Protein–RNA interactions for Protein: Q71RC9

SMIM5, Small integral membrane protein 5, humanhuman

Predictions only

Length 77 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM5Q71RC9 AL513327.1-206ENST00000587696 1432 ntTSL 5 BASIC18.71■□□□□ 0.59
SMIM5Q71RC9 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SMIM5Q71RC9 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SMIM5Q71RC9 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SMIM5Q71RC9 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC18.71■□□□□ 0.59
SMIM5Q71RC9 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.58
SMIM5Q71RC9 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
SMIM5Q71RC9 CNTNAP2-225ENST00000639247 2064 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
SMIM5Q71RC9 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
SMIM5Q71RC9 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
SMIM5Q71RC9 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC18.7■□□□□ 0.58
SMIM5Q71RC9 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SMIM5Q71RC9 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SMIM5Q71RC9 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SMIM5Q71RC9 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC18.7■□□□□ 0.58
SMIM5Q71RC9 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
SMIM5Q71RC9 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SMIM5Q71RC9 PPM1N-201ENST00000396735 895 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
SMIM5Q71RC9 IFI35-203ENST00000415816 1241 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
SMIM5Q71RC9 SLC13A3-205ENST00000417157 876 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
SMIM5Q71RC9 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC18.7■□□□□ 0.58
SMIM5Q71RC9 LINC00431-201ENST00000440735 1189 ntTSL 5 BASIC18.7■□□□□ 0.58
SMIM5Q71RC9 AL096772.1-201ENST00000451135 781 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
SMIM5Q71RC9 PPM1N-208ENST00000456399 618 ntTSL 3 BASIC18.7■□□□□ 0.58
SMIM5Q71RC9 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
SMIM5Q71RC9 KRT8P31-201ENST00000504812 1408 ntBASIC18.7■□□□□ 0.58
SMIM5Q71RC9 AC105254.1-201ENST00000507782 621 ntTSL 4 BASIC18.7■□□□□ 0.58
SMIM5Q71RC9 AC084752.1-201ENST00000509766 622 ntBASIC18.7■□□□□ 0.58
SMIM5Q71RC9 CYB561D1-207ENST00000527072 892 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
SMIM5Q71RC9 NDUFC1-209ENST00000539002 1198 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
SMIM5Q71RC9 NDUFC1-211ENST00000544855 1257 ntAPPRIS P1 TSL 3 BASIC18.7■□□□□ 0.58
SMIM5Q71RC9 AL132709.1-203ENST00000555103 569 ntTSL 4 BASIC18.7■□□□□ 0.58
SMIM5Q71RC9 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SMIM5Q71RC9 HKR1-225ENST00000592168 566 ntTSL 4 BASIC18.7■□□□□ 0.58
SMIM5Q71RC9 AC008758.6-201ENST00000598753 588 ntAPPRIS P1 TSL 4 BASIC18.7■□□□□ 0.58
SMIM5Q71RC9 BX088702.1-201ENST00000610784 235 ntBASIC18.7■□□□□ 0.58
SMIM5Q71RC9 HIST1H3F-201ENST00000618052 411 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
SMIM5Q71RC9 Z84468.1-201ENST00000626321 1408 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
SMIM5Q71RC9 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC18.7■□□□□ 0.58
SMIM5Q71RC9 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SMIM5Q71RC9 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC18.7■□□□□ 0.58
SMIM5Q71RC9 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
SMIM5Q71RC9 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC18.7■□□□□ 0.58
SMIM5Q71RC9 NTM-205ENST00000425719 1607 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
SMIM5Q71RC9 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SMIM5Q71RC9 TEX264-201ENST00000341333 1340 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
SMIM5Q71RC9 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SMIM5Q71RC9 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
SMIM5Q71RC9 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SMIM5Q71RC9 CD1E-206ENST00000368161 1689 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
SMIM5Q71RC9 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
SMIM5Q71RC9 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SMIM5Q71RC9 AL513523.2-202ENST00000427283 2040 ntBASIC18.69■□□□□ 0.58
SMIM5Q71RC9 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SMIM5Q71RC9 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC18.69■□□□□ 0.58
SMIM5Q71RC9 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
SMIM5Q71RC9 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
SMIM5Q71RC9 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SMIM5Q71RC9 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC18.69■□□□□ 0.58
SMIM5Q71RC9 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
SMIM5Q71RC9 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC18.69■□□□□ 0.58
SMIM5Q71RC9 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SMIM5Q71RC9 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SMIM5Q71RC9 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
SMIM5Q71RC9 C7orf61-201ENST00000332375 1004 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SMIM5Q71RC9 HFE-203ENST00000336625 804 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
SMIM5Q71RC9 CCDC167-201ENST00000373408 619 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SMIM5Q71RC9 PRTFDC1-202ENST00000376376 741 ntTSL 2 BASIC18.69■□□□□ 0.58
SMIM5Q71RC9 AL672291.1-201ENST00000417047 462 ntTSL 3 BASIC18.69■□□□□ 0.58
SMIM5Q71RC9 AL365436.2-201ENST00000434112 526 ntTSL 4 BASIC18.69■□□□□ 0.58
SMIM5Q71RC9 LINC00211-203ENST00000446799 662 ntTSL 3 BASIC18.69■□□□□ 0.58
SMIM5Q71RC9 OR2T27-202ENST00000460972 1136 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
SMIM5Q71RC9 IFITM1-204ENST00000528780 730 ntAPPRIS P1 TSL 3 BASIC18.69■□□□□ 0.58
SMIM5Q71RC9 POLD4-206ENST00000530584 899 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
SMIM5Q71RC9 AP000911.2-201ENST00000534330 502 ntBASIC18.69■□□□□ 0.58
SMIM5Q71RC9 TCL1A-205ENST00000555202 717 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SMIM5Q71RC9 AC027237.1-201ENST00000560942 655 ntBASIC18.69■□□□□ 0.58
SMIM5Q71RC9 RN7SL596P-201ENST00000582123 288 ntBASIC18.69■□□□□ 0.58
SMIM5Q71RC9 EIF5AP2-201ENST00000585668 1047 ntBASIC18.69■□□□□ 0.58
SMIM5Q71RC9 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC18.69■□□□□ 0.58
SMIM5Q71RC9 RPS10-207ENST00000621356 784 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
SMIM5Q71RC9 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SMIM5Q71RC9 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SMIM5Q71RC9 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
SMIM5Q71RC9 USP4-203ENST00000415188 1454 ntTSL 3 BASIC18.69■□□□□ 0.58
SMIM5Q71RC9 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC18.69■□□□□ 0.58
SMIM5Q71RC9 ZNF619-201ENST00000314686 2233 ntTSL 2 BASIC18.69■□□□□ 0.58
SMIM5Q71RC9 CD48-203ENST00000613788 1500 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
SMIM5Q71RC9 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
SMIM5Q71RC9 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SMIM5Q71RC9 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC18.69■□□□□ 0.58
SMIM5Q71RC9 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC18.69■□□□□ 0.58
SMIM5Q71RC9 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SMIM5Q71RC9 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
SMIM5Q71RC9 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SMIM5Q71RC9 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
SMIM5Q71RC9 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SMIM5Q71RC9 AL391005.1-201ENST00000623953 2435 ntBASIC18.68■□□□□ 0.58
SMIM5Q71RC9 LINC00278-201ENST00000425031 528 ntTSL 2 BASIC18.68■□□□□ 0.58
SMIM5Q71RC9 AZGP1P1-202ENST00000425474 1181 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms