Protein–RNA interactions for Protein: Q9HC52

CBX8, Chromobox protein homolog 8, humanhuman

Predictions only

Length 389 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX8Q9HC52 SATB1-217ENST00000493952 626 ntTSL 3 BASIC16.87■□□□□ 0.29
CBX8Q9HC52 AC004066.1-201ENST00000502488 802 ntBASIC16.87■□□□□ 0.29
CBX8Q9HC52 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC16.87■□□□□ 0.29
CBX8Q9HC52 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC16.87■□□□□ 0.29
CBX8Q9HC52 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
CBX8Q9HC52 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC16.87■□□□□ 0.29
CBX8Q9HC52 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CBX8Q9HC52 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC16.87■□□□□ 0.29
CBX8Q9HC52 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC16.87■□□□□ 0.29
CBX8Q9HC52 AC026790.1-201ENST00000399760 2941 ntTSL 2 BASIC16.87■□□□□ 0.29
CBX8Q9HC52 EHD1-202ENST00000359393 3618 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
CBX8Q9HC52 PLCD1-204ENST00000463876 2963 ntAPPRIS ALT1 TSL 2 BASIC16.87■□□□□ 0.29
CBX8Q9HC52 MLLT11-201ENST00000368921 4075 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CBX8Q9HC52 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CBX8Q9HC52 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CBX8Q9HC52 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CBX8Q9HC52 MEFV-201ENST00000219596 3499 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
CBX8Q9HC52 EPHB4-210ENST00000616502 3737 ntTSL 5 BASIC16.86■□□□□ 0.29
CBX8Q9HC52 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC16.86■□□□□ 0.29
CBX8Q9HC52 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC16.86■□□□□ 0.29
CBX8Q9HC52 AL355390.1-201ENST00000325811 2328 ntTSL 2 BASIC16.86■□□□□ 0.29
CBX8Q9HC52 FP565260.2-201ENST00000623476 1599 ntAPPRIS P1 TSL 3 BASIC16.86■□□□□ 0.29
CBX8Q9HC52 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
CBX8Q9HC52 PRAME-214ENST00000543184 2758 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
CBX8Q9HC52 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC16.86■□□□□ 0.29
CBX8Q9HC52 TPM3P9-201ENST00000424846 2920 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CBX8Q9HC52 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CBX8Q9HC52 STOM-202ENST00000347359 870 ntTSL 2 BASIC16.86■□□□□ 0.29
CBX8Q9HC52 NAALADL1-202ENST00000355721 2100 ntTSL 5 BASIC16.86■□□□□ 0.29
CBX8Q9HC52 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
CBX8Q9HC52 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC16.86■□□□□ 0.29
CBX8Q9HC52 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CBX8Q9HC52 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC16.86■□□□□ 0.29
CBX8Q9HC52 MIR940-201ENST00000401276 94 ntBASIC16.86■□□□□ 0.29
CBX8Q9HC52 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC16.86■□□□□ 0.29
CBX8Q9HC52 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CBX8Q9HC52 PGAM5P1-201ENST00000518923 814 ntBASIC16.86■□□□□ 0.29
CBX8Q9HC52 MPP2-214ENST00000523501 2121 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
CBX8Q9HC52 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC16.86■□□□□ 0.29
CBX8Q9HC52 AL512361.1-201ENST00000554200 418 ntBASIC16.86■□□□□ 0.29
CBX8Q9HC52 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
CBX8Q9HC52 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC16.86■□□□□ 0.29
CBX8Q9HC52 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC16.86■□□□□ 0.29
CBX8Q9HC52 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CBX8Q9HC52 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CBX8Q9HC52 PPRC1-203ENST00000413464 4580 ntTSL 2 BASIC16.86■□□□□ 0.29
CBX8Q9HC52 CUL7-203ENST00000535468 5504 ntAPPRIS ALT2 TSL 2 BASIC16.86■□□□□ 0.29
CBX8Q9HC52 NLRX1-204ENST00000409991 3716 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CBX8Q9HC52 RET-202ENST00000355710 5659 ntAPPRIS P3 TSL 5 BASIC16.86■□□□□ 0.29
CBX8Q9HC52 OFD1-204ENST00000398395 3307 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
