Protein–RNA interactions for Protein: Q99731

CCL19, C-C motif chemokine 19, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL19Q99731 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC12.64□□□□□ -0.39
CCL19Q99731 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
CCL19Q99731 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
CCL19Q99731 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC12.64□□□□□ -0.39
CCL19Q99731 COX8C-201ENST00000342144 533 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
CCL19Q99731 VPS29-201ENST00000360579 1091 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
CCL19Q99731 TMEM14B-202ENST00000379542 975 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
CCL19Q99731 SERPINE3-201ENST00000400389 1218 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
CCL19Q99731 AL021707.5-201ENST00000420118 461 ntTSL 5 BASIC12.64□□□□□ -0.39
CCL19Q99731 AP1B1P1-201ENST00000432373 827 ntTSL 3 BASIC12.64□□□□□ -0.39
CCL19Q99731 SKA2-202ENST00000437036 625 ntTSL 2 BASIC12.64□□□□□ -0.39
CCL19Q99731 AC073150.1-201ENST00000450406 1084 ntBASIC12.64□□□□□ -0.39
CCL19Q99731 AL139412.1-202ENST00000452465 675 ntTSL 3 BASIC12.64□□□□□ -0.39
CCL19Q99731 PFN2-206ENST00000461930 606 ntTSL 4 BASIC12.64□□□□□ -0.39
CCL19Q99731 HLA-J-204ENST00000495278 958 ntBASIC12.64□□□□□ -0.39
CCL19Q99731 AC105389.3-201ENST00000508038 907 ntTSL 5 BASIC12.64□□□□□ -0.39
CCL19Q99731 AL031282.1-201ENST00000577672 409 ntTSL 3 BASIC12.64□□□□□ -0.39
CCL19Q99731 NAT9-211ENST00000580632 799 ntTSL 3 BASIC12.64□□□□□ -0.39
CCL19Q99731 AC127024.2-201ENST00000581019 789 ntTSL 5 BASIC12.64□□□□□ -0.39
CCL19Q99731 ELOF1-202ENST00000586120 658 ntAPPRIS P1 TSL 3 BASIC12.64□□□□□ -0.39
CCL19Q99731 AC011466.3-201ENST00000596563 852 ntTSL 2 BASIC12.64□□□□□ -0.39
CCL19Q99731 EXOSC5-204ENST00000596905 826 ntTSL 2 BASIC12.64□□□□□ -0.39
CCL19Q99731 AC103691.2-201ENST00000618824 433 ntBASIC12.64□□□□□ -0.39
CCL19Q99731 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
CCL19Q99731 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
CCL19Q99731 KIF1C-201ENST00000320785 7919 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
CCL19Q99731 CFAP36-201ENST00000339012 1373 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
CCL19Q99731 FOXO4-201ENST00000341558 1353 ntTSL 5 BASIC12.64□□□□□ -0.39
CCL19Q99731 TOB1-AS1-201ENST00000416263 1351 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
CCL19Q99731 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
CCL19Q99731 EVA1A-202ENST00000393913 1802 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
CCL19Q99731 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC12.64□□□□□ -0.39
CCL19Q99731 NFATC4-206ENST00000539237 5686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
CCL19Q99731 SLC51A-201ENST00000296327 1463 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
CCL19Q99731 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
CCL19Q99731 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
CCL19Q99731 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC12.64□□□□□ -0.39
CCL19Q99731 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC12.64□□□□□ -0.39
CCL19Q99731 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
CCL19Q99731 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC12.64□□□□□ -0.39
CCL19Q99731 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
CCL19Q99731 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC12.64□□□□□ -0.39
CCL19Q99731 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CCL19Q99731 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
CCL19Q99731 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC12.63□□□□□ -0.39
CCL19Q99731 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC12.63□□□□□ -0.39
CCL19Q99731 HIGD1A-202ENST00000418900 1322 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
CCL19Q99731 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
CCL19Q99731 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC12.63□□□□□ -0.39
