Protein–RNA interactions for Protein: Q96LD4

TRIM47, Tripartite motif-containing protein 47, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47Q96LD4 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
TRIM47Q96LD4 AC105250.1-201ENST00000509378 2057 ntBASIC17.65■□□□□ 0.42
TRIM47Q96LD4 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
TRIM47Q96LD4 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
TRIM47Q96LD4 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TRIM47Q96LD4 BCL2L13-206ENST00000399782 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
TRIM47Q96LD4 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TRIM47Q96LD4 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
TRIM47Q96LD4 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
TRIM47Q96LD4 AC126755.1-201ENST00000525846 6405 ntBASIC17.65■□□□□ 0.42
TRIM47Q96LD4 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
TRIM47Q96LD4 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
TRIM47Q96LD4 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.42
TRIM47Q96LD4 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC17.64■□□□□ 0.42
TRIM47Q96LD4 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC17.64■□□□□ 0.42
TRIM47Q96LD4 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
TRIM47Q96LD4 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
TRIM47Q96LD4 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC17.64■□□□□ 0.41
TRIM47Q96LD4 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
TRIM47Q96LD4 SFTA3-204ENST00000518529 1531 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TRIM47Q96LD4 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
TRIM47Q96LD4 COMMD4-201ENST00000267935 1067 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TRIM47Q96LD4 COMMD4-202ENST00000338995 722 ntTSL 2 BASIC17.64■□□□□ 0.41
TRIM47Q96LD4 NUDT1-203ENST00000356714 662 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TRIM47Q96LD4 PSME1-202ENST00000382708 1136 ntTSL 2 BASIC17.64■□□□□ 0.41
TRIM47Q96LD4 DBI-203ENST00000393103 599 ntAPPRIS P4 TSL 1 (best) BASIC17.64■□□□□ 0.41
TRIM47Q96LD4 NUDT1-204ENST00000397046 712 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TRIM47Q96LD4 NDUFAB1P1-201ENST00000404262 460 ntBASIC17.64■□□□□ 0.41
TRIM47Q96LD4 TMEM177-203ENST00000409951 1216 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
TRIM47Q96LD4 AL121901.1-201ENST00000419613 366 ntTSL 3 BASIC17.64■□□□□ 0.41
TRIM47Q96LD4 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
TRIM47Q96LD4 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC17.64■□□□□ 0.41
TRIM47Q96LD4 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC17.64■□□□□ 0.41
TRIM47Q96LD4 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC17.64■□□□□ 0.41
TRIM47Q96LD4 SUPT4H1P2-201ENST00000501248 353 ntBASIC17.64■□□□□ 0.41
TRIM47Q96LD4 ZNF385A-213ENST00000551771 1111 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
TRIM47Q96LD4 COMMD4-211ENST00000564815 639 ntTSL 3 BASIC17.64■□□□□ 0.41
TRIM47Q96LD4 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC17.64■□□□□ 0.41
TRIM47Q96LD4 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
TRIM47Q96LD4 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TRIM47Q96LD4 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC17.64■□□□□ 0.41
TRIM47Q96LD4 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
TRIM47Q96LD4 AC090616.6-203ENST00000579186 1945 ntBASIC17.64■□□□□ 0.41
TRIM47Q96LD4 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
TRIM47Q96LD4 ILF3-AS1-201ENST00000591501 1983 ntBASIC17.64■□□□□ 0.41
TRIM47Q96LD4 PPP1CA-201ENST00000312989 1389 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
TRIM47Q96LD4 BCAS4-201ENST00000358791 1378 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
TRIM47Q96LD4 AWAT1-201ENST00000374521 1365 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TRIM47Q96LD4 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC17.64■□□□□ 0.41
TRIM47Q96LD4 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
TRIM47Q96LD4 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TRIM47Q96LD4 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC17.64■□□□□ 0.41
TRIM47Q96LD4 FLII-221ENST00000578558 2377 ntTSL 5 BASIC17.64■□□□□ 0.41
TRIM47Q96LD4 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TRIM47Q96LD4 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TRIM47Q96LD4 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
TRIM47Q96LD4 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
TRIM47Q96LD4 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TRIM47Q96LD4 RBFOX2-201ENST00000262829 1538 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
TRIM47Q96LD4 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
TRIM47Q96LD4 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC17.63■□□□□ 0.41
TRIM47Q96LD4 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TRIM47Q96LD4 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
TRIM47Q96LD4 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC17.63■□□□□ 0.41
TRIM47Q96LD4 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
TRIM47Q96LD4 AKIP1-201ENST00000299576 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
TRIM47Q96LD4 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC17.63■□□□□ 0.41
TRIM47Q96LD4 LINC01006-204ENST00000435354 545 ntTSL 2 BASIC17.63■□□□□ 0.41
TRIM47Q96LD4 AP000356.1-201ENST00000438893 364 ntTSL 3 BASIC17.63■□□□□ 0.41
TRIM47Q96LD4 AL162457.2-202ENST00000442888 679 ntTSL 5 BASIC17.63■□□□□ 0.41
TRIM47Q96LD4 EEF1DP6-201ENST00000449232 372 ntBASIC17.63■□□□□ 0.41
TRIM47Q96LD4 TALDO1-203ENST00000528097 1231 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
TRIM47Q96LD4 PPY2P-201ENST00000582808 702 ntBASIC17.63■□□□□ 0.41
TRIM47Q96LD4 PPY2P-202ENST00000583761 657 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
TRIM47Q96LD4 SLC35G4-201ENST00000588001 1017 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
TRIM47Q96LD4 UBL5-208ENST00000593087 320 ntTSL 3 BASIC17.63■□□□□ 0.41
TRIM47Q96LD4 AL645939.5-201ENST00000606834 243 ntBASIC17.63■□□□□ 0.41
TRIM47Q96LD4 AC018635.2-201ENST00000608625 364 ntBASIC17.63■□□□□ 0.41
TRIM47Q96LD4 ENPP7P14-201ENST00000621765 1040 ntBASIC17.63■□□□□ 0.41
TRIM47Q96LD4 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC17.63■□□□□ 0.41
TRIM47Q96LD4 LRWD1-209ENST00000626402 138 ntTSL 3 BASIC17.63■□□□□ 0.41
TRIM47Q96LD4 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TRIM47Q96LD4 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TRIM47Q96LD4 TKT-202ENST00000423516 2075 ntTSL 2 BASIC17.63■□□□□ 0.41
TRIM47Q96LD4 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
TRIM47Q96LD4 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC17.63■□□□□ 0.41
TRIM47Q96LD4 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TRIM47Q96LD4 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
TRIM47Q96LD4 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TRIM47Q96LD4 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TRIM47Q96LD4 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
TRIM47Q96LD4 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC17.63■□□□□ 0.41
TRIM47Q96LD4 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TRIM47Q96LD4 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC17.63■□□□□ 0.41
TRIM47Q96LD4 ANXA6-202ENST00000377751 1430 ntTSL 2 BASIC17.63■□□□□ 0.41
TRIM47Q96LD4 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TRIM47Q96LD4 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC17.63■□□□□ 0.41
TRIM47Q96LD4 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
TRIM47Q96LD4 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
TRIM47Q96LD4 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 55.3 ms