Protein–RNA interactions for Protein: Q9BSR8

YIPF4, Protein YIPF4, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF4Q9BSR8 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC14.28□□□□□ -0.12
YIPF4Q9BSR8 GAPDHP40-201ENST00000505218 1006 ntBASIC14.28□□□□□ -0.12
YIPF4Q9BSR8 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC14.28□□□□□ -0.12
YIPF4Q9BSR8 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
YIPF4Q9BSR8 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
YIPF4Q9BSR8 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC14.28□□□□□ -0.12
YIPF4Q9BSR8 AL596325.1-201ENST00000563991 1082 ntBASIC14.28□□□□□ -0.12
YIPF4Q9BSR8 SPDYE22P-201ENST00000582158 798 ntBASIC14.28□□□□□ -0.12
YIPF4Q9BSR8 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC14.28□□□□□ -0.12
YIPF4Q9BSR8 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
YIPF4Q9BSR8 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC14.28□□□□□ -0.12
YIPF4Q9BSR8 CAMKK2-202ENST00000337174 5304 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
YIPF4Q9BSR8 PPM1F-201ENST00000263212 5143 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
YIPF4Q9BSR8 PDPK1-202ENST00000342085 7241 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
YIPF4Q9BSR8 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
YIPF4Q9BSR8 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC14.28□□□□□ -0.12
YIPF4Q9BSR8 TSC2-203ENST00000382538 5264 ntAPPRIS ALT2 TSL 2 BASIC14.28□□□□□ -0.12
YIPF4Q9BSR8 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC14.27□□□□□ -0.12
YIPF4Q9BSR8 MTHFR-210ENST00000641407 2387 ntBASIC14.27□□□□□ -0.12
YIPF4Q9BSR8 SEPT7-201ENST00000350320 4350 ntAPPRIS P5 TSL 5 BASIC14.27□□□□□ -0.12
YIPF4Q9BSR8 AC232323.1-201ENST00000540724 2099 ntBASIC14.27□□□□□ -0.12
YIPF4Q9BSR8 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC14.27□□□□□ -0.12
YIPF4Q9BSR8 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
YIPF4Q9BSR8 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
YIPF4Q9BSR8 C3-201ENST00000245907 5263 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
YIPF4Q9BSR8 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
YIPF4Q9BSR8 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC14.27□□□□□ -0.12
YIPF4Q9BSR8 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC14.27□□□□□ -0.12
YIPF4Q9BSR8 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC14.27□□□□□ -0.12
YIPF4Q9BSR8 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
YIPF4Q9BSR8 NUDT16-202ENST00000521288 6108 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
YIPF4Q9BSR8 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
YIPF4Q9BSR8 TBC1D1-201ENST00000261439 5700 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
YIPF4Q9BSR8 PI4K2A-201ENST00000370631 4189 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
YIPF4Q9BSR8 LILRP1-201ENST00000444199 1370 ntBASIC14.27□□□□□ -0.12
YIPF4Q9BSR8 KIAA0319-203ENST00000535378 6896 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.12
YIPF4Q9BSR8 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
YIPF4Q9BSR8 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
YIPF4Q9BSR8 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC14.27□□□□□ -0.13
YIPF4Q9BSR8 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
YIPF4Q9BSR8 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
YIPF4Q9BSR8 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC14.27□□□□□ -0.13
YIPF4Q9BSR8 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC14.27□□□□□ -0.13
YIPF4Q9BSR8 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
YIPF4Q9BSR8 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC14.27□□□□□ -0.13
YIPF4Q9BSR8 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
YIPF4Q9BSR8 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
YIPF4Q9BSR8 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC14.27□□□□□ -0.13
YIPF4Q9BSR8 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.13
YIPF4Q9BSR8 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
YIPF4Q9BSR8 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
YIPF4Q9BSR8 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC14.27□□□□□ -0.13
YIPF4Q9BSR8 CDK4-206ENST00000549606 558 ntTSL 2 BASIC14.27□□□□□ -0.13
YIPF4Q9BSR8 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC14.27□□□□□ -0.13
YIPF4Q9BSR8 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC14.27□□□□□ -0.13
YIPF4Q9BSR8 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC14.27□□□□□ -0.13
YIPF4Q9BSR8 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC14.27□□□□□ -0.13
YIPF4Q9BSR8 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC14.27□□□□□ -0.13
YIPF4Q9BSR8 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC14.27□□□□□ -0.13
YIPF4Q9BSR8 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC14.27□□□□□ -0.13
YIPF4Q9BSR8 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC14.27□□□□□ -0.13
YIPF4Q9BSR8 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC14.27□□□□□ -0.13
YIPF4Q9BSR8 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
YIPF4Q9BSR8 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC14.27□□□□□ -0.13
YIPF4Q9BSR8 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
YIPF4Q9BSR8 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
YIPF4Q9BSR8 PRICKLE1-201ENST00000345127 5902 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
YIPF4Q9BSR8 SPAG9-201ENST00000262013 8273 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
YIPF4Q9BSR8 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
YIPF4Q9BSR8 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC14.27□□□□□ -0.13
YIPF4Q9BSR8 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
YIPF4Q9BSR8 AC117489.1-201ENST00000625169 3217 ntBASIC14.27□□□□□ -0.13
YIPF4Q9BSR8 TMPRSS6-204ENST00000406856 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
YIPF4Q9BSR8 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC14.27□□□□□ -0.13
YIPF4Q9BSR8 RIC1-201ENST00000251879 4127 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
YIPF4Q9BSR8 CRLS1-201ENST00000378863 3958 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
YIPF4Q9BSR8 TBC1D24-205ENST00000567020 6673 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
YIPF4Q9BSR8 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
YIPF4Q9BSR8 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
YIPF4Q9BSR8 LINC00639-201ENST00000553932 4496 ntTSL 2 BASIC14.27□□□□□ -0.13
YIPF4Q9BSR8 MROH1-209ENST00000534366 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
YIPF4Q9BSR8 TJP3-202ENST00000541714 3350 ntAPPRIS P3 TSL 2 BASIC14.26□□□□□ -0.13
YIPF4Q9BSR8 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
YIPF4Q9BSR8 AL138799.1-201ENST00000448213 1675 ntBASIC14.26□□□□□ -0.13
YIPF4Q9BSR8 TJP2-208ENST00000535702 3984 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
YIPF4Q9BSR8 GOPC-201ENST00000052569 4590 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
YIPF4Q9BSR8 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
YIPF4Q9BSR8 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC14.26□□□□□ -0.13
YIPF4Q9BSR8 TMEM200C-202ENST00000581347 10638 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
YIPF4Q9BSR8 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC14.26□□□□□ -0.13
YIPF4Q9BSR8 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
YIPF4Q9BSR8 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC14.26□□□□□ -0.13
YIPF4Q9BSR8 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC14.26□□□□□ -0.13
YIPF4Q9BSR8 AL390755.1-201ENST00000623716 2027 ntBASIC14.26□□□□□ -0.13
YIPF4Q9BSR8 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
YIPF4Q9BSR8 AL360270.3-201ENST00000609118 1348 ntBASIC14.26□□□□□ -0.13
YIPF4Q9BSR8 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC14.26□□□□□ -0.13
YIPF4Q9BSR8 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
YIPF4Q9BSR8 HECW1-203ENST00000453890 5169 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
YIPF4Q9BSR8 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 60.3 ms