Protein–RNA interactions for Protein: Q9Y3P4

RHBDD3, Rhomboid domain-containing protein 3, humanhuman

Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3Q9Y3P4 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
RHBDD3Q9Y3P4 TMCC2-202ENST00000330675 2780 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
RHBDD3Q9Y3P4 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
RHBDD3Q9Y3P4 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC13.28□□□□□ -0.28
RHBDD3Q9Y3P4 ARMC5-202ENST00000408912 3626 ntAPPRIS ALT2 TSL 2 BASIC13.28□□□□□ -0.28
RHBDD3Q9Y3P4 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC13.28□□□□□ -0.28
RHBDD3Q9Y3P4 DLGAP1-204ENST00000400149 5203 ntTSL 5 BASIC13.28□□□□□ -0.28
RHBDD3Q9Y3P4 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
RHBDD3Q9Y3P4 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC13.28□□□□□ -0.28
RHBDD3Q9Y3P4 ANKRD18A-201ENST00000399703 4041 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
RHBDD3Q9Y3P4 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC13.28□□□□□ -0.28
RHBDD3Q9Y3P4 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC13.28□□□□□ -0.28
RHBDD3Q9Y3P4 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC13.28□□□□□ -0.28
RHBDD3Q9Y3P4 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
RHBDD3Q9Y3P4 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
RHBDD3Q9Y3P4 C20orf166-AS1-203ENST00000475015 2585 ntTSL 2 BASIC13.27□□□□□ -0.28
RHBDD3Q9Y3P4 RNF182-208ENST00000544682 3495 ntAPPRIS P1 TSL 4 BASIC13.27□□□□□ -0.28
RHBDD3Q9Y3P4 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
RHBDD3Q9Y3P4 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
RHBDD3Q9Y3P4 GPANK1-205ENST00000375906 2793 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.28
RHBDD3Q9Y3P4 DACH1-204ENST00000620444 4627 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.28
RHBDD3Q9Y3P4 LATS1-207ENST00000543571 7517 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
RHBDD3Q9Y3P4 AMIGO2-201ENST00000266581 3763 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
RHBDD3Q9Y3P4 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
RHBDD3Q9Y3P4 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.28
RHBDD3Q9Y3P4 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC13.27□□□□□ -0.28
RHBDD3Q9Y3P4 SIGLEC9-202ENST00000440804 1960 ntAPPRIS ALT2 TSL 2 BASIC13.27□□□□□ -0.28
RHBDD3Q9Y3P4 ZMYM3-206ENST00000373988 6021 ntAPPRIS ALT1 TSL 5 BASIC13.27□□□□□ -0.28
RHBDD3Q9Y3P4 POMT1-204ENST00000402686 3038 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
RHBDD3Q9Y3P4 UBE3A-220ENST00000630424 5075 ntAPPRIS P3 TSL 5 BASIC13.27□□□□□ -0.28
RHBDD3Q9Y3P4 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
RHBDD3Q9Y3P4 AC018442.1-201ENST00000421439 2061 ntBASIC13.27□□□□□ -0.28
RHBDD3Q9Y3P4 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
RHBDD3Q9Y3P4 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.28
RHBDD3Q9Y3P4 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
RHBDD3Q9Y3P4 R3HDM2P2-201ENST00000401880 2116 ntBASIC13.27□□□□□ -0.28
RHBDD3Q9Y3P4 COL1A2-201ENST00000297268 5411 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
RHBDD3Q9Y3P4 TRMT1-201ENST00000221504 2179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
RHBDD3Q9Y3P4 SLC34A2-203ENST00000504570 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
RHBDD3Q9Y3P4 WSCD2-206ENST00000547525 4481 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
RHBDD3Q9Y3P4 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
RHBDD3Q9Y3P4 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
RHBDD3Q9Y3P4 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC13.27□□□□□ -0.29
RHBDD3Q9Y3P4 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC13.27□□□□□ -0.29
RHBDD3Q9Y3P4 PMS2P2-201ENST00000425039 1128 ntBASIC13.27□□□□□ -0.29
RHBDD3Q9Y3P4 RASL12-203ENST00000434605 982 ntTSL 2 BASIC13.27□□□□□ -0.29
RHBDD3Q9Y3P4 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC13.27□□□□□ -0.29
RHBDD3Q9Y3P4 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC13.27□□□□□ -0.29
RHBDD3Q9Y3P4 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC13.27□□□□□ -0.29
RHBDD3Q9Y3P4 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
