Protein–RNA interactions for Protein: Q96JM3

CHAMP1, Chromosome alignment-maintaining phosphoprotein 1, humanhuman

Predictions only

Length 812 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHAMP1Q96JM3 CNN2-201ENST00000263097 2179 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CHAMP1Q96JM3 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CHAMP1Q96JM3 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CHAMP1Q96JM3 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CHAMP1Q96JM3 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CHAMP1Q96JM3 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CHAMP1Q96JM3 WBP4-201ENST00000379487 2623 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CHAMP1Q96JM3 SPDYE7P-202ENST00000420373 878 ntBASIC17.51■□□□□ 0.39
CHAMP1Q96JM3 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC17.51■□□□□ 0.39
CHAMP1Q96JM3 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC17.51■□□□□ 0.39
CHAMP1Q96JM3 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
CHAMP1Q96JM3 SLBP-205ENST00000488267 987 ntTSL 2 BASIC17.51■□□□□ 0.39
CHAMP1Q96JM3 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC17.51■□□□□ 0.39
CHAMP1Q96JM3 GAPDHP40-201ENST00000505218 1006 ntBASIC17.51■□□□□ 0.39
CHAMP1Q96JM3 SPOCK3-210ENST00000506886 2947 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
CHAMP1Q96JM3 AC022447.6-201ENST00000515522 438 ntBASIC17.51■□□□□ 0.39
CHAMP1Q96JM3 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC17.51■□□□□ 0.39
CHAMP1Q96JM3 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC17.51■□□□□ 0.39
CHAMP1Q96JM3 CNN2-205ENST00000562958 2194 ntTSL 2 BASIC17.51■□□□□ 0.39
CHAMP1Q96JM3 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC17.51■□□□□ 0.39
CHAMP1Q96JM3 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CHAMP1Q96JM3 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC17.51■□□□□ 0.39
CHAMP1Q96JM3 TEX48-202ENST00000612244 662 ntTSL 3 BASIC17.51■□□□□ 0.39
CHAMP1Q96JM3 MED12L-202ENST00000309237 2862 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
CHAMP1Q96JM3 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CHAMP1Q96JM3 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CHAMP1Q96JM3 GNAS-213ENST00000371099 3709 ntTSL 5 BASIC17.51■□□□□ 0.39
CHAMP1Q96JM3 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
CHAMP1Q96JM3 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC17.51■□□□□ 0.39
CHAMP1Q96JM3 PLA2G3-201ENST00000215885 2697 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CHAMP1Q96JM3 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
CHAMP1Q96JM3 PAK1-201ENST00000278568 2543 ntTSL 2 BASIC17.51■□□□□ 0.39
CHAMP1Q96JM3 APP-205ENST00000358918 2366 ntTSL 5 BASIC17.51■□□□□ 0.39
CHAMP1Q96JM3 PCDHB3-201ENST00000231130 3355 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
CHAMP1Q96JM3 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CHAMP1Q96JM3 AL359075.1-201ENST00000476232 2921 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CHAMP1Q96JM3 MINDY1-207ENST00000622754 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CHAMP1Q96JM3 TGM6-202ENST00000381423 2158 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CHAMP1Q96JM3 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC17.5■□□□□ 0.39
CHAMP1Q96JM3 LINC00863-201ENST00000439559 3287 ntTSL 5 BASIC17.5■□□□□ 0.39
CHAMP1Q96JM3 IQCE-216ENST00000611775 2289 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
CHAMP1Q96JM3 TGFBRAP1-201ENST00000258449 2827 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
CHAMP1Q96JM3 CALHM1-201ENST00000329905 3053 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CHAMP1Q96JM3 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC17.5■□□□□ 0.39
CHAMP1Q96JM3 TRPV6-201ENST00000359396 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
CHAMP1Q96JM3 PPP6R2-203ENST00000395741 3304 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
CHAMP1Q96JM3 LRRC8D-201ENST00000337338 3950 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
CHAMP1Q96JM3 SEZ6L-206ENST00000404234 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