CCL19Q99731 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC12.63□□□□□ -0.39
CCL19Q99731 DENND4C-209ENST00000602925 6831 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
CCL19Q99731 CAMK2D-205ENST00000394524 5294 ntAPPRIS ALT1 TSL 2 BASIC12.63□□□□□ -0.39
CCL19Q99731 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC12.63□□□□□ -0.39
CCL19Q99731 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
CCL19Q99731 AATBC-201ENST00000400385 4598 ntTSL 2 BASIC12.63□□□□□ -0.39
CCL19Q99731 TTC28-AS1-207ENST00000428584 5859 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
CCL19Q99731 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC12.63□□□□□ -0.39
CCL19Q99731 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CCL19Q99731 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
CCL19Q99731 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CCL19Q99731 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC12.63□□□□□ -0.39
CCL19Q99731 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC12.63□□□□□ -0.39
CCL19Q99731 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC12.63□□□□□ -0.39
CCL19Q99731 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
CCL19Q99731 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC12.63□□□□□ -0.39
CCL19Q99731 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC12.63□□□□□ -0.39
CCL19Q99731 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CCL19Q99731 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CCL19Q99731 AC239868.1-201ENST00000369385 493 ntBASIC12.63□□□□□ -0.39
CCL19Q99731 TSPO2-201ENST00000373158 718 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
CCL19Q99731 UBE4B-203ENST00000377153 1273 ntTSL 3 BASIC12.63□□□□□ -0.39
CCL19Q99731 KRTAP10-3-201ENST00000391620 971 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
CCL19Q99731 VCPKMT-201ENST00000395859 795 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
CCL19Q99731 AC026316.1-201ENST00000398900 414 ntBASIC12.63□□□□□ -0.39
CCL19Q99731 TEX33-202ENST00000402860 986 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
CCL19Q99731 VDAC1P1-201ENST00000439229 848 ntBASIC12.63□□□□□ -0.39
CCL19Q99731 AC098935.1-201ENST00000446057 611 ntBASIC12.63□□□□□ -0.39
CCL19Q99731 RN7SL8P-201ENST00000461771 266 ntBASIC12.63□□□□□ -0.39
CCL19Q99731 RN7SL181P-201ENST00000462921 277 ntBASIC12.63□□□□□ -0.39
CCL19Q99731 LINC02046-201ENST00000469812 378 ntTSL 3 BASIC12.63□□□□□ -0.39
CCL19Q99731 SZRD1-203ENST00000471507 892 ntAPPRIS ALT1 TSL 2 BASIC12.63□□□□□ -0.39
CCL19Q99731 AC104784.1-201ENST00000473096 294 ntBASIC12.63□□□□□ -0.39
CCL19Q99731 TAPBP-241ENST00000489157 1299 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
CCL19Q99731 CPLX2-209ENST00000515094 576 ntAPPRIS P1 TSL 4 BASIC12.63□□□□□ -0.39
CCL19Q99731 AC104561.3-201ENST00000518590 715 ntTSL 5 BASIC12.63□□□□□ -0.39
CCL19Q99731 AP001160.1-201ENST00000535817 565 ntTSL 3 BASIC12.63□□□□□ -0.39
CCL19Q99731 TMEM231-206ENST00000565067 1078 ntTSL 5 BASIC12.63□□□□□ -0.39
CCL19Q99731 RN7SL555P-201ENST00000584742 339 ntBASIC12.63□□□□□ -0.39
CCL19Q99731 AC005901.1-201ENST00000592766 552 ntTSL 4 BASIC12.63□□□□□ -0.39
CCL19Q99731 NCR1-206ENST00000598576 996 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
CCL19Q99731 TLDC2-203ENST00000602922 1179 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CCL19Q99731 HIST2H2BB-202ENST00000609585 563 ntTSL 2 BASIC12.63□□□□□ -0.39
CCL19Q99731 MIR6720-201ENST00000611664 98 ntBASIC12.63□□□□□ -0.39
CCL19Q99731 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CCL19Q99731 UNC13A-202ENST00000519716 9838 ntAPPRIS P2 TSL 5 BASIC12.63□□□□□ -0.39
CCL19Q99731 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CCL19Q99731 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CCL19Q99731 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
CCL19Q99731 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CCL19Q99731 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 58.6 ms