Protein–RNA interactions for Protein: Q8N3P4

VPS8, Vacuolar protein sorting-associated protein 8 homolog, humanhuman

Predictions only

Length 1,428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8Q8N3P4 PAK1-201ENST00000278568 2543 ntTSL 2 BASIC23.17■■□□□ 1.3
VPS8Q8N3P4 CYTH1-201ENST00000361101 3311 ntAPPRIS ALT1 TSL 1 (best) BASIC23.17■■□□□ 1.3
VPS8Q8N3P4 CYTH1-202ENST00000446868 3311 ntAPPRIS ALT1 TSL 5 BASIC23.17■■□□□ 1.3
VPS8Q8N3P4 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
VPS8Q8N3P4 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
VPS8Q8N3P4 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC23.17■■□□□ 1.3
VPS8Q8N3P4 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
VPS8Q8N3P4 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
VPS8Q8N3P4 GK-204ENST00000378945 2063 ntAPPRIS P3 TSL 1 (best) BASIC23.17■■□□□ 1.3
VPS8Q8N3P4 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC23.17■■□□□ 1.3
VPS8Q8N3P4 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC23.17■■□□□ 1.3
VPS8Q8N3P4 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC23.17■■□□□ 1.3
VPS8Q8N3P4 SLC6A9-203ENST00000372306 1926 ntTSL 2 BASIC23.17■■□□□ 1.3
VPS8Q8N3P4 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
VPS8Q8N3P4 PLA2G5-201ENST00000375108 1161 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
VPS8Q8N3P4 TMEM52-203ENST00000378602 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC23.16■■□□□ 1.3
VPS8Q8N3P4 REEP1-202ENST00000453231 940 ntTSL 2 BASIC23.16■■□□□ 1.3
VPS8Q8N3P4 ARTN-209ENST00000479128 471 ntTSL 3 BASIC23.16■■□□□ 1.3
VPS8Q8N3P4 AC008406.1-201ENST00000509530 541 ntTSL 3 BASIC23.16■■□□□ 1.3
VPS8Q8N3P4 SCARNA21-201ENST00000517026 139 ntBASIC23.16■■□□□ 1.3
VPS8Q8N3P4 AC007376.2-201ENST00000556271 540 ntTSL 3 BASIC23.16■■□□□ 1.3
VPS8Q8N3P4 C14orf132-204ENST00000556728 774 ntAPPRIS P1 TSL 2 BASIC23.16■■□□□ 1.3
VPS8Q8N3P4 SNORD3B-2-202ENST00000571722 791 ntBASIC23.16■■□□□ 1.3
VPS8Q8N3P4 LINC01669-205ENST00000624561 713 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
VPS8Q8N3P4 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
VPS8Q8N3P4 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
VPS8Q8N3P4 CD68-202ENST00000380498 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC23.16■■□□□ 1.3
VPS8Q8N3P4 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC23.16■■□□□ 1.3
VPS8Q8N3P4 BRMS1-201ENST00000359957 1445 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
VPS8Q8N3P4 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
VPS8Q8N3P4 FAS-202ENST00000352159 1722 ntTSL 5 BASIC23.16■■□□□ 1.3
VPS8Q8N3P4 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC23.16■■□□□ 1.3
VPS8Q8N3P4 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC23.16■■□□□ 1.3
VPS8Q8N3P4 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC23.16■■□□□ 1.3
VPS8Q8N3P4 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC23.16■■□□□ 1.3
VPS8Q8N3P4 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
VPS8Q8N3P4 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC23.16■■□□□ 1.3
VPS8Q8N3P4 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
VPS8Q8N3P4 ABLIM2-209ENST00000505872 1680 ntAPPRIS ALT2 TSL 5 BASIC23.16■■□□□ 1.3
VPS8Q8N3P4 AC144522.1-201ENST00000625111 1658 ntBASIC23.16■■□□□ 1.3
VPS8Q8N3P4 LCMT1-203ENST00000399069 1368 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
VPS8Q8N3P4 SMARCE1-204ENST00000400122 1263 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
VPS8Q8N3P4 AL450469.2-201ENST00000427132 499 ntTSL 3 BASIC23.16■■□□□ 1.3
VPS8Q8N3P4 AL355994.3-201ENST00000437156 466 ntTSL 2 BASIC23.16■■□□□ 1.3
VPS8Q8N3P4 OR2R1P-201ENST00000441404 914 ntBASIC23.16■■□□□ 1.3
VPS8Q8N3P4 AKR7A2P1-201ENST00000460134 915 ntBASIC23.16■■□□□ 1.3
VPS8Q8N3P4 TCEAL4-208ENST00000472484 1273 ntAPPRIS P3 TSL 1 (best) BASIC23.16■■□□□ 1.3
VPS8Q8N3P4 AC005740.2-201ENST00000511085 419 ntBASIC23.16■■□□□ 1.3
VPS8Q8N3P4 IGHV3OR16-16-201ENST00000563644 343 ntBASIC23.16■■□□□ 1.3
