Protein–RNA interactions for Protein: Q8N196

SIX5, Homeobox protein SIX5, humanhuman

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX5Q8N196 AC242376.1-201ENST00000559033 726 ntBASIC15.48■□□□□ 0.07
SIX5Q8N196 CDIP1-202ENST00000562334 1205 ntTSL 2 BASIC15.48■□□□□ 0.07
SIX5Q8N196 AL445483.1-201ENST00000568695 736 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
SIX5Q8N196 AL162426.1-201ENST00000624141 743 ntBASIC15.48■□□□□ 0.07
SIX5Q8N196 CDK7-214ENST00000626796 358 ntTSL 5 BASIC15.48■□□□□ 0.07
SIX5Q8N196 CDK7-215ENST00000629350 1149 ntTSL 5 BASIC15.48■□□□□ 0.07
SIX5Q8N196 PCBP2-OT1-201ENST00000634357 590 ntBASIC15.48■□□□□ 0.07
SIX5Q8N196 NAP1L6-202ENST00000641404 1222 ntBASIC15.48■□□□□ 0.07
SIX5Q8N196 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
SIX5Q8N196 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
SIX5Q8N196 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC15.48■□□□□ 0.07
SIX5Q8N196 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
SIX5Q8N196 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
SIX5Q8N196 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC15.48■□□□□ 0.07
SIX5Q8N196 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
SIX5Q8N196 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC15.48■□□□□ 0.07
SIX5Q8N196 RUNX1T1-251ENST00000615601 7372 ntAPPRIS ALT1 TSL 5 BASIC15.48■□□□□ 0.07
SIX5Q8N196 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
SIX5Q8N196 DSE-202ENST00000359564 4037 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
SIX5Q8N196 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC15.48■□□□□ 0.07
SIX5Q8N196 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
SIX5Q8N196 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
SIX5Q8N196 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
SIX5Q8N196 PLAG1-203ENST00000429357 1899 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
SIX5Q8N196 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
SIX5Q8N196 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
SIX5Q8N196 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
SIX5Q8N196 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC15.48■□□□□ 0.07
SIX5Q8N196 PCNX1-202ENST00000439984 6988 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
SIX5Q8N196 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
SIX5Q8N196 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
SIX5Q8N196 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC15.47■□□□□ 0.07
SIX5Q8N196 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC15.47■□□□□ 0.07
SIX5Q8N196 ST6GAL2-204ENST00000409382 7275 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
SIX5Q8N196 DMTN-201ENST00000265800 2554 ntTSL 5 BASIC15.47■□□□□ 0.07
SIX5Q8N196 DMTN-207ENST00000517305 2551 ntTSL 5 BASIC15.47■□□□□ 0.07
SIX5Q8N196 CLUHP2-201ENST00000426660 1303 ntBASIC15.47■□□□□ 0.07
SIX5Q8N196 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
SIX5Q8N196 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
SIX5Q8N196 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
SIX5Q8N196 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
SIX5Q8N196 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
SIX5Q8N196 AC055811.4-201ENST00000624039 1754 ntBASIC15.47■□□□□ 0.07
SIX5Q8N196 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
SIX5Q8N196 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
SIX5Q8N196 TPM1-202ENST00000288398 1295 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
SIX5Q8N196 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
SIX5Q8N196 ALG1L-201ENST00000340333 805 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
SIX5Q8N196 RN7SKP214-201ENST00000364208 315 ntBASIC15.47■□□□□ 0.07
SIX5Q8N196 MRPL43-206ENST00000370236 866 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
SIX5Q8N196 MRPL43-207ENST00000370241 824 ntTSL 5 BASIC15.47■□□□□ 0.07
SIX5Q8N196 NRM-202ENST00000376420 1228 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
SIX5Q8N196 IGHV3-49-201ENST00000390625 439 ntAPPRIS P1 BASIC15.47■□□□□ 0.07
SIX5Q8N196 DNAJB1P1-201ENST00000429417 1024 ntBASIC15.47■□□□□ 0.07
SIX5Q8N196 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC15.47■□□□□ 0.07
SIX5Q8N196 NEU3-205ENST00000531619 582 ntTSL 5 BASIC15.47■□□□□ 0.07
SIX5Q8N196 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC15.47■□□□□ 0.07
SIX5Q8N196 MIR4683-201ENST00000579659 81 ntBASIC15.47■□□□□ 0.07
SIX5Q8N196 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC15.47■□□□□ 0.07
SIX5Q8N196 IRF3-215ENST00000596822 823 ntTSL 3 BASIC15.47■□□□□ 0.07
SIX5Q8N196 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
SIX5Q8N196 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC15.47■□□□□ 0.07
SIX5Q8N196 AP000229.1-202ENST00000609365 559 ntTSL 4 BASIC15.47■□□□□ 0.07
SIX5Q8N196 ALG1L-202ENST00000611639 701 ntAPPRIS ALT2 TSL 3 BASIC15.47■□□□□ 0.07
SIX5Q8N196 AL136301.1-201ENST00000615830 422 ntBASIC15.47■□□□□ 0.07
SIX5Q8N196 LINC01517-203ENST00000616194 908 ntTSL 5 BASIC15.47■□□□□ 0.07
SIX5Q8N196 AP001065.2-201ENST00000617205 644 ntBASIC15.47■□□□□ 0.07
SIX5Q8N196 AC009084.3-201ENST00000623356 437 ntBASIC15.47■□□□□ 0.07
SIX5Q8N196 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
SIX5Q8N196 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
SIX5Q8N196 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC15.47■□□□□ 0.07
SIX5Q8N196 CFAP36-201ENST00000339012 1373 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
SIX5Q8N196 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
SIX5Q8N196 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
SIX5Q8N196 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC15.47■□□□□ 0.07
SIX5Q8N196 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
SIX5Q8N196 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
SIX5Q8N196 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
SIX5Q8N196 C11orf16-201ENST00000326053 1908 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
SIX5Q8N196 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
SIX5Q8N196 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC15.47■□□□□ 0.07
SIX5Q8N196 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
SIX5Q8N196 MAP3K12-201ENST00000267079 4319 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
SIX5Q8N196 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
SIX5Q8N196 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
SIX5Q8N196 CXorf40B-202ENST00000370404 1316 ntAPPRIS P2 TSL 2 BASIC15.46■□□□□ 0.07
SIX5Q8N196 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.07
SIX5Q8N196 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
SIX5Q8N196 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
SIX5Q8N196 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
SIX5Q8N196 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
SIX5Q8N196 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC15.46■□□□□ 0.07
SIX5Q8N196 CICP4-201ENST00000447359 2812 ntBASIC15.46■□□□□ 0.07
SIX5Q8N196 ITSN1-210ENST00000399353 3913 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
SIX5Q8N196 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
SIX5Q8N196 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
SIX5Q8N196 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
SIX5Q8N196 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
SIX5Q8N196 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
SIX5Q8N196 IL9-201ENST00000274520 591 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 76.3 ms