Protein–RNA interactions for Protein: Q8IYR6

TMEFF1, Tomoregulin-1, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEFF1Q8IYR6 AL137783.1-201ENST00000623494 1896 ntBASIC14.91□□□□□ -0.02
TMEFF1Q8IYR6 PLA1A-205ENST00000494440 1775 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
TMEFF1Q8IYR6 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC14.91□□□□□ -0.02
TMEFF1Q8IYR6 ATP6V0E2-207ENST00000479613 1666 ntTSL 2 BASIC14.91□□□□□ -0.02
TMEFF1Q8IYR6 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
TMEFF1Q8IYR6 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
TMEFF1Q8IYR6 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
TMEFF1Q8IYR6 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
TMEFF1Q8IYR6 NUDT1-201ENST00000339737 698 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
TMEFF1Q8IYR6 ALG1L-201ENST00000340333 805 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
TMEFF1Q8IYR6 TCL1B-201ENST00000340722 1166 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
TMEFF1Q8IYR6 NUDT1-202ENST00000343985 771 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
TMEFF1Q8IYR6 FBXO44-203ENST00000376760 822 ntTSL 2 BASIC14.91□□□□□ -0.02
TMEFF1Q8IYR6 AK6-201ENST00000380818 1183 ntTSL 2 BASIC14.91□□□□□ -0.02
TMEFF1Q8IYR6 PEX13-203ENST00000414712 1014 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
TMEFF1Q8IYR6 MIR663AHG-201ENST00000427348 1213 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
TMEFF1Q8IYR6 PDIA3P2-201ENST00000428073 158 ntBASIC14.91□□□□□ -0.02
TMEFF1Q8IYR6 FGFR3P1-201ENST00000449999 601 ntBASIC14.91□□□□□ -0.02
TMEFF1Q8IYR6 CEP164P1-201ENST00000455142 418 ntBASIC14.91□□□□□ -0.02
TMEFF1Q8IYR6 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
TMEFF1Q8IYR6 AC116345.2-201ENST00000512837 523 ntBASIC14.91□□□□□ -0.02
TMEFF1Q8IYR6 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC14.91□□□□□ -0.02
TMEFF1Q8IYR6 AC015689.1-201ENST00000525365 462 ntTSL 2 BASIC14.91□□□□□ -0.02
TMEFF1Q8IYR6 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC14.91□□□□□ -0.02
TMEFF1Q8IYR6 AHNAK-205ENST00000530124 701 ntAPPRIS ALT2 TSL 3 BASIC14.91□□□□□ -0.02
TMEFF1Q8IYR6 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC14.91□□□□□ -0.02
TMEFF1Q8IYR6 ORAOV1-211ENST00000542341 775 ntTSL 2 BASIC14.91□□□□□ -0.02
TMEFF1Q8IYR6 SNORD3B-2-202ENST00000571722 791 ntBASIC14.91□□□□□ -0.02
TMEFF1Q8IYR6 AL645941.3-201ENST00000580587 577 ntTSL 4 BASIC14.91□□□□□ -0.02
TMEFF1Q8IYR6 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
TMEFF1Q8IYR6 ALG1L-202ENST00000611639 701 ntAPPRIS ALT2 TSL 3 BASIC14.91□□□□□ -0.02
TMEFF1Q8IYR6 AP003419.4-201ENST00000616071 517 ntBASIC14.91□□□□□ -0.02
TMEFF1Q8IYR6 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC14.91□□□□□ -0.02
TMEFF1Q8IYR6 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC14.91□□□□□ -0.02
TMEFF1Q8IYR6 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC14.91□□□□□ -0.02
TMEFF1Q8IYR6 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC14.91□□□□□ -0.02
TMEFF1Q8IYR6 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC14.91□□□□□ -0.02
TMEFF1Q8IYR6 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC14.91□□□□□ -0.02
TMEFF1Q8IYR6 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
TMEFF1Q8IYR6 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
TMEFF1Q8IYR6 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
TMEFF1Q8IYR6 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
TMEFF1Q8IYR6 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
TMEFF1Q8IYR6 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
TMEFF1Q8IYR6 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC14.91□□□□□ -0.02
TMEFF1Q8IYR6 DNASE1L2-204ENST00000567494 1301 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
TMEFF1Q8IYR6 KLK11-207ENST00000594768 1347 ntAPPRIS P4 TSL 1 (best) BASIC14.91□□□□□ -0.02
TMEFF1Q8IYR6 AL359258.3-201ENST00000622910 2331 ntBASIC14.91□□□□□ -0.02