CHAMP1Q96JM3 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CHAMP1Q96JM3 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CHAMP1Q96JM3 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
CHAMP1Q96JM3 METTL26-204ENST00000397665 558 ntTSL 2 BASIC17.5■□□□□ 0.39
CHAMP1Q96JM3 WRB-204ENST00000398753 699 ntTSL 3 BASIC17.5■□□□□ 0.39
CHAMP1Q96JM3 HLA-V-201ENST00000429037 534 ntBASIC17.5■□□□□ 0.39
CHAMP1Q96JM3 AC245100.3-201ENST00000441281 285 ntBASIC17.5■□□□□ 0.39
CHAMP1Q96JM3 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
CHAMP1Q96JM3 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC17.5■□□□□ 0.39
CHAMP1Q96JM3 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC17.5■□□□□ 0.39
CHAMP1Q96JM3 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC17.5■□□□□ 0.39
CHAMP1Q96JM3 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC17.5■□□□□ 0.39
CHAMP1Q96JM3 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC17.5■□□□□ 0.39
CHAMP1Q96JM3 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
CHAMP1Q96JM3 MIR4745-201ENST00000577608 62 ntBASIC17.5■□□□□ 0.39
CHAMP1Q96JM3 AL391069.4-201ENST00000609583 481 ntBASIC17.5■□□□□ 0.39
CHAMP1Q96JM3 AL008721.1-201ENST00000609964 604 ntBASIC17.5■□□□□ 0.39
CHAMP1Q96JM3 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC17.5■□□□□ 0.39
CHAMP1Q96JM3 AC105233.6-201ENST00000642093 218 ntBASIC17.5■□□□□ 0.39
CHAMP1Q96JM3 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC17.5■□□□□ 0.39
CHAMP1Q96JM3 ANO10-205ENST00000414522 2450 ntTSL 2 BASIC17.5■□□□□ 0.39
CHAMP1Q96JM3 RNF183-206ENST00000478815 2312 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
CHAMP1Q96JM3 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
CHAMP1Q96JM3 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC17.5■□□□□ 0.39
CHAMP1Q96JM3 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC17.5■□□□□ 0.39
CHAMP1Q96JM3 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC17.5■□□□□ 0.39
CHAMP1Q96JM3 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
CHAMP1Q96JM3 FBXO34-201ENST00000313833 3464 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CHAMP1Q96JM3 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
CHAMP1Q96JM3 AC018665.1-201ENST00000622927 1362 ntBASIC17.5■□□□□ 0.39
CHAMP1Q96JM3 IFITM10-201ENST00000340134 3706 ntAPPRIS P1 TSL 3 BASIC17.5■□□□□ 0.39
CHAMP1Q96JM3 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CHAMP1Q96JM3 HIF3A-202ENST00000244303 2250 ntTSL 2 BASIC17.5■□□□□ 0.39
CHAMP1Q96JM3 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC17.5■□□□□ 0.39
CHAMP1Q96JM3 MGC16275-201ENST00000499670 2501 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CHAMP1Q96JM3 TNIK-202ENST00000341852 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
CHAMP1Q96JM3 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
CHAMP1Q96JM3 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC17.5■□□□□ 0.39
CHAMP1Q96JM3 TRIM10-204ENST00000449742 3546 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CHAMP1Q96JM3 ZFP82-201ENST00000392161 2623 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CHAMP1Q96JM3 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
CHAMP1Q96JM3 LLGL1-201ENST00000316843 4260 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CHAMP1Q96JM3 RNF145-202ENST00000424310 3613 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CHAMP1Q96JM3 DBN1-203ENST00000393565 2701 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
CHAMP1Q96JM3 SFSWAP-210ENST00000541286 3219 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
CHAMP1Q96JM3 ANGPTL2-202ENST00000373425 3707 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CHAMP1Q96JM3 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CHAMP1Q96JM3 HYOU1-218ENST00000614668 1569 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CHAMP1Q96JM3 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CHAMP1Q96JM3 FUK-201ENST00000288078 4081 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CHAMP1Q96JM3 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
CHAMP1Q96JM3 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 50 ms