RHBDD3Q9Y3P4 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC13.27□□□□□ -0.29
RHBDD3Q9Y3P4 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC13.27□□□□□ -0.29
RHBDD3Q9Y3P4 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC13.27□□□□□ -0.29
RHBDD3Q9Y3P4 AC005498.2-205ENST00000593218 784 ntBASIC13.27□□□□□ -0.29
RHBDD3Q9Y3P4 AL158212.4-201ENST00000624062 1286 ntBASIC13.27□□□□□ -0.29
RHBDD3Q9Y3P4 ACIN1-203ENST00000357481 2563 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
RHBDD3Q9Y3P4 PAPSS2-201ENST00000361175 3949 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
RHBDD3Q9Y3P4 IL21R-AS1-201ENST00000563191 2615 ntTSL 2 BASIC13.27□□□□□ -0.29
RHBDD3Q9Y3P4 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC13.27□□□□□ -0.29
RHBDD3Q9Y3P4 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
RHBDD3Q9Y3P4 RERG-209ENST00000546331 1383 ntTSL 2 BASIC13.27□□□□□ -0.29
RHBDD3Q9Y3P4 MBD6-201ENST00000355673 4282 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
RHBDD3Q9Y3P4 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC13.27□□□□□ -0.29
RHBDD3Q9Y3P4 GPSM2-202ENST00000406462 7433 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
RHBDD3Q9Y3P4 RNF150-201ENST00000306799 4535 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
RHBDD3Q9Y3P4 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.29
RHBDD3Q9Y3P4 RP1L1-202ENST00000382483 7973 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
RHBDD3Q9Y3P4 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
RHBDD3Q9Y3P4 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
RHBDD3Q9Y3P4 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC13.27□□□□□ -0.29
RHBDD3Q9Y3P4 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC13.27□□□□□ -0.29
RHBDD3Q9Y3P4 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
RHBDD3Q9Y3P4 IRAK1-203ENST00000369980 3666 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
RHBDD3Q9Y3P4 MLLT11-201ENST00000368921 4075 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
RHBDD3Q9Y3P4 NFATC3-203ENST00000349223 6328 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
RHBDD3Q9Y3P4 UNQ6494-202ENST00000617436 2163 ntTSL 2 BASIC13.27□□□□□ -0.29
RHBDD3Q9Y3P4 CFLAR-206ENST00000395148 4415 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
RHBDD3Q9Y3P4 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC13.27□□□□□ -0.29
RHBDD3Q9Y3P4 UBAP1-202ENST00000359544 2535 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
RHBDD3Q9Y3P4 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
RHBDD3Q9Y3P4 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC13.26□□□□□ -0.29
RHBDD3Q9Y3P4 RPS6KL1-210ENST00000555647 3309 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
RHBDD3Q9Y3P4 TJP3-202ENST00000541714 3350 ntAPPRIS P3 TSL 2 BASIC13.26□□□□□ -0.29
RHBDD3Q9Y3P4 ARHGAP6-204ENST00000380718 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
RHBDD3Q9Y3P4 NEDD4L-205ENST00000400345 3647 ntAPPRIS P4 TSL 1 (best) BASIC13.26□□□□□ -0.29
RHBDD3Q9Y3P4 ASTN2-206ENST00000361477 4001 ntTSL 5 BASIC13.26□□□□□ -0.29
RHBDD3Q9Y3P4 INPPL1-213ENST00000541756 4649 ntTSL 5 BASIC13.26□□□□□ -0.29
RHBDD3Q9Y3P4 MAPK4-201ENST00000400384 4770 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
RHBDD3Q9Y3P4 ADAMTS7P1-201ENST00000613213 4793 ntBASIC13.26□□□□□ -0.29
RHBDD3Q9Y3P4 TNPO2-202ENST00000425528 5122 ntAPPRIS P4 TSL 5 BASIC13.26□□□□□ -0.29
RHBDD3Q9Y3P4 AGRN-210ENST00000620552 7394 ntTSL 5 BASIC13.26□□□□□ -0.29
RHBDD3Q9Y3P4 SERP1-201ENST00000239944 3171 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
RHBDD3Q9Y3P4 TKT-201ENST00000296289 1931 ntTSL 5 BASIC13.26□□□□□ -0.29
RHBDD3Q9Y3P4 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
RHBDD3Q9Y3P4 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC13.26□□□□□ -0.29
RHBDD3Q9Y3P4 DFNA5-201ENST00000342947 2590 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
RHBDD3Q9Y3P4 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
RHBDD3Q9Y3P4 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
RHBDD3Q9Y3P4 RADIL-201ENST00000399583 3689 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
RHBDD3Q9Y3P4 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC13.26□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 165.4 ms