Protein–RNA interactions for Protein: Q92499

DDX1, ATP-dependent RNA helicase DDX1, humanhuman

Known RBP Predictions only

Length 740 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX1Q92499 MS4A13-201ENST00000378185 808 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
DDX1Q92499 FAM21FP-201ENST00000426241 1131 ntBASIC16.03■□□□□ 0.16
DDX1Q92499 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC16.03■□□□□ 0.16
DDX1Q92499 AC018685.1-201ENST00000457813 368 ntTSL 3 BASIC16.03■□□□□ 0.16
DDX1Q92499 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC16.03■□□□□ 0.16
DDX1Q92499 AC093904.2-201ENST00000495580 418 ntTSL 3 BASIC16.03■□□□□ 0.16
DDX1Q92499 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC16.03■□□□□ 0.16
DDX1Q92499 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
DDX1Q92499 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC16.03■□□□□ 0.16
DDX1Q92499 ACYP1-206ENST00000555694 565 ntAPPRIS P1 TSL 3 BASIC16.03■□□□□ 0.16
DDX1Q92499 CMTM3-212ENST00000566121 572 ntTSL 3 BASIC16.03■□□□□ 0.16
DDX1Q92499 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC16.03■□□□□ 0.16
DDX1Q92499 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
DDX1Q92499 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
DDX1Q92499 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC16.03■□□□□ 0.16
DDX1Q92499 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC16.03■□□□□ 0.16
DDX1Q92499 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC16.03■□□□□ 0.16
DDX1Q92499 ORMDL3-202ENST00000394169 2230 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
DDX1Q92499 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
DDX1Q92499 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC16.03■□□□□ 0.16
DDX1Q92499 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
DDX1Q92499 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
DDX1Q92499 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
DDX1Q92499 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC16.03■□□□□ 0.16
DDX1Q92499 ATG5-201ENST00000343245 3092 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
DDX1Q92499 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
DDX1Q92499 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
DDX1Q92499 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
DDX1Q92499 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
DDX1Q92499 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC16.02■□□□□ 0.16
DDX1Q92499 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
DDX1Q92499 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
DDX1Q92499 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC16.02■□□□□ 0.16
DDX1Q92499 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
DDX1Q92499 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC16.02■□□□□ 0.16
DDX1Q92499 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC16.02■□□□□ 0.16
DDX1Q92499 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
DDX1Q92499 MAGED4B-202ENST00000360134 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
DDX1Q92499 ENO2-211ENST00000541477 2549 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
DDX1Q92499 AC004754.1-201ENST00000600536 2242 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
DDX1Q92499 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC16.02■□□□□ 0.16
DDX1Q92499 KRT8P35-201ENST00000483942 1338 ntBASIC16.02■□□□□ 0.16
DDX1Q92499 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC16.02■□□□□ 0.16
DDX1Q92499 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC16.02■□□□□ 0.16
DDX1Q92499 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
DDX1Q92499 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
DDX1Q92499 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC16.02■□□□□ 0.16
DDX1Q92499 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
DDX1Q92499 MDP1-202ENST00000396833 582 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
DDX1Q92499 AL162742.1-201ENST00000434792 954 ntTSL 2 BASIC16.02■□□□□ 0.16
DDX1Q92499 RPS24-203ENST00000435275 656 ntAPPRIS ALT1 TSL 2 BASIC16.02■□□□□ 0.16
DDX1Q92499 KLF2P4-201ENST00000451959 1225 ntBASIC16.02■□□□□ 0.16
DDX1Q92499 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC16.02■□□□□ 0.16
DDX1Q92499 RCN1-210ENST00000532942 1191 ntAPPRIS ALT2 TSL 2 BASIC16.02■□□□□ 0.16
DDX1Q92499 PLEKHB1-206ENST00000535129 1049 ntAPPRIS ALT1 TSL 2 BASIC16.02■□□□□ 0.16
DDX1Q92499 USB1-203ENST00000539737 1212 ntTSL 2 BASIC16.02■□□□□ 0.16
DDX1Q92499 AL133523.1-201ENST00000554537 331 ntTSL 3 BASIC16.02■□□□□ 0.16
DDX1Q92499 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
DDX1Q92499 RPS24-214ENST00000613865 538 ntTSL 5 BASIC16.02■□□□□ 0.16
DDX1Q92499 AL139099.5-201ENST00000635274 300 ntBASIC16.02■□□□□ 0.16
DDX1Q92499 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
DDX1Q92499 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.15
DDX1Q92499 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
DDX1Q92499 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
DDX1Q92499 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
DDX1Q92499 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.15
DDX1Q92499 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
DDX1Q92499 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
DDX1Q92499 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
DDX1Q92499 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
DDX1Q92499 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
DDX1Q92499 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC16.02■□□□□ 0.15
DDX1Q92499 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC16.02■□□□□ 0.15
DDX1Q92499 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.15
DDX1Q92499 TRMT1-201ENST00000221504 2179 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
DDX1Q92499 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
DDX1Q92499 BIRC5-203ENST00000374948 2446 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
DDX1Q92499 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
DDX1Q92499 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
DDX1Q92499 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC16.01■□□□□ 0.15
DDX1Q92499 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC16.01■□□□□ 0.15
DDX1Q92499 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
DDX1Q92499 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
DDX1Q92499 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
DDX1Q92499 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
DDX1Q92499 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
DDX1Q92499 ZNF576-203ENST00000525771 2327 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
DDX1Q92499 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC16.01■□□□□ 0.15
DDX1Q92499 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC16.01■□□□□ 0.15
DDX1Q92499 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC16.01■□□□□ 0.15
DDX1Q92499 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
DDX1Q92499 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
DDX1Q92499 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
DDX1Q92499 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
DDX1Q92499 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
DDX1Q92499 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
DDX1Q92499 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC16.01■□□□□ 0.15
DDX1Q92499 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
DDX1Q92499 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
DDX1Q92499 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 44.2 ms