Protein–RNA interactions for Protein: Q9H9A6

LRRC40, Leucine-rich repeat-containing protein 40, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC40Q9H9A6 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
LRRC40Q9H9A6 B4GALT3-213ENST00000622395 2414 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
LRRC40Q9H9A6 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
LRRC40Q9H9A6 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC15.35■□□□□ 0.05
LRRC40Q9H9A6 TSPAN11-201ENST00000261177 5505 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
LRRC40Q9H9A6 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC15.35■□□□□ 0.05
LRRC40Q9H9A6 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
LRRC40Q9H9A6 KIAA1468-201ENST00000256858 5579 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
LRRC40Q9H9A6 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
LRRC40Q9H9A6 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC15.35■□□□□ 0.05
LRRC40Q9H9A6 DCUN1D3-201ENST00000324344 6162 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
LRRC40Q9H9A6 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
LRRC40Q9H9A6 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC15.34■□□□□ 0.05
LRRC40Q9H9A6 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
LRRC40Q9H9A6 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
LRRC40Q9H9A6 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC15.34■□□□□ 0.05
LRRC40Q9H9A6 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
LRRC40Q9H9A6 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
LRRC40Q9H9A6 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
LRRC40Q9H9A6 TDRD5-204ENST00000444136 3946 ntAPPRIS ALT1 TSL 1 (best) BASIC15.34■□□□□ 0.05
LRRC40Q9H9A6 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
LRRC40Q9H9A6 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
LRRC40Q9H9A6 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
LRRC40Q9H9A6 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
LRRC40Q9H9A6 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
LRRC40Q9H9A6 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC15.34■□□□□ 0.05
LRRC40Q9H9A6 HAP1-204ENST00000393939 5683 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
LRRC40Q9H9A6 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
LRRC40Q9H9A6 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC15.34■□□□□ 0.05
LRRC40Q9H9A6 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC15.34■□□□□ 0.05
LRRC40Q9H9A6 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
LRRC40Q9H9A6 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
LRRC40Q9H9A6 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC15.34■□□□□ 0.05
LRRC40Q9H9A6 LSM5-207ENST00000410044 687 ntTSL 3 BASIC15.34■□□□□ 0.05
LRRC40Q9H9A6 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
LRRC40Q9H9A6 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
LRRC40Q9H9A6 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC15.34■□□□□ 0.05
LRRC40Q9H9A6 HNRNPA1P13-201ENST00000510646 963 ntBASIC15.34■□□□□ 0.05
LRRC40Q9H9A6 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
LRRC40Q9H9A6 ENPP7P5-201ENST00000541031 1031 ntBASIC15.34■□□□□ 0.05
LRRC40Q9H9A6 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC15.34■□□□□ 0.05
LRRC40Q9H9A6 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC15.34■□□□□ 0.05
LRRC40Q9H9A6 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC15.34■□□□□ 0.05
LRRC40Q9H9A6 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC15.34■□□□□ 0.05
LRRC40Q9H9A6 AL603764.1-201ENST00000636452 321 ntBASIC15.34■□□□□ 0.05
LRRC40Q9H9A6 ADORA1-201ENST00000309502 2896 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
LRRC40Q9H9A6 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC15.34■□□□□ 0.05
LRRC40Q9H9A6 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
LRRC40Q9H9A6 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC15.34■□□□□ 0.05
LRRC40Q9H9A6 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
LRRC40Q9H9A6 KMT2E-201ENST00000257745 6714 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
LRRC40Q9H9A6 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
LRRC40Q9H9A6 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
LRRC40Q9H9A6 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC15.34■□□□□ 0.05
LRRC40Q9H9A6 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
LRRC40Q9H9A6 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC15.34■□□□□ 0.05
LRRC40Q9H9A6 SRSF8-201ENST00000587424 4028 ntAPPRIS P1 BASIC15.33■□□□□ 0.05
LRRC40Q9H9A6 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC15.33■□□□□ 0.05
LRRC40Q9H9A6 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.05
LRRC40Q9H9A6 KIAA1191-201ENST00000298569 2991 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
LRRC40Q9H9A6 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC15.33■□□□□ 0.05
LRRC40Q9H9A6 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.05
LRRC40Q9H9A6 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC15.33■□□□□ 0.05
LRRC40Q9H9A6 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.05
LRRC40Q9H9A6 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC15.33■□□□□ 0.05
LRRC40Q9H9A6 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.05
LRRC40Q9H9A6 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
LRRC40Q9H9A6 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
LRRC40Q9H9A6 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
LRRC40Q9H9A6 ADAMTS2-201ENST00000251582 6754 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
LRRC40Q9H9A6 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
LRRC40Q9H9A6 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
LRRC40Q9H9A6 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
LRRC40Q9H9A6 FGD5-206ENST00000543601 5768 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
LRRC40Q9H9A6 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
LRRC40Q9H9A6 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
LRRC40Q9H9A6 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
LRRC40Q9H9A6 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
LRRC40Q9H9A6 MIR661-201ENST00000384842 89 ntBASIC15.33■□□□□ 0.04
LRRC40Q9H9A6 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
LRRC40Q9H9A6 KLF2P2-201ENST00000416807 1039 ntBASIC15.33■□□□□ 0.04
LRRC40Q9H9A6 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
LRRC40Q9H9A6 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC15.33■□□□□ 0.04
LRRC40Q9H9A6 ELK1P1-201ENST00000485699 580 ntBASIC15.33■□□□□ 0.04
LRRC40Q9H9A6 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC15.33■□□□□ 0.04
LRRC40Q9H9A6 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC15.33■□□□□ 0.04
LRRC40Q9H9A6 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC15.33■□□□□ 0.04
LRRC40Q9H9A6 API5-211ENST00000534695 560 ntTSL 5 BASIC15.33■□□□□ 0.04
LRRC40Q9H9A6 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
LRRC40Q9H9A6 CDK4-206ENST00000549606 558 ntTSL 2 BASIC15.33■□□□□ 0.04
LRRC40Q9H9A6 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC15.33■□□□□ 0.04
LRRC40Q9H9A6 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
LRRC40Q9H9A6 RN7SL204P-201ENST00000582831 262 ntBASIC15.33■□□□□ 0.04
LRRC40Q9H9A6 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC15.33■□□□□ 0.04
LRRC40Q9H9A6 AP005019.2-201ENST00000615104 511 ntBASIC15.33■□□□□ 0.04
LRRC40Q9H9A6 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
LRRC40Q9H9A6 PITPNM3-201ENST00000262483 7086 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
LRRC40Q9H9A6 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
LRRC40Q9H9A6 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC15.33■□□□□ 0.04
LRRC40Q9H9A6 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 53.3 ms