VPS8Q8N3P4 SMARCE1-213ENST00000578044 1184 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
VPS8Q8N3P4 SMARCE1-216ENST00000580419 1228 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
VPS8Q8N3P4 AC127024.2-201ENST00000581019 789 ntTSL 5 BASIC23.16■■□□□ 1.3
VPS8Q8N3P4 ZNF586-206ENST00000599802 581 ntTSL 3 BASIC23.16■■□□□ 1.3
VPS8Q8N3P4 ZCCHC4-206ENST00000612982 938 ntTSL 5 BASIC23.16■■□□□ 1.3
VPS8Q8N3P4 AC133540.1-201ENST00000620845 1019 ntBASIC23.16■■□□□ 1.3
VPS8Q8N3P4 DDX5-235ENST00000630471 473 ntTSL 4 BASIC23.16■■□□□ 1.3
VPS8Q8N3P4 AC004706.3-207ENST00000634823 977 ntTSL 5 BASIC23.16■■□□□ 1.3
VPS8Q8N3P4 TPO-203ENST00000346956 2923 ntTSL 5 BASIC23.16■■□□□ 1.3
VPS8Q8N3P4 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC23.15■■□□□ 1.3
VPS8Q8N3P4 MAGEA4-205ENST00000393920 1721 ntAPPRIS P1 TSL 2 BASIC23.15■■□□□ 1.3
VPS8Q8N3P4 TMBIM1-201ENST00000258412 2371 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
VPS8Q8N3P4 CHIA-206ENST00000430615 1320 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
VPS8Q8N3P4 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC23.15■■□□□ 1.3
VPS8Q8N3P4 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
VPS8Q8N3P4 LRIF1-202ENST00000485275 1796 ntAPPRIS ALT2 TSL 2 BASIC23.15■■□□□ 1.3
VPS8Q8N3P4 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC23.15■■□□□ 1.3
VPS8Q8N3P4 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC23.15■■□□□ 1.3
VPS8Q8N3P4 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
VPS8Q8N3P4 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
VPS8Q8N3P4 GPSM3-209ENST00000487761 1460 ntTSL 5 BASIC23.15■■□□□ 1.3
VPS8Q8N3P4 AL390755.1-201ENST00000623716 2027 ntBASIC23.15■■□□□ 1.3
VPS8Q8N3P4 DNAI1-209ENST00000614641 2598 ntAPPRIS ALT2 TSL 5 BASIC23.15■■□□□ 1.3
VPS8Q8N3P4 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC23.15■■□□□ 1.3
VPS8Q8N3P4 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
VPS8Q8N3P4 PPP1R14B-202ENST00000392210 600 ntTSL 3 BASIC23.15■■□□□ 1.3
VPS8Q8N3P4 KRTAP2-4-201ENST00000394015 764 ntAPPRIS P1 BASIC23.15■■□□□ 1.3
VPS8Q8N3P4 TPT1P11-201ENST00000458482 498 ntBASIC23.15■■□□□ 1.3
VPS8Q8N3P4 UCHL1-207ENST00000508768 827 ntTSL 3 BASIC23.15■■□□□ 1.3
VPS8Q8N3P4 RBM8B-201ENST00000555532 525 ntBASIC23.15■■□□□ 1.3
VPS8Q8N3P4 AC103810.3-201ENST00000583567 96 ntBASIC23.15■■□□□ 1.3
VPS8Q8N3P4 AL157813.1-201ENST00000612996 587 ntBASIC23.15■■□□□ 1.3
VPS8Q8N3P4 AC244517.4-201ENST00000624549 580 ntTSL 4 BASIC23.15■■□□□ 1.3
VPS8Q8N3P4 SELPLG-202ENST00000388962 1613 ntAPPRIS ALT2 TSL 5 BASIC23.15■■□□□ 1.3
VPS8Q8N3P4 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC23.15■■□□□ 1.3
VPS8Q8N3P4 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
VPS8Q8N3P4 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
VPS8Q8N3P4 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
VPS8Q8N3P4 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC23.14■■□□□ 1.3
VPS8Q8N3P4 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC23.14■■□□□ 1.3
VPS8Q8N3P4 FXYD5-201ENST00000342879 1580 ntAPPRIS P2 TSL 1 (best) BASIC23.14■■□□□ 1.3
VPS8Q8N3P4 NFYC-215ENST00000456393 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC23.14■■□□□ 1.3
VPS8Q8N3P4 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC23.14■■□□□ 1.3
VPS8Q8N3P4 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC23.14■■□□□ 1.3
VPS8Q8N3P4 PRAMEF8-202ENST00000614831 1592 ntAPPRIS P1 TSL 5 BASIC23.14■■□□□ 1.3
VPS8Q8N3P4 PRAMEF7-202ENST00000616979 1592 ntAPPRIS P1 TSL 5 BASIC23.14■■□□□ 1.3
VPS8Q8N3P4 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC23.14■■□□□ 1.3
VPS8Q8N3P4 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
VPS8Q8N3P4 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
VPS8Q8N3P4 SPO11-203ENST00000371263 1834 ntAPPRIS P4 TSL 1 (best) BASIC23.14■■□□□ 1.3
VPS8Q8N3P4 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC23.14■■□□□ 1.29
Retrieved 100 of 98,524 protein–RNA pairs in 71 ms