Protein–RNA interactions for Protein: Q86UE6

LRRTM1, Leucine-rich repeat transmembrane neuronal protein 1, humanhuman

Predictions only

Length 522 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM1Q86UE6 RAD18-205ENST00000421052 582 ntTSL 3 BASIC13.15□□□□□ -0.3
LRRTM1Q86UE6 FDX1P1-201ENST00000449115 551 ntBASIC13.15□□□□□ -0.3
LRRTM1Q86UE6 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC13.15□□□□□ -0.3
LRRTM1Q86UE6 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC13.15□□□□□ -0.3
LRRTM1Q86UE6 AC000095.1-201ENST00000603208 874 ntBASIC13.15□□□□□ -0.3
LRRTM1Q86UE6 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
LRRTM1Q86UE6 MICB-201ENST00000252229 2446 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
LRRTM1Q86UE6 THBS4-201ENST00000350881 3222 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
LRRTM1Q86UE6 PBXIP1-202ENST00000368463 3212 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
LRRTM1Q86UE6 CERKL-206ENST00000410087 3208 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
LRRTM1Q86UE6 IFNAR2-202ENST00000342136 2899 ntAPPRIS P4 TSL 1 (best) BASIC13.15□□□□□ -0.3
LRRTM1Q86UE6 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
LRRTM1Q86UE6 HDAC9-208ENST00000417496 2524 ntTSL 2 BASIC13.15□□□□□ -0.3
LRRTM1Q86UE6 RET-201ENST00000340058 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
LRRTM1Q86UE6 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC13.15□□□□□ -0.3
LRRTM1Q86UE6 ZW10-201ENST00000200135 2992 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
LRRTM1Q86UE6 DDX20-201ENST00000369702 4212 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
LRRTM1Q86UE6 DCUN1D4-202ENST00000381441 4207 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
LRRTM1Q86UE6 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
LRRTM1Q86UE6 CDH20-201ENST00000262717 3882 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
LRRTM1Q86UE6 TNRC18-203ENST00000399537 10572 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
LRRTM1Q86UE6 TNRC18-205ENST00000430969 10562 ntAPPRIS P2 TSL 5 BASIC13.15□□□□□ -0.3
LRRTM1Q86UE6 RGS3-208ENST00000394646 2716 ntTSL 2 BASIC13.15□□□□□ -0.3
LRRTM1Q86UE6 PDE4A-209ENST00000592685 2707 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
LRRTM1Q86UE6 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
LRRTM1Q86UE6 FAM219A-209ENST00000445726 3644 ntAPPRIS ALT1 TSL 2 BASIC13.15□□□□□ -0.3
LRRTM1Q86UE6 PI4K2A-201ENST00000370631 4189 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
LRRTM1Q86UE6 MARC1-201ENST00000366910 7439 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
LRRTM1Q86UE6 YTHDF2-201ENST00000373812 2925 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
LRRTM1Q86UE6 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC13.15□□□□□ -0.3
LRRTM1Q86UE6 UBTF-205ENST00000526094 2459 ntTSL 5 BASIC13.15□□□□□ -0.3
LRRTM1Q86UE6 P2RY1-201ENST00000305097 6747 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
LRRTM1Q86UE6 GAS2L2-202ENST00000604641 3014 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
LRRTM1Q86UE6 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC13.15□□□□□ -0.31
LRRTM1Q86UE6 ADGRB2-205ENST00000398547 4857 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
LRRTM1Q86UE6 SH3BP5L-201ENST00000366472 3861 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
LRRTM1Q86UE6 SYNRG-231ENST00000622045 3859 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
LRRTM1Q86UE6 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC13.14□□□□□ -0.31
LRRTM1Q86UE6 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
LRRTM1Q86UE6 KDM6B-201ENST00000254846 6713 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
LRRTM1Q86UE6 TTC28-AS1-212ENST00000433317 3080 ntTSL 5 BASIC13.14□□□□□ -0.31
LRRTM1Q86UE6 AL357054.3-201ENST00000607084 2055 ntTSL 5 BASIC13.14□□□□□ -0.31
LRRTM1Q86UE6 MBD1-201ENST00000269468 3259 ntAPPRIS P3 TSL 5 BASIC13.14□□□□□ -0.31
LRRTM1Q86UE6 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC13.14□□□□□ -0.31
LRRTM1Q86UE6 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC13.14□□□□□ -0.31
LRRTM1Q86UE6 CETN4P-206ENST00000642099 2168 ntBASIC13.14□□□□□ -0.31
LRRTM1Q86UE6 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
LRRTM1Q86UE6 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
LRRTM1Q86UE6 MAPKAP1-204ENST00000373498 3131 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
LRRTM1Q86UE6 MBD4-201ENST00000249910 2470 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
LRRTM1Q86UE6 PCDHB14-201ENST00000239449 4828 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
LRRTM1Q86UE6 CCDC186-202ENST00000369286 1928 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
LRRTM1Q86UE6 ABAT-203ENST00000425191 1923 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
LRRTM1Q86UE6 LINC00479-201ENST00000412102 2033 ntTSL 2 BASIC13.14□□□□□ -0.31
LRRTM1Q86UE6 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
LRRTM1Q86UE6 STOM-202ENST00000347359 870 ntTSL 2 BASIC13.14□□□□□ -0.31
LRRTM1Q86UE6 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
LRRTM1Q86UE6 TEX30-205ENST00000376029 959 ntTSL 2 BASIC13.14□□□□□ -0.31
LRRTM1Q86UE6 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
LRRTM1Q86UE6 AC004461.1-201ENST00000412461 403 ntBASIC13.14□□□□□ -0.31
LRRTM1Q86UE6 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC13.14□□□□□ -0.31
LRRTM1Q86UE6 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC13.14□□□□□ -0.31
LRRTM1Q86UE6 CEND1P1-201ENST00000451006 455 ntBASIC13.14□□□□□ -0.31
LRRTM1Q86UE6 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC13.14□□□□□ -0.31
LRRTM1Q86UE6 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
LRRTM1Q86UE6 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC13.14□□□□□ -0.31
LRRTM1Q86UE6 PGAM5P1-201ENST00000518923 814 ntBASIC13.14□□□□□ -0.31
LRRTM1Q86UE6 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC13.14□□□□□ -0.31
LRRTM1Q86UE6 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC13.14□□□□□ -0.31
LRRTM1Q86UE6 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC13.14□□□□□ -0.31
LRRTM1Q86UE6 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC13.14□□□□□ -0.31
LRRTM1Q86UE6 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC13.14□□□□□ -0.31
LRRTM1Q86UE6 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
LRRTM1Q86UE6 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC13.14□□□□□ -0.31
LRRTM1Q86UE6 AC074044.1-201ENST00000609673 707 ntBASIC13.14□□□□□ -0.31
LRRTM1Q86UE6 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC13.14□□□□□ -0.31
LRRTM1Q86UE6 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC13.14□□□□□ -0.31
LRRTM1Q86UE6 PEX5L-211ENST00000472994 2235 ntAPPRIS ALT2 TSL 2 BASIC13.14□□□□□ -0.31
LRRTM1Q86UE6 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC13.14□□□□□ -0.31
LRRTM1Q86UE6 HNRNPU-226ENST00000640218 6858 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
LRRTM1Q86UE6 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
LRRTM1Q86UE6 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC13.14□□□□□ -0.31
LRRTM1Q86UE6 GALNT3-201ENST00000392701 3868 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
LRRTM1Q86UE6 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC13.14□□□□□ -0.31
LRRTM1Q86UE6 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
LRRTM1Q86UE6 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC13.14□□□□□ -0.31
LRRTM1Q86UE6 GRAMD4-202ENST00000406902 4484 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
LRRTM1Q86UE6 SLC4A11-202ENST00000380059 3229 ntAPPRIS ALT2 TSL 2 BASIC13.14□□□□□ -0.31
LRRTM1Q86UE6 TACR2-201ENST00000373306 2083 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
LRRTM1Q86UE6 CRACR2A-201ENST00000252322 2186 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
LRRTM1Q86UE6 TNFRSF11A-205ENST00000616710 3809 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
LRRTM1Q86UE6 HIST3H2BB-201ENST00000620438 2364 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
LRRTM1Q86UE6 GGT5-202ENST00000327365 2494 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
LRRTM1Q86UE6 TMEM143-201ENST00000293261 2560 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
LRRTM1Q86UE6 NFATC4-207ENST00000553469 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
LRRTM1Q86UE6 SLC43A2-201ENST00000301335 8136 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
LRRTM1Q86UE6 ARHGEF7-201ENST00000218789 5233 ntTSL 5 BASIC13.14□□□□□ -0.31
LRRTM1Q86UE6 NR3C1-201ENST00000231509 3556 ntAPPRIS ALT1 TSL 1 (best) BASIC13.14□□□□□ -0.31
LRRTM1Q86UE6 RBM6-201ENST00000266022 3750 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
LRRTM1Q86UE6 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 83.6 ms