Protein–RNA interactions for Protein: Q86Y39

NDUFA11, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 11, humanhuman

Predictions only

Length 141 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA11Q86Y39 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
NDUFA11Q86Y39 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
NDUFA11Q86Y39 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC11.72□□□□□ -0.53
NDUFA11Q86Y39 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
NDUFA11Q86Y39 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC11.72□□□□□ -0.53
NDUFA11Q86Y39 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
NDUFA11Q86Y39 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
NDUFA11Q86Y39 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
NDUFA11Q86Y39 LINC00658-202ENST00000420529 1542 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
NDUFA11Q86Y39 ZNF750-202ENST00000572562 1513 ntTSL 2 BASIC11.72□□□□□ -0.53
NDUFA11Q86Y39 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
NDUFA11Q86Y39 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
NDUFA11Q86Y39 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC11.72□□□□□ -0.53
NDUFA11Q86Y39 FAM153A-220ENST00000513554 1437 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
NDUFA11Q86Y39 MAPK14-204ENST00000468133 1376 ntTSL 2 BASIC11.72□□□□□ -0.53
NDUFA11Q86Y39 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
NDUFA11Q86Y39 POU2F2-207ENST00000529067 2657 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
NDUFA11Q86Y39 CALM1-216ENST00000626705 1341 ntTSL 5 BASIC11.72□□□□□ -0.53
NDUFA11Q86Y39 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC11.72□□□□□ -0.53
NDUFA11Q86Y39 HIST2H2AA3-201ENST00000369159 549 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
NDUFA11Q86Y39 CLIC1-206ENST00000375779 1127 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
NDUFA11Q86Y39 RPL13A-201ENST00000391857 1181 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
NDUFA11Q86Y39 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
NDUFA11Q86Y39 AL662890.1-201ENST00000396818 632 ntBASIC11.72□□□□□ -0.53
NDUFA11Q86Y39 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC11.72□□□□□ -0.53
NDUFA11Q86Y39 AC092506.1-202ENST00000401022 528 ntBASIC11.72□□□□□ -0.53
NDUFA11Q86Y39 AL136309.1-201ENST00000403917 691 ntBASIC11.72□□□□□ -0.53
NDUFA11Q86Y39 MEMO1-204ENST00000407893 682 ntTSL 5 BASIC11.72□□□□□ -0.53
NDUFA11Q86Y39 AL008707.1-201ENST00000422498 534 ntBASIC11.72□□□□□ -0.53
NDUFA11Q86Y39 HNRNPA1P63-201ENST00000427917 963 ntBASIC11.72□□□□□ -0.53
NDUFA11Q86Y39 C9orf116-205ENST00000429260 678 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
NDUFA11Q86Y39 MRPS25-203ENST00000444840 1281 ntTSL 2 BASIC11.72□□□□□ -0.53
NDUFA11Q86Y39 RPL27A-202ENST00000524496 558 ntTSL 3 BASIC11.72□□□□□ -0.53
NDUFA11Q86Y39 NEU3-202ENST00000526068 431 ntTSL 2 BASIC11.72□□□□□ -0.53
NDUFA11Q86Y39 AL163636.1-201ENST00000554286 915 ntTSL 5 BASIC11.72□□□□□ -0.53
NDUFA11Q86Y39 ARL16-210ENST00000574938 751 ntTSL 2 BASIC11.72□□□□□ -0.53
NDUFA11Q86Y39 NDUFV2P1-201ENST00000596415 907 ntBASIC11.72□□□□□ -0.53
NDUFA11Q86Y39 LINC01233-203ENST00000601708 494 ntTSL 3 BASIC11.72□□□□□ -0.53
NDUFA11Q86Y39 IFITM3-204ENST00000602735 713 ntAPPRIS ALT1 TSL 5 BASIC11.72□□□□□ -0.53
NDUFA11Q86Y39 AC073413.1-201ENST00000603927 732 ntBASIC11.72□□□□□ -0.53
NDUFA11Q86Y39 HIST2H2AA4-201ENST00000607355 564 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
NDUFA11Q86Y39 AC138649.2-201ENST00000615886 705 ntBASIC11.72□□□□□ -0.53
NDUFA11Q86Y39 PRRC2B-210ENST00000638390 1084 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
NDUFA11Q86Y39 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC11.72□□□□□ -0.53
NDUFA11Q86Y39 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
NDUFA11Q86Y39 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
NDUFA11Q86Y39 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
NDUFA11Q86Y39 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
NDUFA11Q86Y39 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
NDUFA11Q86Y39 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
NDUFA11Q86Y39 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
NDUFA11Q86Y39 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC11.72□□□□□ -0.53
NDUFA11Q86Y39 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
NDUFA11Q86Y39 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
NDUFA11Q86Y39 MYO3A-201ENST00000265944 5581 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
NDUFA11Q86Y39 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
NDUFA11Q86Y39 RCN2-203ENST00000394885 6347 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
NDUFA11Q86Y39 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
NDUFA11Q86Y39 AC055811.4-201ENST00000624039 1754 ntBASIC11.72□□□□□ -0.53
NDUFA11Q86Y39 CYLD-202ENST00000398568 3536 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
NDUFA11Q86Y39 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
NDUFA11Q86Y39 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
NDUFA11Q86Y39 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
NDUFA11Q86Y39 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC11.71□□□□□ -0.53
NDUFA11Q86Y39 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
NDUFA11Q86Y39 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC11.71□□□□□ -0.53
NDUFA11Q86Y39 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
NDUFA11Q86Y39 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
NDUFA11Q86Y39 ZBTB45P1-201ENST00000452761 1456 ntBASIC11.71□□□□□ -0.53
NDUFA11Q86Y39 KRT8P4-201ENST00000509735 1454 ntBASIC11.71□□□□□ -0.53
NDUFA11Q86Y39 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC11.71□□□□□ -0.53
NDUFA11Q86Y39 ABHD18-206ENST00000611882 1493 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
NDUFA11Q86Y39 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
NDUFA11Q86Y39 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
NDUFA11Q86Y39 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
NDUFA11Q86Y39 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC11.71□□□□□ -0.53
NDUFA11Q86Y39 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC11.71□□□□□ -0.53
NDUFA11Q86Y39 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
NDUFA11Q86Y39 HLA-DQB2-231ENST00000435145 2026 ntBASIC11.71□□□□□ -0.53
NDUFA11Q86Y39 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
NDUFA11Q86Y39 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
NDUFA11Q86Y39 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
NDUFA11Q86Y39 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC11.71□□□□□ -0.53
NDUFA11Q86Y39 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC11.71□□□□□ -0.53
NDUFA11Q86Y39 BLCAP-204ENST00000397135 685 ntAPPRIS P1 TSL 4 BASIC11.71□□□□□ -0.53
NDUFA11Q86Y39 MCFD2-204ENST00000409207 1113 ntAPPRIS P1 TSL 2 BASIC11.71□□□□□ -0.53
NDUFA11Q86Y39 SAP30L-202ENST00000426761 777 ntTSL 3 BASIC11.71□□□□□ -0.53
NDUFA11Q86Y39 AL450469.2-201ENST00000427132 499 ntTSL 3 BASIC11.71□□□□□ -0.53
NDUFA11Q86Y39 RGS5-214ENST00000429865 754 ntTSL 3 BASIC11.71□□□□□ -0.53
NDUFA11Q86Y39 H2AFV-206ENST00000437072 589 ntTSL 4 BASIC11.71□□□□□ -0.53
NDUFA11Q86Y39 AL161719.1-201ENST00000442716 385 ntTSL 5 BASIC11.71□□□□□ -0.53
NDUFA11Q86Y39 USE1-202ENST00000445667 795 ntAPPRIS ALT1 TSL 5 BASIC11.71□□□□□ -0.53
NDUFA11Q86Y39 AC005077.2-201ENST00000449786 690 ntBASIC11.71□□□□□ -0.53
NDUFA11Q86Y39 EIF4HP1-201ENST00000453115 687 ntBASIC11.71□□□□□ -0.53
NDUFA11Q86Y39 GDNF-AS1-201ENST00000503382 604 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
NDUFA11Q86Y39 AL391280.1-201ENST00000506969 1062 ntBASIC11.71□□□□□ -0.53
NDUFA11Q86Y39 CDKN2AIP-205ENST00000510928 860 ntTSL 2 BASIC11.71□□□□□ -0.53
NDUFA11Q86Y39 AC005920.3-202ENST00000512717 789 ntTSL 3 BASIC11.71□□□□□ -0.53
NDUFA11Q86Y39 AC005833.2-201ENST00000527518 1249 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
NDUFA11Q86Y39 AC007406.3-201ENST00000537295 1063 ntTSL 2 BASIC11.71□□□□□ -0.53
Retrieved 100 of 98,524 protein–RNA pairs in 134.2 ms