Protein–RNA interactions for Protein: Q9NWF4

SLC52A1, Solute carrier family 52, riboflavin transporter, member 1, humanhuman

Predictions only

Length 448 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC52A1Q9NWF4 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC21.12■□□□□ 0.97
SLC52A1Q9NWF4 LY86-201ENST00000230568 559 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
SLC52A1Q9NWF4 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
SLC52A1Q9NWF4 GNRH2-204ENST00000380347 758 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
SLC52A1Q9NWF4 LINC00686-201ENST00000435412 332 ntTSL 3 BASIC21.12■□□□□ 0.97
SLC52A1Q9NWF4 TAC3-208ENST00000441881 731 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
SLC52A1Q9NWF4 UPK1A-AS1-201ENST00000443196 795 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
SLC52A1Q9NWF4 NCK1-AS1-203ENST00000474250 827 ntTSL 2 BASIC21.12■□□□□ 0.97
SLC52A1Q9NWF4 RPS25-202ENST00000527673 835 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
SLC52A1Q9NWF4 EMP2-203ENST00000536829 781 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
SLC52A1Q9NWF4 AC012645.2-201ENST00000566190 553 ntTSL 4 BASIC21.12■□□□□ 0.97
SLC52A1Q9NWF4 AC145207.8-201ENST00000580897 563 ntTSL 4 BASIC21.12■□□□□ 0.97
SLC52A1Q9NWF4 AC242426.4-201ENST00000606856 573 ntTSL 5 BASIC21.12■□□□□ 0.97
SLC52A1Q9NWF4 TAC3-211ENST00000615887 1120 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
SLC52A1Q9NWF4 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
SLC52A1Q9NWF4 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
SLC52A1Q9NWF4 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
SLC52A1Q9NWF4 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
SLC52A1Q9NWF4 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
SLC52A1Q9NWF4 AL513327.1-206ENST00000587696 1432 ntTSL 5 BASIC21.12■□□□□ 0.97
SLC52A1Q9NWF4 AP000552.1-203ENST00000416615 1930 ntTSL 5 BASIC21.12■□□□□ 0.97
SLC52A1Q9NWF4 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
SLC52A1Q9NWF4 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
SLC52A1Q9NWF4 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC21.11■□□□□ 0.97
SLC52A1Q9NWF4 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
SLC52A1Q9NWF4 AL118508.1-201ENST00000613502 2345 ntBASIC21.11■□□□□ 0.97
SLC52A1Q9NWF4 GJB1-203ENST00000374029 1587 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
SLC52A1Q9NWF4 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
SLC52A1Q9NWF4 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
SLC52A1Q9NWF4 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
SLC52A1Q9NWF4 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
SLC52A1Q9NWF4 KRT17P5-201ENST00000332088 839 ntBASIC21.11■□□□□ 0.97
SLC52A1Q9NWF4 PDCD5-202ENST00000379316 154 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
SLC52A1Q9NWF4 IGF2-201ENST00000381389 1023 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
SLC52A1Q9NWF4 PHACTR2-204ENST00000397980 745 ntTSL 3 BASIC21.11■□□□□ 0.97
SLC52A1Q9NWF4 AC093484.1-201ENST00000441875 477 ntTSL 5 BASIC21.11■□□□□ 0.97
SLC52A1Q9NWF4 Z99943.1-201ENST00000451545 718 ntTSL 3 BASIC21.11■□□□□ 0.97
SLC52A1Q9NWF4 MSC-AS1-204ENST00000518916 864 ntTSL 3 BASIC21.11■□□□□ 0.97
SLC52A1Q9NWF4 AC069185.1-202ENST00000533405 471 ntTSL 3 BASIC21.11■□□□□ 0.97
SLC52A1Q9NWF4 KRT8P1-201ENST00000557533 1207 ntBASIC21.11■□□□□ 0.97
SLC52A1Q9NWF4 AC124068.2-202ENST00000562356 612 ntTSL 3 BASIC21.11■□□□□ 0.97
SLC52A1Q9NWF4 AC124068.2-201ENST00000569473 1109 ntBASIC21.11■□□□□ 0.97
SLC52A1Q9NWF4 ZNF790-AS1-203ENST00000588906 850 ntTSL 2 BASIC21.11■□□□□ 0.97
SLC52A1Q9NWF4 PDCD5-208ENST00000592786 468 ntTSL 3 BASIC21.11■□□□□ 0.97
SLC52A1Q9NWF4 SLC27A5-204ENST00000594786 643 ntTSL 2 BASIC21.11■□□□□ 0.97
SLC52A1Q9NWF4 AC008758.6-201ENST00000598753 588 ntAPPRIS P1 TSL 4 BASIC21.11■□□□□ 0.97
SLC52A1Q9NWF4 ASNSD1-206ENST00000607062 968 ntTSL 5 BASIC21.11■□□□□ 0.97
SLC52A1Q9NWF4 AC138466.5-201ENST00000624002 808 ntBASIC21.11■□□□□ 0.97
