Protein–RNA interactions for Protein: A0PJX4

SHISA3, Protein shisa-3 homolog, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3A0PJX4 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
SHISA3A0PJX4 PAK1-201ENST00000278568 2543 ntTSL 2 BASIC13.15□□□□□ -0.3
SHISA3A0PJX4 AC002407.1-201ENST00000636668 3863 ntTSL 5 BASIC13.15□□□□□ -0.3
SHISA3A0PJX4 FLII-201ENST00000327031 4338 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
SHISA3A0PJX4 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
SHISA3A0PJX4 TUNAR-201ENST00000503525 3197 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
SHISA3A0PJX4 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
SHISA3A0PJX4 ENG-204ENST00000480266 2804 ntAPPRIS ALT2 TSL 2 BASIC13.15□□□□□ -0.3
SHISA3A0PJX4 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
SHISA3A0PJX4 CRELD1-202ENST00000383811 2696 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
SHISA3A0PJX4 CLEC18B-204ENST00000617101 2321 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
SHISA3A0PJX4 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
SHISA3A0PJX4 CEP295NL-205ENST00000619342 1866 ntTSL 5 BASIC13.14□□□□□ -0.31
SHISA3A0PJX4 ARID3B-201ENST00000346246 4271 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
SHISA3A0PJX4 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
SHISA3A0PJX4 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
SHISA3A0PJX4 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
SHISA3A0PJX4 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
SHISA3A0PJX4 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
SHISA3A0PJX4 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
SHISA3A0PJX4 INSC-208ENST00000530161 1702 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
SHISA3A0PJX4 WARS-203ENST00000358655 2466 ntTSL 2 BASIC13.14□□□□□ -0.31
SHISA3A0PJX4 DDC-213ENST00000617822 1809 ntTSL 3 BASIC13.14□□□□□ -0.31
SHISA3A0PJX4 CCT7-201ENST00000258091 1916 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
SHISA3A0PJX4 MEAF6-203ENST00000373074 2005 ntTSL 2 BASIC13.14□□□□□ -0.31
SHISA3A0PJX4 MX1-202ENST00000398598 2850 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
SHISA3A0PJX4 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
SHISA3A0PJX4 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
SHISA3A0PJX4 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
SHISA3A0PJX4 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
SHISA3A0PJX4 FAM58DP-201ENST00000428076 619 ntBASIC13.14□□□□□ -0.31
SHISA3A0PJX4 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC13.14□□□□□ -0.31
SHISA3A0PJX4 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC13.14□□□□□ -0.31
SHISA3A0PJX4 RNA5SP416-201ENST00000516838 111 ntBASIC13.14□□□□□ -0.31
SHISA3A0PJX4 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC13.14□□□□□ -0.31
SHISA3A0PJX4 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC13.14□□□□□ -0.31
SHISA3A0PJX4 AC026150.2-201ENST00000564693 1156 ntBASIC13.14□□□□□ -0.31
SHISA3A0PJX4 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC13.14□□□□□ -0.31
SHISA3A0PJX4 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
SHISA3A0PJX4 AC003101.2-201ENST00000612557 442 ntBASIC13.14□□□□□ -0.31
SHISA3A0PJX4 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
SHISA3A0PJX4 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC13.14□□□□□ -0.31
SHISA3A0PJX4 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
SHISA3A0PJX4 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
SHISA3A0PJX4 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
SHISA3A0PJX4 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC13.14□□□□□ -0.31
SHISA3A0PJX4 ATE1-201ENST00000224652 4930 ntAPPRIS P5 TSL 1 (best) BASIC13.14□□□□□ -0.31
SHISA3A0PJX4 ALDH3A1-201ENST00000225740 1779 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
SHISA3A0PJX4 AGPAT1-205ENST00000395497 2168 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
SHISA3A0PJX4 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
SHISA3A0PJX4 SP6-202ENST00000536300 3848 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
SHISA3A0PJX4 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC13.14□□□□□ -0.31
SHISA3A0PJX4 ELL-201ENST00000262809 4027 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
SHISA3A0PJX4 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
SHISA3A0PJX4 PSIP1-203ENST00000380733 3391 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
SHISA3A0PJX4 STXBP1-201ENST00000373299 3765 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
SHISA3A0PJX4 SYN2-205ENST00000620175 3871 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
SHISA3A0PJX4 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
SHISA3A0PJX4 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC13.13□□□□□ -0.31
SHISA3A0PJX4 IL3RA-201ENST00000331035 1706 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
SHISA3A0PJX4 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC13.13□□□□□ -0.31
SHISA3A0PJX4 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
SHISA3A0PJX4 TMPRSS6-203ENST00000406725 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
SHISA3A0PJX4 UBE3A-209ENST00000625778 3217 ntTSL 5 BASIC13.13□□□□□ -0.31
SHISA3A0PJX4 FOXF1-201ENST00000262426 3516 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
SHISA3A0PJX4 GRIN1-203ENST00000371550 3940 ntTSL 5 BASIC13.13□□□□□ -0.31
SHISA3A0PJX4 GRIN2C-201ENST00000293190 4261 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
SHISA3A0PJX4 SLC52A1-203ENST00000512825 2989 ntTSL 2 BASIC13.13□□□□□ -0.31
SHISA3A0PJX4 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC13.13□□□□□ -0.31
SHISA3A0PJX4 AFAP1-203ENST00000382543 2590 ntAPPRIS ALT1 TSL 5 BASIC13.13□□□□□ -0.31
SHISA3A0PJX4 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
SHISA3A0PJX4 AL139193.2-201ENST00000553712 1954 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
SHISA3A0PJX4 ADAM17-204ENST00000618923 1881 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
SHISA3A0PJX4 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC13.13□□□□□ -0.31
SHISA3A0PJX4 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
SHISA3A0PJX4 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
SHISA3A0PJX4 TEX30-205ENST00000376029 959 ntTSL 2 BASIC13.13□□□□□ -0.31
SHISA3A0PJX4 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
SHISA3A0PJX4 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC13.13□□□□□ -0.31
SHISA3A0PJX4 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
SHISA3A0PJX4 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC13.13□□□□□ -0.31
SHISA3A0PJX4 MTND6P24-201ENST00000440466 518 ntBASIC13.13□□□□□ -0.31
SHISA3A0PJX4 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC13.13□□□□□ -0.31
SHISA3A0PJX4 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
SHISA3A0PJX4 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC13.13□□□□□ -0.31
SHISA3A0PJX4 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC13.13□□□□□ -0.31
SHISA3A0PJX4 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC13.13□□□□□ -0.31
SHISA3A0PJX4 GATD1-206ENST00000526325 756 ntTSL 5 BASIC13.13□□□□□ -0.31
SHISA3A0PJX4 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC13.13□□□□□ -0.31
SHISA3A0PJX4 AL079307.3-201ENST00000556114 283 ntBASIC13.13□□□□□ -0.31
SHISA3A0PJX4 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC13.13□□□□□ -0.31
SHISA3A0PJX4 AC140113.2-201ENST00000604370 208 ntBASIC13.13□□□□□ -0.31
SHISA3A0PJX4 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC13.13□□□□□ -0.31
SHISA3A0PJX4 DEK-202ENST00000397239 3427 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
SHISA3A0PJX4 DNAJC3-AS1-201ENST00000499499 2908 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
SHISA3A0PJX4 CENPO-202ENST00000380834 4386 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
SHISA3A0PJX4 NAA60-203ENST00000414063 2619 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
SHISA3A0PJX4 CPNE5-202ENST00000393189 2542 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
SHISA3A0PJX4 GNPNAT1-203ENST00000554230 2238 ntTSL 5 BASIC13.13□□□□□ -0.31
SHISA3A0PJX4 GLB1L3-201ENST00000389887 3566 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 50.4 ms