Protein–RNA interactions for Protein: Q96AA3

RFT1, Protein RFT1 homolog, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFT1Q96AA3 PHTF1-203ENST00000369600 3075 ntTSL 5 BASIC13.45□□□□□ -0.26
RFT1Q96AA3 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
RFT1Q96AA3 DNM1-212ENST00000627543 4734 ntAPPRIS ALT1 TSL 5 BASIC13.45□□□□□ -0.26
RFT1Q96AA3 PAPSS2-202ENST00000456849 3856 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
RFT1Q96AA3 LHX1-201ENST00000614239 3425 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
RFT1Q96AA3 HDAC11-213ENST00000437379 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
RFT1Q96AA3 PDXK-210ENST00000468090 7297 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
RFT1Q96AA3 FAM219A-203ENST00000379080 3591 ntTSL 2 BASIC13.45□□□□□ -0.26
RFT1Q96AA3 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC13.45□□□□□ -0.26
RFT1Q96AA3 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
RFT1Q96AA3 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
RFT1Q96AA3 MAGED4B-202ENST00000360134 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
RFT1Q96AA3 SIGLEC16-202ENST00000602139 2510 ntTSL 5 BASIC13.45□□□□□ -0.26
RFT1Q96AA3 ZNF133-203ENST00000377671 2701 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
RFT1Q96AA3 TMEM231-207ENST00000568377 2920 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
RFT1Q96AA3 AC099521.3-201ENST00000624251 2938 ntBASIC13.45□□□□□ -0.26
RFT1Q96AA3 AL031595.1-201ENST00000623969 4709 ntBASIC13.45□□□□□ -0.26
RFT1Q96AA3 SOX21-AS1-201ENST00000438290 3287 ntTSL 2 BASIC13.45□□□□□ -0.26
RFT1Q96AA3 CNOT3-201ENST00000221232 2852 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
RFT1Q96AA3 HNRNPH1-203ENST00000393432 2279 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
RFT1Q96AA3 DAAM2-202ENST00000398904 6224 ntAPPRIS ALT1 TSL 5 BASIC13.45□□□□□ -0.26
RFT1Q96AA3 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC13.45□□□□□ -0.26
RFT1Q96AA3 INTS1-201ENST00000404767 6959 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
RFT1Q96AA3 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC13.45□□□□□ -0.26
RFT1Q96AA3 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
RFT1Q96AA3 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
RFT1Q96AA3 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
RFT1Q96AA3 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC13.45□□□□□ -0.26
RFT1Q96AA3 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC13.45□□□□□ -0.26
RFT1Q96AA3 AL627223.1-201ENST00000416693 442 ntBASIC13.45□□□□□ -0.26
RFT1Q96AA3 AC136604.1-201ENST00000418535 575 ntBASIC13.45□□□□□ -0.26
RFT1Q96AA3 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC13.45□□□□□ -0.26
RFT1Q96AA3 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC13.45□□□□□ -0.26
RFT1Q96AA3 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC13.45□□□□□ -0.26
RFT1Q96AA3 CCND1-203ENST00000536559 553 ntTSL 3 BASIC13.45□□□□□ -0.26
RFT1Q96AA3 AC093520.2-201ENST00000561830 333 ntBASIC13.45□□□□□ -0.26
RFT1Q96AA3 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC13.45□□□□□ -0.26
RFT1Q96AA3 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC13.45□□□□□ -0.26
RFT1Q96AA3 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
RFT1Q96AA3 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC13.45□□□□□ -0.26
RFT1Q96AA3 THBS4-201ENST00000350881 3222 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
RFT1Q96AA3 ARHGEF17-201ENST00000263674 7853 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
RFT1Q96AA3 RNF44-201ENST00000274811 4155 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
RFT1Q96AA3 KIAA0141-201ENST00000194118 2203 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
RFT1Q96AA3 NHLH2-202ENST00000369506 7226 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
RFT1Q96AA3 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
RFT1Q96AA3 NEAT1-201ENST00000499732 1811 ntTSL 2 BASIC13.45□□□□□ -0.26
RFT1Q96AA3 HOXA3-201ENST00000317201 2761 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
RFT1Q96AA3 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
RFT1Q96AA3 SACM1L-201ENST00000389061 3723 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