SLC52A1Q9NWF4 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
SLC52A1Q9NWF4 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC21.11■□□□□ 0.97
SLC52A1Q9NWF4 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
SLC52A1Q9NWF4 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC21.11■□□□□ 0.97
SLC52A1Q9NWF4 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC21.11■□□□□ 0.97
SLC52A1Q9NWF4 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC21.11■□□□□ 0.97
SLC52A1Q9NWF4 AC139712.1-201ENST00000378256 1875 ntBASIC21.11■□□□□ 0.97
SLC52A1Q9NWF4 PAIP2-202ENST00000394795 2297 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
SLC52A1Q9NWF4 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC21.11■□□□□ 0.97
SLC52A1Q9NWF4 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
SLC52A1Q9NWF4 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
SLC52A1Q9NWF4 EDNRB-204ENST00000626030 1571 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
SLC52A1Q9NWF4 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
SLC52A1Q9NWF4 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
SLC52A1Q9NWF4 PAX5-214ENST00000523241 1342 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
SLC52A1Q9NWF4 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC21.1■□□□□ 0.97
SLC52A1Q9NWF4 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
SLC52A1Q9NWF4 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
SLC52A1Q9NWF4 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC21.1■□□□□ 0.97
SLC52A1Q9NWF4 IL9RP3-201ENST00000442856 1674 ntBASIC21.1■□□□□ 0.97
SLC52A1Q9NWF4 MIR1227-201ENST00000408484 88 ntBASIC21.1■□□□□ 0.97
SLC52A1Q9NWF4 NDUFS7-203ENST00000414651 841 ntTSL 5 BASIC21.1■□□□□ 0.97
SLC52A1Q9NWF4 AL512306.1-201ENST00000432698 848 ntBASIC21.1■□□□□ 0.97
SLC52A1Q9NWF4 ALG1L13P-202ENST00000519320 584 ntBASIC21.1■□□□□ 0.97
SLC52A1Q9NWF4 IGHVIII-5-2-201ENST00000522505 261 ntBASIC21.1■□□□□ 0.97
SLC52A1Q9NWF4 AC037486.1-201ENST00000523792 790 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
SLC52A1Q9NWF4 RTN4RL2-203ENST00000533205 637 ntTSL 3 BASIC21.1■□□□□ 0.97
SLC52A1Q9NWF4 AC012379.2-201ENST00000560237 765 ntTSL 2 BASIC21.1■□□□□ 0.97
SLC52A1Q9NWF4 NPTN-204ENST00000562924 1094 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
SLC52A1Q9NWF4 MIR3180-2-201ENST00000581748 88 ntBASIC21.1■□□□□ 0.97
SLC52A1Q9NWF4 AC011481.2-201ENST00000585408 426 ntTSL 3 BASIC21.1■□□□□ 0.97
SLC52A1Q9NWF4 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
SLC52A1Q9NWF4 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
SLC52A1Q9NWF4 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
SLC52A1Q9NWF4 AC026691.1-201ENST00000602502 2017 ntBASIC21.1■□□□□ 0.97
SLC52A1Q9NWF4 AC092135.3-201ENST00000624151 1846 ntBASIC21.1■□□□□ 0.97
SLC52A1Q9NWF4 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
SLC52A1Q9NWF4 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
SLC52A1Q9NWF4 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC21.1■□□□□ 0.97
SLC52A1Q9NWF4 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
SLC52A1Q9NWF4 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC21.1■□□□□ 0.97
SLC52A1Q9NWF4 TNF-208ENST00000449264 1676 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
SLC52A1Q9NWF4 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC21.09■□□□□ 0.97
SLC52A1Q9NWF4 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
SLC52A1Q9NWF4 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
SLC52A1Q9NWF4 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC21.09■□□□□ 0.97
SLC52A1Q9NWF4 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
SLC52A1Q9NWF4 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
SLC52A1Q9NWF4 HFE-201ENST00000309234 1158 ntAPPRIS ALT2 TSL 2 BASIC21.09■□□□□ 0.97
SLC52A1Q9NWF4 ASNA1-201ENST00000357332 1280 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
SLC52A1Q9NWF4 SPIN2B-203ENST00000374910 725 ntTSL 3 BASIC21.09■□□□□ 0.97
SLC52A1Q9NWF4 INS-IGF2-202ENST00000397270 828 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 87.2 ms