TMEFF1Q8IYR6 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
TMEFF1Q8IYR6 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TMEFF1Q8IYR6 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
TMEFF1Q8IYR6 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TMEFF1Q8IYR6 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
TMEFF1Q8IYR6 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
TMEFF1Q8IYR6 ELAVL1-205ENST00000596459 1473 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
TMEFF1Q8IYR6 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC14.9□□□□□ -0.02
TMEFF1Q8IYR6 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC14.9□□□□□ -0.02
TMEFF1Q8IYR6 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
TMEFF1Q8IYR6 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
TMEFF1Q8IYR6 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC14.9□□□□□ -0.02
TMEFF1Q8IYR6 SNHG1-213ENST00000540725 1374 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
TMEFF1Q8IYR6 MAGEA1-201ENST00000356661 1710 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TMEFF1Q8IYR6 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC14.9□□□□□ -0.02
TMEFF1Q8IYR6 OR1J1-201ENST00000259357 969 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
TMEFF1Q8IYR6 SPDYE4-201ENST00000328794 923 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TMEFF1Q8IYR6 DMAC2-203ENST00000417807 1065 ntTSL 2 BASIC14.9□□□□□ -0.02
TMEFF1Q8IYR6 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC14.9□□□□□ -0.02
TMEFF1Q8IYR6 MDH2-205ENST00000461263 648 ntTSL 2 BASIC14.9□□□□□ -0.02
TMEFF1Q8IYR6 ATP6V1G2-210ENST00000483251 662 ntTSL 3 BASIC14.9□□□□□ -0.02
TMEFF1Q8IYR6 AC093627.5-203ENST00000497320 746 ntTSL 2 BASIC14.9□□□□□ -0.02
TMEFF1Q8IYR6 RCC2P8-201ENST00000502779 1035 ntBASIC14.9□□□□□ -0.02
TMEFF1Q8IYR6 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC14.9□□□□□ -0.02
TMEFF1Q8IYR6 EEF1D-218ENST00000526838 926 ntAPPRIS ALT2 TSL 2 BASIC14.9□□□□□ -0.02
TMEFF1Q8IYR6 AC117500.3-201ENST00000537032 666 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
TMEFF1Q8IYR6 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
TMEFF1Q8IYR6 AC011825.3-201ENST00000583184 565 ntTSL 5 BASIC14.9□□□□□ -0.02
TMEFF1Q8IYR6 MIR4750-201ENST00000584564 56 ntBASIC14.9□□□□□ -0.02
TMEFF1Q8IYR6 AC008805.1-201ENST00000590892 364 ntBASIC14.9□□□□□ -0.02
TMEFF1Q8IYR6 AC011498.6-201ENST00000592034 510 ntTSL 5 BASIC14.9□□□□□ -0.02
TMEFF1Q8IYR6 COX10-AS1-206ENST00000602743 576 ntTSL 5 BASIC14.9□□□□□ -0.02
TMEFF1Q8IYR6 Metazoa_SRP.65-201ENST00000615602 264 ntBASIC14.9□□□□□ -0.02
TMEFF1Q8IYR6 LINC01517-203ENST00000616194 908 ntTSL 5 BASIC14.9□□□□□ -0.02
TMEFF1Q8IYR6 NR2F2-AS1-215ENST00000620029 1223 ntTSL 5 BASIC14.9□□□□□ -0.02
TMEFF1Q8IYR6 AMT-204ENST00000427987 1646 ntTSL 5 BASIC14.9□□□□□ -0.02
TMEFF1Q8IYR6 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TMEFF1Q8IYR6 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
TMEFF1Q8IYR6 ABR-203ENST00000536794 2213 ntTSL 2 BASIC14.9□□□□□ -0.02
TMEFF1Q8IYR6 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC14.9□□□□□ -0.02
TMEFF1Q8IYR6 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TMEFF1Q8IYR6 AC011840.2-201ENST00000563063 1520 ntBASIC14.9□□□□□ -0.02
TMEFF1Q8IYR6 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
TMEFF1Q8IYR6 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
TMEFF1Q8IYR6 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
TMEFF1Q8IYR6 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC14.9□□□□□ -0.02
TMEFF1Q8IYR6 HLA-DQB2-231ENST00000435145 2026 ntBASIC14.9□□□□□ -0.02
TMEFF1Q8IYR6 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
TMEFF1Q8IYR6 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TMEFF1Q8IYR6 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TMEFF1Q8IYR6 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
TMEFF1Q8IYR6 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC14.9□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 81.6 ms