CBX8Q9HC52 KRT8P14-201ENST00000414254 1442 ntBASIC16.86■□□□□ 0.29
CBX8Q9HC52 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC16.86■□□□□ 0.29
CBX8Q9HC52 MYD88-201ENST00000396334 2850 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
CBX8Q9HC52 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CBX8Q9HC52 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CBX8Q9HC52 LRRC20-201ENST00000355790 3414 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CBX8Q9HC52 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CBX8Q9HC52 PABPC1-201ENST00000318607 3485 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CBX8Q9HC52 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CBX8Q9HC52 PCDHA5-201ENST00000529619 4157 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CBX8Q9HC52 AC007920.1-201ENST00000356133 2674 ntTSL 2 BASIC16.85■□□□□ 0.29
CBX8Q9HC52 KIAA1211L-201ENST00000397899 3907 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
CBX8Q9HC52 ZCCHC7-209ENST00000534928 2828 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CBX8Q9HC52 USP36-201ENST00000312010 5234 ntAPPRIS P2 TSL 5 BASIC16.85■□□□□ 0.29
CBX8Q9HC52 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
CBX8Q9HC52 RBM26-203ENST00000438737 4132 ntTSL 5 BASIC16.85■□□□□ 0.29
CBX8Q9HC52 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC16.85■□□□□ 0.29
CBX8Q9HC52 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CBX8Q9HC52 NCKAP5L-201ENST00000335999 4900 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
CBX8Q9HC52 CSNK1D-202ENST00000314028 3712 ntAPPRIS P4 TSL 1 (best) BASIC16.85■□□□□ 0.29
CBX8Q9HC52 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CBX8Q9HC52 SLC19A1-201ENST00000311124 3811 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
CBX8Q9HC52 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
CBX8Q9HC52 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
CBX8Q9HC52 PMP22-202ENST00000395936 816 ntTSL 3 BASIC16.85■□□□□ 0.29
CBX8Q9HC52 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC16.85■□□□□ 0.29
CBX8Q9HC52 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC16.85■□□□□ 0.29
CBX8Q9HC52 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC16.85■□□□□ 0.29
CBX8Q9HC52 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC16.85■□□□□ 0.29
CBX8Q9HC52 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CBX8Q9HC52 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC16.85■□□□□ 0.29
CBX8Q9HC52 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC16.85■□□□□ 0.29
CBX8Q9HC52 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC16.85■□□□□ 0.29
CBX8Q9HC52 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC16.85■□□□□ 0.29
CBX8Q9HC52 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC16.85■□□□□ 0.29
CBX8Q9HC52 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CBX8Q9HC52 MIR6080-201ENST00000617359 66 ntBASIC16.85■□□□□ 0.29
CBX8Q9HC52 HSD17B4-215ENST00000510025 2589 ntTSL 2 BASIC16.85■□□□□ 0.29
CBX8Q9HC52 THBS4-201ENST00000350881 3222 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
CBX8Q9HC52 ZFYVE28-211ENST00000515312 3247 ntAPPRIS ALT2 TSL 2 BASIC16.85■□□□□ 0.29
CBX8Q9HC52 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
CBX8Q9HC52 CEP295NL-201ENST00000322630 2090 ntTSL 2 BASIC16.85■□□□□ 0.29
CBX8Q9HC52 CEP131-202ENST00000374782 3505 ntAPPRIS P3 TSL 5 BASIC16.85■□□□□ 0.29
CBX8Q9HC52 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CBX8Q9HC52 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CBX8Q9HC52 SIMC1-205ENST00000443967 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
CBX8Q9HC52 THTPA-201ENST00000288014 2860 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CBX8Q9HC52 FAAP100-201ENST00000327787 3627 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CBX8Q9HC52 AC020910.6-201ENST00000623084 1459 ntBASIC16.85■□□□□ 0.29
CBX8Q9HC52 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 59.5 ms