□ 0.32
TMEM88BA6NKF7 PPM1L-201ENST00000295839 1449 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
TMEM88BA6NKF7 WASH3P-207ENST00000560956 1394 ntBASIC17.08■□□□□ 0.32
TMEM88BA6NKF7 UPK1A-203ENST00000616789 1366 ntTSL 5 BASIC17.08■□□□□ 0.32
TMEM88BA6NKF7 PRMT2-216ENST00000621201 1301 ntTSL 5 BASIC17.08■□□□□ 0.32
TMEM88BA6NKF7 LEMD1-205ENST00000367154 786 ntTSL 2 BASIC17.08■□□□□ 0.32
TMEM88BA6NKF7 RPL10-202ENST00000369817 1284 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
TMEM88BA6NKF7 AP000354.1-201ENST00000396982 456 ntBASIC17.08■□□□□ 0.32
TMEM88BA6NKF7 ATP6V1E1-202ENST00000399796 1208 ntTSL 2 BASIC17.08■□□□□ 0.32
TMEM88BA6NKF7 AL663074.1-201ENST00000436642 299 ntTSL 3 BASIC17.08■□□□□ 0.32
TMEM88BA6NKF7 AL355376.1-201ENST00000456082 517 ntTSL 3 BASIC17.08■□□□□ 0.32
TMEM88BA6NKF7 GLUD1P3-201ENST00000507952 896 ntTSL 2 BASIC17.08■□□□□ 0.32
TMEM88BA6NKF7 AC011383.1-201ENST00000517474 617 ntTSL 3 BASIC17.08■□□□□ 0.32
TMEM88BA6NKF7 APOPT1-215ENST00000556253 783 ntTSL 3 BASIC17.08■□□□□ 0.32
TMEM88BA6NKF7 IFI27L1-212ENST00000557218 413 ntTSL 3 BASIC17.08■□□□□ 0.32
TMEM88BA6NKF7 AC092073.1-202ENST00000606020 653 ntTSL 3 BASIC17.08■□□□□ 0.32
TMEM88BA6NKF7 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TMEM88BA6NKF7 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
TMEM88BA6NKF7 TRMT10B-207ENST00000537911 2108 ntTSL 2 BASIC17.08■□□□□ 0.32
TMEM88BA6NKF7 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
TMEM88BA6NKF7 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
TMEM88BA6NKF7 AL353803.2-201ENST00000436510 1846 ntTSL 5 BASIC17.07■□□□□ 0.32
TMEM88BA6NKF7 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
TMEM88BA6NKF7 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC17.07■□□□□ 0.32
TMEM88BA6NKF7 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
TMEM88BA6NKF7 SERPINA1-209ENST00000449399 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TMEM88BA6NKF7 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
TMEM88BA6NKF7 PPHLN1-223ENST00000610488 1521 ntTSL 5 BASIC17.07■□□□□ 0.32
TMEM88BA6NKF7 COLQ-202ENST00000383786 1482 ntTSL 5 BASIC17.07■□□□□ 0.32
TMEM88BA6NKF7 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
TMEM88BA6NKF7 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
TMEM88BA6NKF7 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
TMEM88BA6NKF7 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC17.07■□□□□ 0.32
TMEM88BA6NKF7 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
TMEM88BA6NKF7 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC17.07■□□□□ 0.32
TMEM88BA6NKF7 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TMEM88BA6NKF7 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TMEM88BA6NKF7 DLK1-201ENST00000331224 1324 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
TMEM88BA6NKF7 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
TMEM88BA6NKF7 HHLA3-202ENST00000361764 692 ntAPPRIS P3 TSL 2 BASIC17.07■□□□□ 0.32
TMEM88BA6NKF7 PTTG1IP-202ENST00000397886 755 ntTSL 4 BASIC17.07■□□□□ 0.32
TMEM88BA6NKF7 AL009181.1-201ENST00000418471 1085 ntTSL 5 BASIC17.07■□□□□ 0.32
TMEM88BA6NKF7 KRT8P30-201ENST00000432100 650 ntBASIC17.07■□□□□ 0.32
TMEM88BA6NKF7 IGKV1OR-2-201ENST00000457995 350 ntBASIC17.07■□□□□ 0.32
TMEM88BA6NKF7 SCARNA12-201ENST00000459155 270 ntBASIC17.07■□□□□ 0.32
TMEM88BA6NKF7 FOXN3-AS2-201ENST00000554071 1262 ntBASIC17.07■□□□□ 0.32
TMEM88BA6NKF7 MT2A-202ENST00000561491 581 ntTSL 2 BASIC17.07■□□□□ 0.32
TMEM88BA6NKF7 AC017033.1-201ENST00000603720 708 ntTSL 2 BASIC17.07■□□□□ 0.32
TMEM88BA6NKF7 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
TMEM88BA6NKF7 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
TMEM88BA6NKF7 CCDC43-203ENST00000588210 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TMEM88BA6NKF7 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
TMEM88BA6NKF7 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
TMEM88BA6NKF7 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TMEM88BA6NKF7 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
TMEM88BA6NKF7 REXO1L4P-201ENST00000605109 1937 ntBASIC17.07■□□□□ 0.32
TMEM88BA6NKF7 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
TMEM88BA6NKF7 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TMEM88BA6NKF7 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 74.9 ms