RFT1Q96AA3 KLHL21-201ENST00000377658 4487 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
RFT1Q96AA3 SSTR1-201ENST00000267377 4295 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
RFT1Q96AA3 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
RFT1Q96AA3 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC13.45□□□□□ -0.26
RFT1Q96AA3 DDX31-204ENST00000372159 4577 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
RFT1Q96AA3 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
RFT1Q96AA3 KCNJ11-204ENST00000528731 2146 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
RFT1Q96AA3 PLAU-202ENST00000446342 2658 ntAPPRIS ALT2 TSL 2 BASIC13.45□□□□□ -0.26
RFT1Q96AA3 TMUB2-202ENST00000357984 1921 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
RFT1Q96AA3 PRSS16-203ENST00000421826 1949 ntTSL 2 BASIC13.45□□□□□ -0.26
RFT1Q96AA3 KIAA1217-203ENST00000376452 6052 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
RFT1Q96AA3 FANCG-201ENST00000378643 2631 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
RFT1Q96AA3 PLIN4-201ENST00000301286 6353 ntAPPRIS P2 TSL 5 BASIC13.44□□□□□ -0.26
RFT1Q96AA3 IMPDH1P4-201ENST00000445028 1534 ntBASIC13.44□□□□□ -0.26
RFT1Q96AA3 SLC19A1-201ENST00000311124 3811 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
RFT1Q96AA3 ITGB2-203ENST00000355153 2913 ntAPPRIS P1 TSL 2 BASIC13.44□□□□□ -0.26
RFT1Q96AA3 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
RFT1Q96AA3 PDE4DIP-227ENST00000529945 8824 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
RFT1Q96AA3 AJUBA-201ENST00000262713 4262 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
RFT1Q96AA3 NDUFC2-201ENST00000281031 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
RFT1Q96AA3 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC13.44□□□□□ -0.26
RFT1Q96AA3 PRAMEF25-202ENST00000619661 1840 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
RFT1Q96AA3 CAND2-201ENST00000295989 4429 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
RFT1Q96AA3 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC13.44□□□□□ -0.26
RFT1Q96AA3 CTIF-202ENST00000382998 4407 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
RFT1Q96AA3 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC13.44□□□□□ -0.26
RFT1Q96AA3 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC13.44□□□□□ -0.26
RFT1Q96AA3 DMPK-219ENST00000600757 3357 ntTSL 2 BASIC13.44□□□□□ -0.26
RFT1Q96AA3 MED22-209ENST00000610888 3867 ntAPPRIS ALT1 TSL 1 (best) BASIC13.44□□□□□ -0.26
RFT1Q96AA3 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
RFT1Q96AA3 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC13.44□□□□□ -0.26
RFT1Q96AA3 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
RFT1Q96AA3 AMT-224ENST00000635808 1610 ntTSL 5 BASIC13.44□□□□□ -0.26
RFT1Q96AA3 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC13.44□□□□□ -0.26
RFT1Q96AA3 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC13.44□□□□□ -0.26
RFT1Q96AA3 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
RFT1Q96AA3 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
RFT1Q96AA3 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
RFT1Q96AA3 RGS12-204ENST00000382788 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
RFT1Q96AA3 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
RFT1Q96AA3 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC13.44□□□□□ -0.26
RFT1Q96AA3 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC13.44□□□□□ -0.26
RFT1Q96AA3 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC13.44□□□□□ -0.26
RFT1Q96AA3 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC13.44□□□□□ -0.26
RFT1Q96AA3 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC13.44□□□□□ -0.26
RFT1Q96AA3 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC13.44□□□□□ -0.26
RFT1Q96AA3 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC13.44□□□□□ -0.26
RFT1Q96AA3 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC13.44□□□□□ -0.26
RFT1Q96AA3 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC13.44□□□□□ -0.26
RFT1Q96AA3 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC13.44□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms