Protein–RNA interactions for Protein: Q9BSM1

PCGF1, Polycomb group RING finger protein 1, humanhuman

Predictions only

Length 259 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCGF1Q9BSM1 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
PCGF1Q9BSM1 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC12.75□□□□□ -0.37
PCGF1Q9BSM1 AC017083.2-201ENST00000608069 979 ntBASIC12.75□□□□□ -0.37
PCGF1Q9BSM1 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC12.75□□□□□ -0.37
PCGF1Q9BSM1 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC12.75□□□□□ -0.37
PCGF1Q9BSM1 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
PCGF1Q9BSM1 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC12.75□□□□□ -0.37
PCGF1Q9BSM1 ADAMTS14-201ENST00000373207 5260 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
PCGF1Q9BSM1 LHFPL4-201ENST00000287585 4880 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
PCGF1Q9BSM1 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
PCGF1Q9BSM1 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
PCGF1Q9BSM1 EPHX2-207ENST00000521400 3140 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
PCGF1Q9BSM1 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
PCGF1Q9BSM1 DDX59-206ENST00000447706 2900 ntTSL 2 BASIC12.75□□□□□ -0.37
PCGF1Q9BSM1 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
PCGF1Q9BSM1 NXF1-213ENST00000532297 2795 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
PCGF1Q9BSM1 SLC43A2-201ENST00000301335 8136 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
PCGF1Q9BSM1 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC12.74□□□□□ -0.37
PCGF1Q9BSM1 TAF6-205ENST00000437822 2318 ntTSL 2 BASIC12.74□□□□□ -0.37
PCGF1Q9BSM1 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC12.74□□□□□ -0.37
PCGF1Q9BSM1 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC12.74□□□□□ -0.37
PCGF1Q9BSM1 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
PCGF1Q9BSM1 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
PCGF1Q9BSM1 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
PCGF1Q9BSM1 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
PCGF1Q9BSM1 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC12.74□□□□□ -0.37
PCGF1Q9BSM1 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
PCGF1Q9BSM1 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
PCGF1Q9BSM1 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC12.74□□□□□ -0.37
PCGF1Q9BSM1 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
PCGF1Q9BSM1 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
PCGF1Q9BSM1 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC12.74□□□□□ -0.37
PCGF1Q9BSM1 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
PCGF1Q9BSM1 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
PCGF1Q9BSM1 SYBU-235ENST00000533895 3244 ntAPPRIS P4 TSL 1 (best) BASIC12.74□□□□□ -0.37
PCGF1Q9BSM1 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC12.74□□□□□ -0.37
PCGF1Q9BSM1 LINC01305-201ENST00000420866 3123 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
PCGF1Q9BSM1 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC12.74□□□□□ -0.37
PCGF1Q9BSM1 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
PCGF1Q9BSM1 CICP23-201ENST00000605013 2741 ntBASIC12.74□□□□□ -0.37
PCGF1Q9BSM1 SRSF8-201ENST00000587424 4028 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
PCGF1Q9BSM1 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC12.74□□□□□ -0.37
PCGF1Q9BSM1 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC12.74□□□□□ -0.37
PCGF1Q9BSM1 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC12.74□□□□□ -0.37
PCGF1Q9BSM1 AC112492.5-201ENST00000421897 457 ntBASIC12.74□□□□□ -0.37
PCGF1Q9BSM1 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC12.74□□□□□ -0.37
PCGF1Q9BSM1 KRT43P-201ENST00000434019 910 ntBASIC12.74□□□□□ -0.37
PCGF1Q9BSM1 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
PCGF1Q9BSM1 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC12.74□□□□□ -0.37
PCGF1Q9BSM1 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC12.74□□□□□ -0.37
PCGF1Q9BSM1 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC12.74□□□□□ -0.37
PCGF1Q9BSM1 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC12.74□□□□□ -0.37
PCGF1Q9BSM1 ENPP7P5-201ENST00000541031 1031 ntBASIC12.74□□□□□ -0.37
PCGF1Q9BSM1 AC124283.3-201ENST00000570869 594 ntBASIC12.74□□□□□ -0.37
PCGF1Q9BSM1 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC12.74□□□□□ -0.37
PCGF1Q9BSM1 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC12.74□□□□□ -0.37
PCGF1Q9BSM1 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
PCGF1Q9BSM1 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
PCGF1Q9BSM1 AL162274.1-201ENST00000617191 1098 ntBASIC12.74□□□□□ -0.37
PCGF1Q9BSM1 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
PCGF1Q9BSM1 SMAD2-202ENST00000356825 10445 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
PCGF1Q9BSM1 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
PCGF1Q9BSM1 CSRNP2-201ENST00000228515 4471 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
PCGF1Q9BSM1 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
PCGF1Q9BSM1 MAP3K4-201ENST00000348824 5295 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
PCGF1Q9BSM1 CDH23-201ENST00000224721 11139 ntAPPRIS P5 TSL 5 BASIC12.74□□□□□ -0.37
PCGF1Q9BSM1 CDH23-214ENST00000622827 11122 ntAPPRIS ALT1 TSL 5 BASIC12.74□□□□□ -0.37
PCGF1Q9BSM1 ZEB2-225ENST00000558170 4012 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
PCGF1Q9BSM1 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
PCGF1Q9BSM1 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
PCGF1Q9BSM1 GRB2-203ENST00000392562 3729 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
PCGF1Q9BSM1 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
PCGF1Q9BSM1 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
PCGF1Q9BSM1 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
PCGF1Q9BSM1 DNM1P51-202ENST00000558801 8752 ntTSL 5 BASIC12.74□□□□□ -0.37
PCGF1Q9BSM1 ARHGEF26-AS1-204ENST00000491862 2598 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
PCGF1Q9BSM1 AP002990.1-202ENST00000496634 5064 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
PCGF1Q9BSM1 CCDC50-201ENST00000392455 8429 ntAPPRIS ALT1 TSL 1 (best) BASIC12.73□□□□□ -0.37
PCGF1Q9BSM1 UNC13A-202ENST00000519716 9838 ntAPPRIS P2 TSL 5 BASIC12.73□□□□□ -0.37
PCGF1Q9BSM1 NUDT4-201ENST00000337179 9753 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
PCGF1Q9BSM1 MECR-202ENST00000373791 2416 ntTSL 2 BASIC12.73□□□□□ -0.37
PCGF1Q9BSM1 ANKMY1-204ENST00000391987 3221 ntTSL 5 BASIC12.73□□□□□ -0.37
PCGF1Q9BSM1 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
PCGF1Q9BSM1 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
PCGF1Q9BSM1 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
PCGF1Q9BSM1 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
PCGF1Q9BSM1 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC12.73□□□□□ -0.37
PCGF1Q9BSM1 DSEL-201ENST00000310045 9531 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
PCGF1Q9BSM1 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
PCGF1Q9BSM1 ADAM15-203ENST00000356955 2949 ntAPPRIS P4 TSL 1 (best) BASIC12.73□□□□□ -0.37
PCGF1Q9BSM1 EIF3J-AS1-201ENST00000313807 2863 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
PCGF1Q9BSM1 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
PCGF1Q9BSM1 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC12.73□□□□□ -0.37
PCGF1Q9BSM1 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC12.73□□□□□ -0.37
PCGF1Q9BSM1 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
PCGF1Q9BSM1 PEX5-207ENST00000455147 2689 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
PCGF1Q9BSM1 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
PCGF1Q9BSM1 VPS36-207ENST00000611132 4607 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
PCGF1Q9BSM1 TMTC1-207ENST00000552618 3915 ntTSL 5 BASIC12.73□□□□□ -0.37
PCGF1Q9BSM1 PPRC1-203ENST00000413464 4580 ntTSL 2 BASIC12.73□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 69.8 ms